Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:50:08 (17421): wrapper (7.7.26015): starting
14:50:08 (17421): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 14:50:08] Arguments: --nthreads 8
[2025-10-07 14:50:08] Threads: 8
[2025-10-07 14:50:08] Checking for CVMFS
[2025-10-07 14:50:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 14:50:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 14:50:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 14:50:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 14:50:08] 2.11.2.0 28705 46225 115200 151444 0 59 15010106 18432000 1833 130560 0 38583609 99.971 2032524 37984 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 14:50:08] CVMFS is ok
[2025-10-07 14:50:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 14:50:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 14:50:08] Further information can be found at the LHC@home message board.
[2025-10-07 14:50:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 14:50:08] Checking for apptainer binary...
[2025-10-07 14:50:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 14:50:08] Running /usr/bin/apptainer --version
[2025-10-07 14:50:08] apptainer version 1.3.2-1.el7
[2025-10-07 14:50:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 14:50:09] c-206-27.aglt2.org
[2025-10-07 14:50:09] apptainer works
[2025-10-07 14:50:09] Set ATHENA_PROC_NUMBER=8
[2025-10-07 14:50:09] Set ATHENA_CORE_NUMBER=8
[2025-10-07 14:50:09] Starting ATLAS job with PandaID=6831734670
[2025-10-07 14:50:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 17:28:42]  *** The last 200 lines of the pilot log: ***
[2025-10-07 17:28:42] 2025-10-07 21:27:57,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 17:28:42] 2025-10-07 21:27:57,330 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 17:28:42] 2025-10-07 21:27:57,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 17:28:42] 2025-10-07 21:27:57,333 | INFO     | fitting pss+swap vs Time
[2025-10-07 17:28:42] 2025-10-07 21:27:57,333 | INFO     | sum of square deviations: 1154663510.0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,334 | INFO     | sum of deviations: 954703741.0000019
[2025-10-07 17:28:42] 2025-10-07 21:27:57,334 | INFO     | mean x: 1759867743.0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,334 | INFO     | mean y: 2458139.7677419353
[2025-10-07 17:28:42] 2025-10-07 21:27:57,334 | INFO     | -- intersect: -1452643111.2515528
[2025-10-07 17:28:42] 2025-10-07 21:27:57,334 | INFO     | intersect: -1452643111.2515528
[2025-10-07 17:28:42] 2025-10-07 21:27:57,335 | INFO     | chi2: 2.2723715665071413
[2025-10-07 17:28:42] 2025-10-07 21:27:57,335 | INFO     | sum of square deviations: 1046484737.5
[2025-10-07 17:28:42] 2025-10-07 21:27:57,336 | INFO     | sum of deviations: 11358674458.000011
[2025-10-07 17:28:42] 2025-10-07 21:27:57,336 | INFO     | mean x: 1759867590.5
[2025-10-07 17:28:42] 2025-10-07 21:27:57,336 | INFO     | mean y: 2472413.7066666665
[2025-10-07 17:28:42] 2025-10-07 21:27:57,336 | INFO     | -- intersect: -19099347549.218857
[2025-10-07 17:28:42] 2025-10-07 21:27:57,336 | INFO     | intersect: -19099347549.218857
[2025-10-07 17:28:42] 2025-10-07 21:27:57,336 | INFO     | chi2: 1.4251625838478523
[2025-10-07 17:28:42] 2025-10-07 21:27:57,336 | INFO     | current chi2=1.4251625838478523 (change=37.283030431573856 %)
[2025-10-07 17:28:42] 2025-10-07 21:27:57,337 | INFO     | sum of square deviations: 945282840.0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,337 | INFO     | sum of deviations: 10962135418.000011
[2025-10-07 17:28:42] 2025-10-07 21:27:57,337 | INFO     | mean x: 1759867438.0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,338 | INFO     | mean y: 2471816.8206896554
[2025-10-07 17:28:42] 2025-10-07 21:27:57,338 | INFO     | -- intersect: -20406134323.839535
[2025-10-07 17:28:42] 2025-10-07 21:27:57,338 | INFO     | intersect: -20406134323.839535
[2025-10-07 17:28:42] 2025-10-07 21:27:57,338 | INFO     | chi2: 1.4267057266422134
[2025-10-07 17:28:42] 2025-10-07 21:27:57,338 | INFO     | current chi2=1.4267057266422134 (change=-0.1082783685068887 %)
[2025-10-07 17:28:42] 2025-10-07 21:27:57,338 | INFO     | right removable region: 144
[2025-10-07 17:28:42] 2025-10-07 21:27:57,338 | INFO     | sum of square deviations: 1046484737.5
[2025-10-07 17:28:42] 2025-10-07 21:27:57,339 | INFO     | sum of deviations: -20215236276.0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,339 | INFO     | mean x: 1759867895.5
[2025-10-07 17:28:42] 2025-10-07 21:27:57,339 | INFO     | mean y: 2487502.6266666665
[2025-10-07 17:28:42] 2025-10-07 21:27:57,339 | INFO     | -- intersect: 33998344343.37622
[2025-10-07 17:28:42] 2025-10-07 21:27:57,340 | INFO     | intersect: 33998344343.37622
[2025-10-07 17:28:42] 2025-10-07 21:27:57,340 | INFO     | chi2: 0.9518089131388314
[2025-10-07 17:28:42] 2025-10-07 21:27:57,340 | INFO     | current chi2=0.9518089131388314 (change=58.11385219003354 %)
[2025-10-07 17:28:42] 2025-10-07 21:27:57,340 | INFO     | sum of square deviations: 945282840.0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,341 | INFO     | sum of deviations: -18252220469.0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,341 | INFO     | mean x: 1759868048.0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,341 | INFO     | mean y: 2484466.9931034483
[2025-10-07 17:28:42] 2025-10-07 21:27:57,341 | INFO     | -- intersect: 33983318825.992657
[2025-10-07 17:28:42] 2025-10-07 21:27:57,341 | INFO     | intersect: 33983318825.992657
[2025-10-07 17:28:42] 2025-10-07 21:27:57,341 | INFO     | chi2: 0.9376474675352321
[2025-10-07 17:28:42] 2025-10-07 21:27:57,342 | INFO     | current chi2=0.9376474675352321 (change=1.4878454496605176 %)
[2025-10-07 17:28:42] 2025-10-07 21:27:57,342 | INFO     | left removable region: 20
[2025-10-07 17:28:42] 2025-10-07 21:27:57,342 | INFO     | sum of square deviations: 591173875.0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,342 | INFO     | sum of deviations: -276089019.5
[2025-10-07 17:28:42] 2025-10-07 21:27:57,342 | INFO     | mean x: 1759868017.5
[2025-10-07 17:28:42] 2025-10-07 21:27:57,343 | INFO     | mean y: 2486868.556451613
[2025-10-07 17:28:42] 2025-10-07 21:27:57,343 | INFO     | -- intersect: 824377442.46076
[2025-10-07 17:28:42] 2025-10-07 21:27:57,343 | INFO     | intersect: 824377442.46076
[2025-10-07 17:28:42] 2025-10-07 21:27:57,343 | INFO     | chi2: 0.011134143158450665
[2025-10-07 17:28:42] 2025-10-07 21:27:57,343 | INFO     | -- intersect: 824377442.46076
[2025-10-07 17:28:42] 2025-10-07 21:27:57,343 | INFO     | current memory leak: -0.47 B/s (using 124 data points, chi2=0.01)
[2025-10-07 17:28:42] 2025-10-07 21:27:57,344 | INFO     | could have reported an average CPU frequency of 2564 MHz (9 samples)
[2025-10-07 17:28:42] 2025-10-07 21:27:57,344 | INFO     | ..............................
[2025-10-07 17:28:42] 2025-10-07 21:27:57,344 | INFO     | . Timing measurements:
[2025-10-07 17:28:42] 2025-10-07 21:27:57,344 | INFO     | . get job = 0 s
[2025-10-07 17:28:42] 2025-10-07 21:27:57,344 | INFO     | . initial setup = 2 s
[2025-10-07 17:28:42] 2025-10-07 21:27:57,344 | INFO     | . payload setup = 5 s
[2025-10-07 17:28:42] 2025-10-07 21:27:57,344 | INFO     | . stage-in = 0 s
[2025-10-07 17:28:42] 2025-10-07 21:27:57,344 | INFO     | . payload execution = 9422 s
[2025-10-07 17:28:42] 2025-10-07 21:27:57,344 | INFO     | . stage-out = 0 s
[2025-10-07 17:28:42] 2025-10-07 21:27:57,345 | INFO     | . log creation = 0 s
[2025-10-07 17:28:42] 2025-10-07 21:27:57,345 | INFO     | ..............................
[2025-10-07 17:28:42] 2025-10-07 21:27:57,438 | INFO     | 
[2025-10-07 17:28:42] 2025-10-07 21:27:57,439 | INFO     | job summary report
[2025-10-07 17:28:42] 2025-10-07 21:27:57,439 | INFO     | --------------------------------------------------
[2025-10-07 17:28:42] 2025-10-07 21:27:57,439 | INFO     | PanDA job id: 6831734670
[2025-10-07 17:28:42] 2025-10-07 21:27:57,439 | INFO     | task id: 46376905
[2025-10-07 17:28:42] 2025-10-07 21:27:57,439 | INFO     | errors: (none)
[2025-10-07 17:28:42] 2025-10-07 21:27:57,439 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 17:28:42] 2025-10-07 21:27:57,439 | INFO     | pilot state: finished 
[2025-10-07 17:28:42] 2025-10-07 21:27:57,439 | INFO     | transexitcode: 0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,439 | INFO     | exeerrorcode: 0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,439 | INFO     | exeerrordiag: 
[2025-10-07 17:28:42] 2025-10-07 21:27:57,440 | INFO     | exitcode: 0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,440 | INFO     | exitmsg: OK
[2025-10-07 17:28:42] 2025-10-07 21:27:57,440 | INFO     | cpuconsumptiontime: 70705 s
[2025-10-07 17:28:42] 2025-10-07 21:27:57,440 | INFO     | nevents: 400
[2025-10-07 17:28:42] 2025-10-07 21:27:57,440 | INFO     | neventsw: 0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,440 | INFO     | pid: 27618
[2025-10-07 17:28:42] 2025-10-07 21:27:57,440 | INFO     | pgrp: 27618
[2025-10-07 17:28:42] 2025-10-07 21:27:57,440 | INFO     | corecount: 8
[2025-10-07 17:28:42] 2025-10-07 21:27:57,440 | INFO     | event service: False
[2025-10-07 17:28:42] 2025-10-07 21:27:57,440 | INFO     | sizes: {0: 2348645, 1: 2348844, 5: 2349106, 12: 2349162, 9431: 2377624, 9432: 2377623, 9434: 2386805, 9437: 2386861, 9442: 2387119}
[2025-10-07 17:28:42] 2025-10-07 21:27:57,441 | INFO     | --------------------------------------------------
[2025-10-07 17:28:42] 2025-10-07 21:27:57,441 | INFO     | 
[2025-10-07 17:28:42] 2025-10-07 21:27:57,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 17:28:42] 2025-10-07 21:27:57,453 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,454 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,454 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,454 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,456 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,457 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 17:28:42] 2025-10-07 21:27:57,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,457 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 17:28:42] 2025-10-07 21:27:57,457 | INFO     | job 6831734670 has completed (purged errors)
[2025-10-07 17:28:42] 2025-10-07 21:27:57,458 | INFO     | overall cleanup function is called
[2025-10-07 17:28:42] 2025-10-07 21:27:58,466 | INFO     | --- collectZombieJob: --- 10, [27618]
[2025-10-07 17:28:42] 2025-10-07 21:27:58,466 | INFO     | zombie collector waiting for pid 27618
[2025-10-07 17:28:42] 2025-10-07 21:27:58,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 17:28:42] 2025-10-07 21:27:58,466 | INFO     | collected zombie processes
[2025-10-07 17:28:42] 2025-10-07 21:27:58,467 | INFO     | will attempt to kill all subprocesses of pid=27618
[2025-10-07 17:28:42] 2025-10-07 21:27:58,634 | INFO     | process IDs to be killed: [27618] (in reverse order)
[2025-10-07 17:28:42] 2025-10-07 21:27:58,690 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 17:28:42] 2025-10-07 21:27:58,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 17:28:42] 2025-10-07 21:27:58,695 | INFO     | did not find any defunct processes belonging to 27618
[2025-10-07 17:28:42] 2025-10-07 21:27:58,700 | INFO     | did not find any defunct processes belonging to 27618
[2025-10-07 17:28:42] 2025-10-07 21:27:58,700 | INFO     | ready for new job
[2025-10-07 17:28:42] 2025-10-07 21:27:58,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 17:28:42] 2025-10-07 21:27:58,702 | INFO     | ***************************************
[2025-10-07 17:28:42] 2025-10-07 21:27:58,702 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 17:28:42] 2025-10-07 21:27:58,702 | INFO     | ***************************************
[2025-10-07 17:28:42] 2025-10-07 21:27:58,703 | INFO     | 
[2025-10-07 17:28:42] 2025-10-07 21:27:58,704 | INFO     | architecture information:
[2025-10-07 17:28:42] 2025-10-07 21:27:58,704 | INFO     | executing command: cat /etc/os-release
[2025-10-07 17:28:42] 2025-10-07 21:27:58,719 | INFO     | cat /etc/os-release:
[2025-10-07 17:28:42] NAME="CentOS Linux"
[2025-10-07 17:28:42] VERSION="7 (Core)"
[2025-10-07 17:28:42] ID="centos"
[2025-10-07 17:28:42] ID_LIKE="rhel fedora"
[2025-10-07 17:28:42] VERSION_ID="7"
[2025-10-07 17:28:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 17:28:42] ANSI_COLOR="0;31"
[2025-10-07 17:28:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 17:28:42] HOME_URL="https://www.centos.org/"
[2025-10-07 17:28:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 17:28:42] 
[2025-10-07 17:28:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 17:28:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 17:28:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 17:28:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 17:28:42] 
[2025-10-07 17:28:42] 2025-10-07 21:27:58,719 | INFO     | ***************************************
[2025-10-07 17:28:42] 2025-10-07 21:27:59,222 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 17:28:42] 2025-10-07 21:27:59,239 | INFO     | sufficient remaining disk space (28387049472 B)
[2025-10-07 17:28:42] 2025-10-07 21:27:59,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 17:28:42] 2025-10-07 21:27:59,240 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 17:28:42] 2025-10-07 21:27:59,240 | INFO     | update_server=False
[2025-10-07 17:28:42] 2025-10-07 21:27:59,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 17:28:42] 2025-10-07 21:27:59,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 17:28:42] 2025-10-07 21:27:59,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 17:28:42] 2025-10-07 21:27:59,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 17:28:42] 2025-10-07 21:27:59,365 | INFO     | aborting loop
[2025-10-07 17:28:42] 2025-10-07 21:27:59,577 | INFO     | all data control threads have been joined
[2025-10-07 17:28:42] 2025-10-07 21:28:00,242 | INFO     | [job] queue monitor thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:00,246 | INFO     | [job] retrieve thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:00,321 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:00,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 17:28:42] 2025-10-07 21:28:00,371 | INFO     | [job] job monitor thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:00,375 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:00,393 | INFO     | all payload control threads have been joined
[2025-10-07 17:28:42] 2025-10-07 21:28:00,497 | INFO     | [job] validate thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:00,582 | INFO     | [data] control thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:00,628 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:00,638 | INFO     | [payload] failed_post thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:00,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:00,905 | INFO     | all job control threads have been joined
[2025-10-07 17:28:42] 2025-10-07 21:28:01,333 | INFO     | [payload] validate_post thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:01,398 | INFO     | [payload] control thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:01,610 | INFO     | [data] copytool_in thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:01,910 | INFO     | [job] control thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:02,344 | INFO     | [data] copytool_out thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:03,246 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 17:28:42] 2025-10-07 21:28:29,994 | INFO     | PID=21130 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 17:28:42] 2025-10-07 21:28:29,994 | INFO     | .. there are 3 such processes running
[2025-10-07 17:28:42] 2025-10-07 21:28:29,995 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 17:28:42] 2025-10-07 21:28:29,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 17:28:42] 2025-10-07 21:28:29,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 17:28:42] 2025-10-07 21:28:35,686 | INFO     | [monitor] cgroup control has ended
[2025-10-07 17:28:42] 2025-10-07 21:28:37,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421501982528)>', '<ExcThread(monitor, started 140420927448832)>']
[2025-10-07 17:28:42] 2025-10-07 21:28:38,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 17:28:42] 2025-10-07 21:28:38,035 | INFO     | [monitor] control thread has ended
[2025-10-07 17:28:42] 2025-10-07 21:28:42,329 | INFO     | all workflow threads have been joined
[2025-10-07 17:28:42] 2025-10-07 21:28:42,329 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 17:28:42] 2025-10-07 21:28:42,330 | INFO     | traces error code: 0
[2025-10-07 17:28:42] 2025-10-07 21:28:42,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 17:28:42] 2025-10-07 21:28:42,453 [wrapper] ==== pilot stdout END ====
[2025-10-07 17:28:42] 2025-10-07 21:28:42,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 17:28:42] 2025-10-07 21:28:42,457 [wrapper] pilotpid: 21130
[2025-10-07 17:28:42] 2025-10-07 21:28:42,459 [wrapper] Pilot exit status: 0
[2025-10-07 17:28:42] 2025-10-07 21:28:42,468 [wrapper] pandaids: 6831734670
[2025-10-07 17:28:42] 2025-10-07 21:28:42,508 [wrapper] cleanup supervisor_pilot 27487 21131
[2025-10-07 17:28:42] 2025-10-07 21:28:42,510 [wrapper] Test setup, not cleaning
[2025-10-07 17:28:42] 2025-10-07 21:28:42,513 [wrapper] apfmon messages muted
[2025-10-07 17:28:42] 2025-10-07 21:28:42,515 [wrapper] ==== wrapper stdout END ====
[2025-10-07 17:28:42] 2025-10-07 21:28:42,516 [wrapper] ==== wrapper stderr END ====
[2025-10-07 17:28:42]  *** Error codes and diagnostics ***
[2025-10-07 17:28:42]     "exeErrorCode": 0,
[2025-10-07 17:28:42]     "exeErrorDiag": "",
[2025-10-07 17:28:42]     "pilotErrorCode": 0,
[2025-10-07 17:28:42]     "pilotErrorDiag": "",
[2025-10-07 17:28:42]  *** Listing of results directory ***
[2025-10-07 17:28:42] total 392404
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas    552446 Oct  5 10:46 pilot3.tar.gz
[2025-10-07 17:28:42] -rwx------ 1 boincer umatlas     36292 Oct  5 10:50 runpilot2-wrapper.sh
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas      5112 Oct  5 10:50 queuedata.json
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas       100 Oct  7 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 17:28:42] -rwxr-xr-x 1 boincer umatlas      7986 Oct  7 14:50 run_atlas
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas       105 Oct  7 14:50 job.xml
[2025-10-07 17:28:42] -rw-r--r-- 2 boincer umatlas 212382657 Oct  7 14:50 EVNT.46376901._003211.pool.root.1
[2025-10-07 17:28:42] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 14:50 start_atlas.sh
[2025-10-07 17:28:42] drwxrwx--x 2 boincer umatlas      4096 Oct  7 14:50 shared
[2025-10-07 17:28:42] -rw-r--r-- 2 boincer umatlas    565598 Oct  7 14:50 input.tar.gz
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas         0 Oct  7 14:50 boinc_lockfile
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas      2519 Oct  7 14:50 pandaJob.out
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas    977512 Oct  7 14:50 agis_schedconf.cvmfs.json
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas   1560401 Oct  7 14:50 agis_ddmendpoints.agis.ALL.json
[2025-10-07 17:28:42] drwx------ 4 boincer umatlas      4096 Oct  7 14:50 pilot3
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas 182107012 Oct  7 17:27 HITS.46376905._087392.pool.root.1
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas       529 Oct  7 17:27 boinc_task_state.xml
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas      1053 Oct  7 17:27 memory_monitor_summary.json
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas    395907 Oct  7 17:27 log.46376905._087392.job.log.tgz.1
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas      7850 Oct  7 17:27 heartbeat.json
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas      5950 Oct  7 17:28 init_data.xml
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas        95 Oct  7 17:28 pilot_heartbeat.json
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas      8192 Oct  7 17:28 boinc_mmap_file
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas        27 Oct  7 17:28 wrapper_checkpoint.txt
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas      4821 Oct  7 17:28 pilotlog.txt
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas   1329013 Oct  7 17:28 log.46376905._087392.job.log.1
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas       357 Oct  7 17:28 output.list
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas       620 Oct  7 17:28 runtime_log
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas   1740800 Oct  7 17:28 result.tar.gz
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas      8703 Oct  7 17:28 runtime_log.err
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas       658 Oct  7 17:28 o6JMDmdFfP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaaGMDmNg91Go.diag
[2025-10-07 17:28:42] -rw-r--r-- 1 boincer umatlas     20880 Oct  7 17:28 stderr.txt
[2025-10-07 17:28:42] HITS file was successfully produced:
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas 182107012 Oct  7 17:27 shared/HITS.pool.root.1
[2025-10-07 17:28:42]  *** Contents of shared directory: ***
[2025-10-07 17:28:42] total 387524
[2025-10-07 17:28:42] -rw-r--r-- 2 boincer umatlas 212382657 Oct  7 14:50 ATLAS.root_0
[2025-10-07 17:28:42] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 14:50 start_atlas.sh
[2025-10-07 17:28:42] -rw-r--r-- 2 boincer umatlas    565598 Oct  7 14:50 input.tar.gz
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas 182107012 Oct  7 17:27 HITS.pool.root.1
[2025-10-07 17:28:42] -rw------- 1 boincer umatlas   1740800 Oct  7 17:28 result.tar.gz
17:28:44 (17421): run_atlas exited; CPU time 70826.436394
17:28:44 (17421): called boinc_finish(0)

</stderr_txt>
]]>

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