Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:54:37 (7003): wrapper (7.7.26015): starting
03:54:37 (7003): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 03:54:37] Arguments: --nthreads 8
[2025-10-08 03:54:37] Threads: 8
[2025-10-08 03:54:37] Checking for CVMFS
[2025-10-08 03:54:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 03:54:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 03:54:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 03:54:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 03:54:40] 2.11.2.0 16160 214033 135916 151453 2 61 21408173 25165825 4632 130560 0 114793592 99.879 64193112 3249 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-08 03:54:40] CVMFS is ok
[2025-10-08 03:54:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 03:54:40] Checking for apptainer binary...
[2025-10-08 03:54:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 03:54:40] Running /usr/bin/apptainer --version
[2025-10-08 03:54:40] apptainer version 1.3.2-1.el7
[2025-10-08 03:54:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 03:54:52] cg-vwn457.simple-grid.lan
[2025-10-08 03:54:52] apptainer works
[2025-10-08 03:54:52] Set ATHENA_PROC_NUMBER=8
[2025-10-08 03:54:52] Set ATHENA_CORE_NUMBER=8
[2025-10-08 03:54:52] Starting ATLAS job with PandaID=6834867117
[2025-10-08 03:54:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 07:27:42]  *** The last 200 lines of the pilot log: ***
[2025-10-08 07:27:42] 2025-10-08 05:26:29,608 | INFO     | sum of square deviations: 2334722845.0
[2025-10-08 07:27:42] 2025-10-08 05:26:29,609 | INFO     | sum of deviations: 71945993720.0
[2025-10-08 07:27:42] 2025-10-08 05:26:29,610 | INFO     | mean x: 1759895110.5
[2025-10-08 07:27:42] 2025-10-08 05:26:29,610 | INFO     | mean y: 2408224.6530612246
[2025-10-08 07:27:42] 2025-10-08 05:26:29,610 | INFO     | -- intersect: -54229897266.79027
[2025-10-08 07:27:42] 2025-10-08 05:26:29,610 | INFO     | intersect: -54229897266.79027
[2025-10-08 07:27:42] 2025-10-08 05:26:29,610 | INFO     | chi2: 5.446139024556459
[2025-10-08 07:27:42] 2025-10-08 05:26:29,611 | INFO     | sum of square deviations: 2160561440.0
[2025-10-08 07:27:42] 2025-10-08 05:26:29,612 | INFO     | sum of deviations: 82574351046.00002
[2025-10-08 07:27:42] 2025-10-08 05:26:29,612 | INFO     | mean x: 1759894958.0
[2025-10-08 07:27:42] 2025-10-08 05:26:29,613 | INFO     | mean y: 2417298.1413612566
[2025-10-08 07:27:42] 2025-10-08 05:26:29,613 | INFO     | -- intersect: -67258888664.06143
[2025-10-08 07:27:42] 2025-10-08 05:26:29,613 | INFO     | intersect: -67258888664.06143
[2025-10-08 07:27:42] 2025-10-08 05:26:29,613 | INFO     | chi2: 4.71765658011884
[2025-10-08 07:27:42] 2025-10-08 05:26:29,613 | INFO     | current chi2=4.71765658011884 (change=13.376126484339013 %)
[2025-10-08 07:27:42] 2025-10-08 05:26:29,613 | INFO     | right removable region: 190
[2025-10-08 07:27:42] 2025-10-08 05:26:29,614 | INFO     | sum of square deviations: 2160561440.0
[2025-10-08 07:27:42] 2025-10-08 05:26:29,615 | INFO     | sum of deviations: 9015119728.000004
[2025-10-08 07:27:42] 2025-10-08 05:26:29,616 | INFO     | mean x: 1759895263.0
[2025-10-08 07:27:42] 2025-10-08 05:26:29,616 | INFO     | mean y: 2463232.87434555
[2025-10-08 07:27:42] 2025-10-08 05:26:29,616 | INFO     | -- intersect: -7340844025.578372
[2025-10-08 07:27:42] 2025-10-08 05:26:29,616 | INFO     | intersect: -7340844025.578372
[2025-10-08 07:27:42] 2025-10-08 05:26:29,616 | INFO     | chi2: 1.26446740657987
[2025-10-08 07:27:42] 2025-10-08 05:26:29,616 | INFO     | current chi2=1.26446740657987 (change=76.7823149413111 %)
[2025-10-08 07:27:42] 2025-10-08 05:26:29,617 | INFO     | sum of square deviations: 1995283922.5
[2025-10-08 07:27:42] 2025-10-08 05:26:29,618 | INFO     | sum of deviations: -7065227186.5
[2025-10-08 07:27:42] 2025-10-08 05:26:29,618 | INFO     | mean x: 1759895415.5
[2025-10-08 07:27:42] 2025-10-08 05:26:29,618 | INFO     | mean y: 2477879.639784946
[2025-10-08 07:27:42] 2025-10-08 05:26:29,619 | INFO     | -- intersect: 6234202996.438201
[2025-10-08 07:27:42] 2025-10-08 05:26:29,619 | INFO     | intersect: 6234202996.438201
[2025-10-08 07:27:42] 2025-10-08 05:26:29,619 | INFO     | chi2: 0.7987228646438285
[2025-10-08 07:27:42] 2025-10-08 05:26:29,619 | INFO     | current chi2=0.7987228646438285 (change=36.83325797979932 %)
[2025-10-08 07:27:42] 2025-10-08 05:26:29,620 | INFO     | sum of square deviations: 1838657730.0
[2025-10-08 07:27:42] 2025-10-08 05:26:29,621 | INFO     | sum of deviations: -7636556632.999999
[2025-10-08 07:27:42] 2025-10-08 05:26:29,621 | INFO     | mean x: 1759895568.0
[2025-10-08 07:27:42] 2025-10-08 05:26:29,621 | INFO     | mean y: 2478452.182320442
[2025-10-08 07:27:42] 2025-10-08 05:26:29,621 | INFO     | -- intersect: 7311909649.6883955
[2025-10-08 07:27:42] 2025-10-08 05:26:29,621 | INFO     | intersect: 7311909649.6883955
[2025-10-08 07:27:42] 2025-10-08 05:26:29,622 | INFO     | chi2: 0.7946722997173925
[2025-10-08 07:27:42] 2025-10-08 05:26:29,622 | INFO     | current chi2=0.7946722997173925 (change=0.5071302082033441 %)
[2025-10-08 07:27:42] 2025-10-08 05:26:29,622 | INFO     | left removable region: 30
[2025-10-08 07:27:42] 2025-10-08 05:26:29,622 | INFO     | sum of square deviations: 1270051720.0
[2025-10-08 07:27:42] 2025-10-08 05:26:29,623 | INFO     | sum of deviations: 2030971118.5
[2025-10-08 07:27:42] 2025-10-08 05:26:29,623 | INFO     | mean x: 1759895842.5
[2025-10-08 07:27:42] 2025-10-08 05:26:29,623 | INFO     | mean y: 2492587.91875
[2025-10-08 07:27:42] 2025-10-08 05:26:29,624 | INFO     | -- intersect: -2811800382.516915
[2025-10-08 07:27:42] 2025-10-08 05:26:29,624 | INFO     | intersect: -2811800382.516915
[2025-10-08 07:27:42] 2025-10-08 05:26:29,624 | INFO     | chi2: 0.00021825375968205098
[2025-10-08 07:27:42] 2025-10-08 05:26:29,624 | INFO     | -- intersect: -2811800382.516915
[2025-10-08 07:27:42] 2025-10-08 05:26:29,624 | INFO     | current memory leak: 1.60 B/s (using 160 data points, chi2=0.00)
[2025-10-08 07:27:42] 2025-10-08 05:26:29,625 | INFO     | could have reported an average CPU frequency of 2250 MHz (10 samples)
[2025-10-08 07:27:42] 2025-10-08 05:26:29,625 | INFO     | ..............................
[2025-10-08 07:27:42] 2025-10-08 05:26:29,625 | INFO     | . Timing measurements:
[2025-10-08 07:27:42] 2025-10-08 05:26:29,625 | INFO     | . get job = 0 s
[2025-10-08 07:27:42] 2025-10-08 05:26:29,625 | INFO     | . initial setup = 4 s
[2025-10-08 07:27:42] 2025-10-08 05:26:29,625 | INFO     | . payload setup = 122 s
[2025-10-08 07:27:42] 2025-10-08 05:26:29,626 | INFO     | . stage-in = 0 s
[2025-10-08 07:27:42] 2025-10-08 05:26:29,626 | INFO     | . payload execution = 12066 s
[2025-10-08 07:27:42] 2025-10-08 05:26:29,626 | INFO     | . stage-out = 6 s
[2025-10-08 07:27:42] 2025-10-08 05:26:29,626 | INFO     | . log creation = 1 s
[2025-10-08 07:27:42] 2025-10-08 05:26:29,626 | INFO     | ..............................
[2025-10-08 07:27:42] 2025-10-08 05:26:30,132 | INFO     | time since job start (12500s) is within the limit (172800.0s)
[2025-10-08 07:27:42] 2025-10-08 05:26:30,149 | INFO     | 
[2025-10-08 07:27:42] 2025-10-08 05:26:30,149 | INFO     | job summary report
[2025-10-08 07:27:42] 2025-10-08 05:26:30,149 | INFO     | --------------------------------------------------
[2025-10-08 07:27:42] 2025-10-08 05:26:30,149 | INFO     | PanDA job id: 6834867117
[2025-10-08 07:27:42] 2025-10-08 05:26:30,149 | INFO     | task id: 46376905
[2025-10-08 07:27:42] 2025-10-08 05:26:30,149 | INFO     | errors: (none)
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | pilot state: finished 
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | transexitcode: 0
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | exeerrorcode: 0
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | exeerrordiag: 
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | exitcode: 0
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | exitmsg: OK
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | cpuconsumptiontime: 45194 s
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | nevents: 400
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | neventsw: 0
[2025-10-08 07:27:42] 2025-10-08 05:26:30,150 | INFO     | pid: 17401
[2025-10-08 07:27:42] 2025-10-08 05:26:30,151 | INFO     | pgrp: 17401
[2025-10-08 07:27:42] 2025-10-08 05:26:30,151 | INFO     | corecount: 8
[2025-10-08 07:27:42] 2025-10-08 05:26:30,151 | INFO     | event service: False
[2025-10-08 07:27:42] 2025-10-08 05:26:30,151 | INFO     | sizes: {0: 2347942, 1: 2348799, 2: 2348799, 12: 2348827, 23: 2348855, 34: 2348883, 45: 2349039, 55: 2349067, 66: 2349095, 77: 2349123, 88: 2349179, 93: 2349749, 98
[2025-10-08 07:27:42] 2025-10-08 05:26:30,151 | INFO     | --------------------------------------------------
[2025-10-08 07:27:42] 2025-10-08 05:26:30,151 | INFO     | 
[2025-10-08 07:27:42] 2025-10-08 05:26:30,151 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-08 07:27:42] 2025-10-08 05:26:30,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,309 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 07:27:42] 2025-10-08 05:26:30,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 07:27:42] 2025-10-08 05:26:30,311 | INFO     | job 6834867117 has completed (purged errors)
[2025-10-08 07:27:42] 2025-10-08 05:26:30,311 | INFO     | overall cleanup function is called
[2025-10-08 07:27:42] 2025-10-08 05:26:31,320 | INFO     | --- collectZombieJob: --- 10, [17401]
[2025-10-08 07:27:42] 2025-10-08 05:26:31,320 | INFO     | zombie collector waiting for pid 17401
[2025-10-08 07:27:42] 2025-10-08 05:26:31,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 07:27:42] 2025-10-08 05:26:31,320 | INFO     | collected zombie processes
[2025-10-08 07:27:42] 2025-10-08 05:26:31,320 | INFO     | will attempt to kill all subprocesses of pid=17401
[2025-10-08 07:27:42] 2025-10-08 05:26:31,415 | INFO     | process IDs to be killed: [17401] (in reverse order)
[2025-10-08 07:27:42] 2025-10-08 05:26:32,216 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 07:27:42] 2025-10-08 05:26:32,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 07:27:42] 2025-10-08 05:26:32,219 | INFO     | did not find any defunct processes belonging to 17401
[2025-10-08 07:27:42] 2025-10-08 05:26:32,222 | INFO     | did not find any defunct processes belonging to 17401
[2025-10-08 07:27:42] 2025-10-08 05:26:32,223 | INFO     | ready for new job
[2025-10-08 07:27:42] 2025-10-08 05:26:32,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 07:27:42] 2025-10-08 05:26:32,225 | INFO     | ***************************************
[2025-10-08 07:27:42] 2025-10-08 05:26:32,225 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 07:27:42] 2025-10-08 05:26:32,225 | INFO     | ***************************************
[2025-10-08 07:27:42] 2025-10-08 05:26:32,225 | INFO     | 
[2025-10-08 07:27:42] 2025-10-08 05:26:32,226 | INFO     | pilot is running in a VM
[2025-10-08 07:27:42] 2025-10-08 05:26:32,226 | INFO     | architecture information:
[2025-10-08 07:27:42] 2025-10-08 05:26:32,238 | INFO     | executing command: cat /etc/os-release
[2025-10-08 07:27:42] 2025-10-08 05:26:32,538 | INFO     | cat /etc/os-release:
[2025-10-08 07:27:42] NAME="CentOS Linux"
[2025-10-08 07:27:42] VERSION="7 (Core)"
[2025-10-08 07:27:42] ID="centos"
[2025-10-08 07:27:42] ID_LIKE="rhel fedora"
[2025-10-08 07:27:42] VERSION_ID="7"
[2025-10-08 07:27:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 07:27:42] ANSI_COLOR="0;31"
[2025-10-08 07:27:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 07:27:42] HOME_URL="https://www.centos.org/"
[2025-10-08 07:27:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 07:27:42] 
[2025-10-08 07:27:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 07:27:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 07:27:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 07:27:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 07:27:42] 
[2025-10-08 07:27:42] 2025-10-08 05:26:32,539 | INFO     | ***************************************
[2025-10-08 07:27:42] 2025-10-08 05:26:33,042 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-08 07:27:42] 2025-10-08 05:26:33,220 | INFO     | sufficient remaining disk space (496324575232 B)
[2025-10-08 07:27:42] 2025-10-08 05:26:33,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 07:27:42] 2025-10-08 05:26:33,220 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 07:27:42] 2025-10-08 05:26:33,220 | INFO     | update_server=False
[2025-10-08 07:27:42] 2025-10-08 05:26:33,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 07:27:42] 2025-10-08 05:26:33,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 07:27:42] 2025-10-08 05:26:33,675 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 07:27:42] 2025-10-08 05:26:33,675 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 07:27:42] 2025-10-08 05:26:33,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 07:27:42] 2025-10-08 05:26:33,675 | INFO     | will abort loop
[2025-10-08 07:27:42] 2025-10-08 05:26:34,160 | INFO     | all data control threads have been joined
[2025-10-08 07:27:42] 2025-10-08 05:26:34,226 | INFO     | [job] retrieve thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:34,289 | INFO     | all job control threads have been joined
[2025-10-08 07:27:42] 2025-10-08 05:26:34,365 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:34,369 | INFO     | all payload control threads have been joined
[2025-10-08 07:27:42] 2025-10-08 05:26:34,440 | INFO     | [data] copytool_in thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:34,680 | INFO     | [job] job monitor thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:34,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 07:27:42] 2025-10-08 05:26:35,166 | INFO     | [data] control thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,191 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,229 | INFO     | [data] copytool_out thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,280 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,295 | INFO     | [job] control thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,374 | INFO     | [job] validate thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,375 | INFO     | [payload] control thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,476 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,530 | INFO     | [payload] failed_post thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,573 | INFO     | [payload] validate_post thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,785 | INFO     | [job] queue monitor thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:26:35,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 07:27:42] 2025-10-08 05:26:39,978 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 07:27:42] 2025-10-08 05:27:03,283 | INFO     | PID=10786 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 07:27:42] 2025-10-08 05:27:03,283 | INFO     | .. there are 9 such processes running
[2025-10-08 07:27:42] 2025-10-08 05:27:03,284 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 07:27:42] 2025-10-08 05:27:03,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 07:27:42] 2025-10-08 05:27:03,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 07:27:42] 2025-10-08 05:27:32,104 | INFO     | [monitor] cgroup control has ended
[2025-10-08 07:27:42] 2025-10-08 05:27:32,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708003534656)>', '<ExcThread(monitor, started 139707409221376)>']
[2025-10-08 07:27:42] 2025-10-08 05:27:33,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 07:27:42] 2025-10-08 05:27:33,461 | INFO     | [monitor] control thread has ended
[2025-10-08 07:27:42] 2025-10-08 05:27:37,812 | INFO     | all workflow threads have been joined
[2025-10-08 07:27:42] 2025-10-08 05:27:37,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 07:27:42] 2025-10-08 05:27:37,812 | INFO     | traces error code: 0
[2025-10-08 07:27:42] 2025-10-08 05:27:37,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 07:27:42] 2025-10-08 05:27:38,169 [wrapper] ==== pilot stdout END ====
[2025-10-08 07:27:42] 2025-10-08 05:27:38,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 07:27:42] 2025-10-08 05:27:38,249 [wrapper] pilotpid: 10786
[2025-10-08 07:27:42] 2025-10-08 05:27:38,331 [wrapper] Pilot exit status: 0
[2025-10-08 07:27:42] 2025-10-08 05:27:38,741 [wrapper] pandaids: 6834867117
[2025-10-08 07:27:42] 2025-10-08 05:27:39,596 [wrapper] cleanup supervisor_pilot  6682 10787
[2025-10-08 07:27:42] 2025-10-08 05:27:39,694 [wrapper] Test setup, not cleaning
[2025-10-08 07:27:42] 2025-10-08 05:27:39,801 [wrapper] apfmon messages muted
[2025-10-08 07:27:42] 2025-10-08 05:27:39,890 [wrapper] ==== wrapper stdout END ====
[2025-10-08 07:27:42] 2025-10-08 05:27:39,988 [wrapper] ==== wrapper stderr END ====
[2025-10-08 07:27:42]  *** Error codes and diagnostics ***
[2025-10-08 07:27:42]     "exeErrorCode": 0,
[2025-10-08 07:27:42]     "exeErrorDiag": "",
[2025-10-08 07:27:42]     "pilotErrorCode": 0,
[2025-10-08 07:27:42]     "pilotErrorDiag": "",
[2025-10-08 07:27:42]  *** Listing of results directory ***
[2025-10-08 07:27:42] total 395320
[2025-10-08 07:27:42] -rwx------. 1 boinc boinc     36292 Oct  7 15:09 runpilot2-wrapper.sh
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc      5112 Oct  7 15:09 queuedata.json
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc    552446 Oct  7 15:09 pilot3.tar.gz
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc       100 Oct  8 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 07:27:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 03:54 run_atlas
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc       105 Oct  8 03:54 job.xml
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc      6392 Oct  8 03:54 init_data.xml
[2025-10-08 07:27:42] -rw-r--r--. 2 boinc boinc 215769110 Oct  8 03:54 EVNT.46376901._004613.pool.root.1
[2025-10-08 07:27:42] -rw-r--r--. 2 boinc boinc     15120 Oct  8 03:54 start_atlas.sh
[2025-10-08 07:27:42] drwxrwx--x. 2 boinc boinc        68 Oct  8 03:54 shared
[2025-10-08 07:27:42] -rw-r--r--. 2 boinc boinc    565602 Oct  8 03:54 input.tar.gz
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc         0 Oct  8 03:54 boinc_lockfile
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc      2521 Oct  8 03:54 pandaJob.out
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc    979833 Oct  8 03:58 agis_schedconf.cvmfs.json
[2025-10-08 07:27:42] drwx------. 4 boinc boinc      4096 Oct  8 03:58 pilot3
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc 180949994 Oct  8 07:23 HITS.46376905._134946.pool.root.1
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc       531 Oct  8 07:23 boinc_task_state.xml
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc      1018 Oct  8 07:24 memory_monitor_summary.json
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc   1560401 Oct  8 07:24 agis_ddmendpoints.agis.ALL.json
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc    431002 Oct  8 07:24 log.46376905._134946.job.log.tgz.1
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc      7783 Oct  8 07:26 heartbeat.json
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc        95 Oct  8 07:27 pilot_heartbeat.json
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc        28 Oct  8 07:27 wrapper_checkpoint.txt
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc      8192 Oct  8 07:27 boinc_mmap_file
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc      5071 Oct  8 07:27 pilotlog.txt
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc   1672816 Oct  8 07:27 log.46376905._134946.job.log.1
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc       357 Oct  8 07:27 output.list
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc       620 Oct  8 07:27 runtime_log
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc   2119680 Oct  8 07:27 result.tar.gz
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc      8717 Oct  8 07:27 runtime_log.err
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc       657 Oct  8 07:27 O7hLDmhcMQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsAXNDmNh7exm.diag
[2025-10-08 07:27:42] -rw-r--r--. 1 boinc boinc     20659 Oct  8 07:27 stderr.txt
[2025-10-08 07:27:42] HITS file was successfully produced:
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc 180949994 Oct  8 07:23 shared/HITS.pool.root.1
[2025-10-08 07:27:42]  *** Contents of shared directory: ***
[2025-10-08 07:27:42] total 390072
[2025-10-08 07:27:42] -rw-r--r--. 2 boinc boinc 215769110 Oct  8 03:54 ATLAS.root_0
[2025-10-08 07:27:42] -rw-r--r--. 2 boinc boinc     15120 Oct  8 03:54 start_atlas.sh
[2025-10-08 07:27:42] -rw-r--r--. 2 boinc boinc    565602 Oct  8 03:54 input.tar.gz
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc 180949994 Oct  8 07:23 HITS.pool.root.1
[2025-10-08 07:27:42] -rw-------. 1 boinc boinc   2119680 Oct  8 07:27 result.tar.gz
07:27:43 (7003): run_atlas exited; CPU time 45346.065465
07:27:43 (7003): called boinc_finish(0)

</stderr_txt>
]]>

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