Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:25:27 (1473047): wrapper (7.7.26015): starting
14:25:27 (1473047): wrapper: running run_atlas (--nthreads 9)
[2025-10-07 14:25:27] Arguments: --nthreads 9
[2025-10-07 14:25:27] Threads: 9
[2025-10-07 14:25:27] Checking for CVMFS
[2025-10-07 14:25:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 14:25:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 14:25:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 14:25:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 14:25:29] 2.13.2.0 3269412 28884 286568 151444 0 291 20566840 40960000 25754 16776704 0 348941384 99.821 161797626 36604 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-07 14:25:29] CVMFS is ok
[2025-10-07 14:25:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 14:25:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 14:25:29] Further information can be found at the LHC@home message board.
[2025-10-07 14:25:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 14:25:29] Checking for apptainer binary...
[2025-10-07 14:25:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 14:25:29] Running /usr/bin/apptainer --version
[2025-10-07 14:25:29] apptainer version 1.4.2-1.el9
[2025-10-07 14:25:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 14:25:29] c8-16-2.aglt2.org
[2025-10-07 14:25:29] apptainer works
[2025-10-07 14:25:29] Set ATHENA_PROC_NUMBER=9
[2025-10-07 14:25:29] Set ATHENA_CORE_NUMBER=9
[2025-10-07 14:25:29] Starting ATLAS job with PandaID=6834417230
[2025-10-07 14:25:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 15:11:58]  *** The last 200 lines of the pilot log: ***
[2025-10-07 15:11:58]  protocol_id=None
[2025-10-07 15:11:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-07 15:11:58]  replicas=None
[2025-10-07 15:11:58]  scope=mc23_13p6TeV
[2025-10-07 15:11:58]  status=None
[2025-10-07 15:11:58]  status_code=0
[2025-10-07 15:11:58]  storage_token=
[2025-10-07 15:11:58]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6834417230/log.46376905._134386.job.log.tgz.1
[2025-10-07 15:11:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/56/log.46376905._134386.job.log.tgz.1
[2025-10-07 15:11:58]  workdir=None
[2025-10-07 15:11:58] ]
[2025-10-07 15:11:58] 2025-10-07 19:11:02,413 | INFO     | transferring file log.46376905._134386.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6834417230/log.46376905._134386.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-07 15:11:58] 2025-10-07 19:11:02,413 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6834417230/log.46376905._134386.job.log.tgz.1 /tmp/boinchome/slots/8/log.46376905._134386.job
[2025-10-07 15:11:58] 2025-10-07 19:11:02,427 | INFO     | adding to output.list: log.46376905._134386.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/56/log.46376905._134386.job.log.tg
[2025-10-07 15:11:58] 2025-10-07 19:11:02,428 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 15:11:58] 2025-10-07 19:11:02,428 | INFO     | summary of transferred files:
[2025-10-07 15:11:58] 2025-10-07 19:11:02,428 | INFO     |  -- lfn=log.46376905._134386.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 15:11:58] 2025-10-07 19:11:02,428 | INFO     | stage-out finished correctly
[2025-10-07 15:11:58] 2025-10-07 19:11:03,201 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 15:11:58] 2025-10-07 19:11:03,254 | INFO     | job 6834417230 has state=finished
[2025-10-07 15:11:58] 2025-10-07 19:11:03,255 | INFO     | preparing for final server update for job 6834417230 in state='finished'
[2025-10-07 15:11:58] 2025-10-07 19:11:03,255 | INFO     | this job has now completed (state=finished)
[2025-10-07 15:11:58] 2025-10-07 19:11:03,255 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 15:11:58] 2025-10-07 19:11:03,255 | INFO     | log transfer has been attempted: DONE
[2025-10-07 15:11:58] 2025-10-07 19:11:03,255 | INFO     | job 6834417230 has finished - writing final server update
[2025-10-07 15:11:58] 2025-10-07 19:11:03,255 | INFO     | total number of processed events: 400 (read)
[2025-10-07 15:11:58] 2025-10-07 19:11:03,256 | INFO     | executing command: lscpu
[2025-10-07 15:11:58] 2025-10-07 19:11:03,306 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 15:11:58] 2025-10-07 19:11:03,952 | INFO     | monitor loop #196: job 0:6834417230 is in state 'finished'
[2025-10-07 15:11:58] 2025-10-07 19:11:03,953 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 15:11:58] 2025-10-07 19:11:04,387 | INFO     | time since job start (2696s) is within the limit (172800.0s)
[2025-10-07 15:11:58] 2025-10-07 19:11:04,805 [wrapper] supervise_pilot (15 min periods counter: 4)
[2025-10-07 15:11:58] 2025-10-07 19:11:06,392 | INFO     | time since job start (2698s) is within the limit (172800.0s)
[2025-10-07 15:11:58] 2025-10-07 19:11:06,454 | INFO     | monitor loop #197: job 0:6834417230 is in state 'finished'
[2025-10-07 15:11:58] 2025-10-07 19:11:06,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 15:11:58] 2025-10-07 19:11:06,746 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 15:11:58] 2025-10-07 19:11:06,749 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3559.363617187504
[2025-10-07 15:11:58] 2025-10-07 19:11:06,758 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6834417230/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 15:11:58] 2025-10-07 19:11:06,759 | INFO     | extracted standard info from prmon json
[2025-10-07 15:11:58] 2025-10-07 19:11:06,759 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 15:11:58] 2025-10-07 19:11:06,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 15:11:58] 2025-10-07 19:11:06,760 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 15:11:58] 2025-10-07 19:11:06,760 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | fitting pss+swap vs Time
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | sum of square deviations: 14456085.0
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | sum of deviations: -45510483.499999985
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | mean x: 1759863037.5
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | mean y: 2251324.8055555555
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | -- intersect: 5542632259.920671
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | intersect: 5542632259.920671
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | chi2: 0.012565675342054114
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | -- intersect: 5542632259.920671
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | current memory leak: -3.15 B/s (using 36 data points, chi2=0.01)
[2025-10-07 15:11:58] 2025-10-07 19:11:06,761 | INFO     | could have reported an average CPU frequency of 3751 MHz (5 samples)
[2025-10-07 15:11:58] 2025-10-07 19:11:06,762 | INFO     | ..............................
[2025-10-07 15:11:58] 2025-10-07 19:11:06,762 | INFO     | . Timing measurements:
[2025-10-07 15:11:58] 2025-10-07 19:11:06,762 | INFO     | . get job = 0 s
[2025-10-07 15:11:58] 2025-10-07 19:11:06,762 | INFO     | . initial setup = 3 s
[2025-10-07 15:11:58] 2025-10-07 19:11:06,762 | INFO     | . payload setup = 28 s
[2025-10-07 15:11:58] 2025-10-07 19:11:06,762 | INFO     | . stage-in = 0 s
[2025-10-07 15:11:58] 2025-10-07 19:11:06,762 | INFO     | . payload execution = 2616 s
[2025-10-07 15:11:58] 2025-10-07 19:11:06,762 | INFO     | . stage-out = 0 s
[2025-10-07 15:11:58] 2025-10-07 19:11:06,762 | INFO     | . log creation = 0 s
[2025-10-07 15:11:58] 2025-10-07 19:11:06,762 | INFO     | ..............................
[2025-10-07 15:11:58] 2025-10-07 19:11:06,819 | INFO     | 
[2025-10-07 15:11:58] 2025-10-07 19:11:06,819 | INFO     | job summary report
[2025-10-07 15:11:58] 2025-10-07 19:11:06,819 | INFO     | --------------------------------------------------
[2025-10-07 15:11:58] 2025-10-07 19:11:06,819 | INFO     | PanDA job id: 6834417230
[2025-10-07 15:11:58] 2025-10-07 19:11:06,819 | INFO     | task id: 46376905
[2025-10-07 15:11:58] 2025-10-07 19:11:06,819 | INFO     | errors: (none)
[2025-10-07 15:11:58] 2025-10-07 19:11:06,819 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | pilot state: finished 
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | transexitcode: 0
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | exeerrorcode: 0
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | exeerrordiag: 
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | exitcode: 0
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | exitmsg: OK
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | cpuconsumptiontime: 19054 s
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | nevents: 400
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | neventsw: 0
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | pid: 1498825
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | pgrp: 1498825
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | corecount: 9
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | event service: False
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | sizes: {0: 2348770, 11: 2348770, 18: 2349060, 22: 2349088, 2648: 2374351, 2650: 2383533, 2654: 2383703}
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | --------------------------------------------------
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | 
[2025-10-07 15:11:58] 2025-10-07 19:11:06,820 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-07 15:11:58] 2025-10-07 19:11:06,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | job 6834417230 has completed (purged errors)
[2025-10-07 15:11:58] 2025-10-07 19:11:06,834 | INFO     | overall cleanup function is called
[2025-10-07 15:11:58] 2025-10-07 19:11:07,842 | INFO     | --- collectZombieJob: --- 10, [1498825]
[2025-10-07 15:11:58] 2025-10-07 19:11:07,842 | INFO     | zombie collector waiting for pid 1498825
[2025-10-07 15:11:58] 2025-10-07 19:11:07,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 15:11:58] 2025-10-07 19:11:07,842 | INFO     | collected zombie processes
[2025-10-07 15:11:58] 2025-10-07 19:11:07,842 | INFO     | will attempt to kill all subprocesses of pid=1498825
[2025-10-07 15:11:58] 2025-10-07 19:11:08,231 | INFO     | process IDs to be killed: [1498825] (in reverse order)
[2025-10-07 15:11:58] 2025-10-07 19:11:08,462 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 15:11:58] 2025-10-07 19:11:08,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 15:11:58] 2025-10-07 19:11:08,495 | INFO     | did not find any defunct processes belonging to 1498825
[2025-10-07 15:11:58] 2025-10-07 19:11:08,528 | INFO     | did not find any defunct processes belonging to 1498825
[2025-10-07 15:11:58] 2025-10-07 19:11:08,528 | INFO     | ready for new job
[2025-10-07 15:11:58] 2025-10-07 19:11:08,528 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 15:11:58] 2025-10-07 19:11:08,530 | INFO     | ***************************************
[2025-10-07 15:11:58] 2025-10-07 19:11:08,530 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 15:11:58] 2025-10-07 19:11:08,530 | INFO     | ***************************************
[2025-10-07 15:11:58] 2025-10-07 19:11:08,530 | INFO     | 
[2025-10-07 15:11:58] 2025-10-07 19:11:08,546 | INFO     | architecture information:
[2025-10-07 15:11:58] 2025-10-07 19:11:08,546 | INFO     | executing command: cat /etc/os-release
[2025-10-07 15:11:58] 2025-10-07 19:11:08,556 | INFO     | cat /etc/os-release:
[2025-10-07 15:11:58] NAME="CentOS Linux"
[2025-10-07 15:11:58] VERSION="7 (Core)"
[2025-10-07 15:11:58] ID="centos"
[2025-10-07 15:11:58] ID_LIKE="rhel fedora"
[2025-10-07 15:11:58] VERSION_ID="7"
[2025-10-07 15:11:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 15:11:58] ANSI_COLOR="0;31"
[2025-10-07 15:11:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 15:11:58] HOME_URL="https://www.centos.org/"
[2025-10-07 15:11:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 15:11:58] 
[2025-10-07 15:11:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 15:11:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 15:11:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 15:11:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 15:11:58] 
[2025-10-07 15:11:58] 2025-10-07 19:11:08,556 | INFO     | ***************************************
[2025-10-07 15:11:58] 2025-10-07 19:11:09,059 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-07 15:11:58] 2025-10-07 19:11:09,070 | INFO     | sufficient remaining disk space (169757114368 B)
[2025-10-07 15:11:58] 2025-10-07 19:11:09,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 15:11:58] 2025-10-07 19:11:09,071 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 15:11:58] 2025-10-07 19:11:09,071 | INFO     | update_server=False
[2025-10-07 15:11:58] 2025-10-07 19:11:09,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 15:11:58] 2025-10-07 19:11:09,104 | INFO     | all data control threads have been joined
[2025-10-07 15:11:58] 2025-10-07 19:11:09,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 15:11:58] 2025-10-07 19:11:09,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:11:58] 2025-10-07 19:11:09,960 | INFO     | aborting loop
[2025-10-07 15:11:58] 2025-10-07 19:11:10,076 | INFO     | [job] retrieve thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:10,109 | INFO     | [data] control thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:10,184 | INFO     | all job control threads have been joined
[2025-10-07 15:11:58] 2025-10-07 19:11:10,366 | INFO     | [job] validate thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:10,404 | INFO     | all payload control threads have been joined
[2025-10-07 15:11:58] 2025-10-07 19:11:10,415 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:10,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 15:11:58] 2025-10-07 19:11:10,659 | INFO     | [data] copytool_in thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:10,691 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:10,726 | INFO     | [payload] failed_post thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:10,799 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:10,966 | INFO     | [job] job monitor thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:11,188 | INFO     | [job] control thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:11,410 | INFO     | [payload] control thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:11,467 | INFO     | [payload] validate_post thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:11,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:11:58] 2025-10-07 19:11:12,498 | INFO     | [data] copytool_out thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:12,516 | INFO     | [monitor] cgroup control has ended
[2025-10-07 15:11:58] 2025-10-07 19:11:12,835 | INFO     | [job] queue monitor thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:13,266 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:19,870 | INFO     | job.realtimelogging is not enabled
[2025-10-07 15:11:58] 2025-10-07 19:11:20,875 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 15:11:58] 2025-10-07 19:11:22,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200371320640)>', '<ExcThread(monitor, started 140199585629952)>']
[2025-10-07 15:11:58] 2025-10-07 19:11:27,688 | INFO     | all workflow threads have been joined
[2025-10-07 15:11:58] 2025-10-07 19:11:27,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 15:11:58] 2025-10-07 19:11:27,688 | INFO     | traces error code: 0
[2025-10-07 15:11:58] 2025-10-07 19:11:27,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 15:11:58] 2025-10-07 19:11:40,145 | INFO     | PID=1481080 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 15:11:58] 2025-10-07 19:11:40,146 | INFO     | .. there are 30 such processes running
[2025-10-07 15:11:58] 2025-10-07 19:11:40,146 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 15:11:58] 2025-10-07 19:11:40,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 15:11:58] 2025-10-07 19:11:40,146 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 15:11:58] 2025-10-07 19:11:40,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 15:11:58] 2025-10-07 19:11:40,146 | INFO     | [monitor] control thread has ended
[2025-10-07 15:11:58] 2025-10-07 19:11:40,241 [wrapper] ==== pilot stdout END ====
[2025-10-07 15:11:58] 2025-10-07 19:11:40,243 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 15:11:58] 2025-10-07 19:11:40,245 [wrapper] pilotpid: 1481080
[2025-10-07 15:11:58] 2025-10-07 19:11:40,246 [wrapper] Pilot exit status: 0
[2025-10-07 15:11:58] 2025-10-07 19:11:40,252 [wrapper] pandaids: 6834417230
[2025-10-07 15:11:58] 2025-10-07 19:11:40,364 [wrapper] cleanup supervisor_pilot 1837891 1481081
[2025-10-07 15:11:58] 2025-10-07 19:11:40,366 [wrapper] Test setup, not cleaning
[2025-10-07 15:11:58] 2025-10-07 19:11:40,368 [wrapper] apfmon messages muted
[2025-10-07 15:11:58] 2025-10-07 19:11:40,370 [wrapper] ==== wrapper stdout END ====
[2025-10-07 15:11:58] 2025-10-07 19:11:40,372 [wrapper] ==== wrapper stderr END ====
[2025-10-07 15:11:58]  *** Error codes and diagnostics ***
[2025-10-07 15:11:58]     "exeErrorCode": 0,
[2025-10-07 15:11:58]     "exeErrorDiag": "",
[2025-10-07 15:11:58]     "pilotErrorCode": 0,
[2025-10-07 15:11:58]     "pilotErrorDiag": "",
[2025-10-07 15:11:58]  *** Listing of results directory ***
[2025-10-07 15:11:58] total 389324
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas    552446 Oct  7 07:55 pilot3.tar.gz
[2025-10-07 15:11:58] -rwx------. 1 boincer umatlas     36292 Oct  7 08:30 runpilot2-wrapper.sh
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas      5112 Oct  7 08:30 queuedata.json
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas       100 Oct  7 14:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 15:11:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  7 14:25 run_atlas
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas       105 Oct  7 14:25 job.xml
[2025-10-07 15:11:58] -rw-r--r--. 2 boincer umatlas 217279245 Oct  7 14:25 EVNT.46376901._004259.pool.root.1
[2025-10-07 15:11:58] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 14:25 start_atlas.sh
[2025-10-07 15:11:58] drwxrwx--x. 2 boincer umatlas      4096 Oct  7 14:25 shared
[2025-10-07 15:11:58] -rw-r--r--. 2 boincer umatlas    565605 Oct  7 14:25 input.tar.gz
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas         0 Oct  7 14:25 boinc_lockfile
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas      2521 Oct  7 14:25 pandaJob.out
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas    977512 Oct  7 14:26 agis_schedconf.cvmfs.json
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas   1560401 Oct  7 14:26 agis_ddmendpoints.agis.ALL.json
[2025-10-07 15:11:58] drwx------. 4 boincer umatlas      4096 Oct  7 14:26 pilot3
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas      7163 Oct  7 15:09 init_data.xml
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas 176044582 Oct  7 15:10 HITS.46376905._134386.pool.root.1
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas       529 Oct  7 15:10 boinc_task_state.xml
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas        95 Oct  7 15:10 pilot_heartbeat.json
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas      1029 Oct  7 15:10 memory_monitor_summary.json
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas    324761 Oct  7 15:11 log.46376905._134386.job.log.tgz.1
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas      7772 Oct  7 15:11 heartbeat.json
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas       823 Oct  7 15:11 pilotlog.txt
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas    403021 Oct  7 15:11 log.46376905._134386.job.log.1
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas       357 Oct  7 15:11 output.list
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas       620 Oct  7 15:11 runtime_log
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas    747520 Oct  7 15:11 result.tar.gz
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas      8698 Oct  7 15:11 runtime_log.err
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas       649 Oct  7 15:11 1kNKDmk0LQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr3WNDmvaJSGo.diag
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas        27 Oct  7 15:11 wrapper_checkpoint.txt
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas      8192 Oct  7 15:11 boinc_mmap_file
[2025-10-07 15:11:58] -rw-r--r--. 1 boincer umatlas     21745 Oct  7 15:11 stderr.txt
[2025-10-07 15:11:58] HITS file was successfully produced:
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas 176044582 Oct  7 15:10 shared/HITS.pool.root.1
[2025-10-07 15:11:58]  *** Contents of shared directory: ***
[2025-10-07 15:11:58] total 385420
[2025-10-07 15:11:58] -rw-r--r--. 2 boincer umatlas 217279245 Oct  7 14:25 ATLAS.root_0
[2025-10-07 15:11:58] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 14:25 start_atlas.sh
[2025-10-07 15:11:58] -rw-r--r--. 2 boincer umatlas    565605 Oct  7 14:25 input.tar.gz
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas 176044582 Oct  7 15:10 HITS.pool.root.1
[2025-10-07 15:11:58] -rw-------. 1 boincer umatlas    747520 Oct  7 15:11 result.tar.gz
15:11:59 (1473047): run_atlas exited; CPU time 19154.391020
15:11:59 (1473047): called boinc_finish(0)

</stderr_txt>
]]>

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