Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-08 03:04:08 (6834): vboxwrapper version 26210
2025-10-08 03:04:08 (6834): BOINC client version: 7.9.3
2025-10-08 03:04:10 (6834): Detected: VirtualBox VboxManage Interface (Version: 5.2.42)
2025-10-08 03:04:10 (6834): Successfully copied 'init_data.xml' to the shared directory.
2025-10-08 03:04:10 (6834): Create VM. (boinc_3674b7cf0b04699b, slot#0)
2025-10-08 03:04:10 (6834): Setting Memory Size for VM. (4300MB)
2025-10-08 03:04:10 (6834): Setting CPU Count for VM. (3)
2025-10-08 03:04:10 (6834): Setting Chipset Options for VM.
2025-10-08 03:04:10 (6834): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-08 03:04:11 (6834): Setting Boot Options for VM.
2025-10-08 03:04:11 (6834): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-08 03:04:11 (6834): Enabling VM Network Access.
2025-10-08 03:04:11 (6834): Disabling USB Support for VM.
2025-10-08 03:04:11 (6834): Disabling COM Port Support for VM.
2025-10-08 03:04:11 (6834): Disabling LPT Port Support for VM.
2025-10-08 03:04:11 (6834): Disabling Audio Support for VM.
2025-10-08 03:04:11 (6834): Disabling Clipboard Support for VM.
2025-10-08 03:04:12 (6834): Disabling Drag and Drop Support for VM.
2025-10-08 03:04:12 (6834): Adding storage controller(s) to VM.
2025-10-08 03:04:12 (6834): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-08 03:04:12 (6834): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-08 03:04:12 (6834): forwarding host port 42659 to guest port 80
2025-10-08 03:04:12 (6834): Enabling remote desktop for VM.
2025-10-08 03:04:12 (6834): Required extension pack not installed, remote desktop not enabled.
2025-10-08 03:04:12 (6834): Enabling shared directory for VM.
2025-10-08 03:04:13 (6834): Starting VM using VBoxManage interface. (boinc_3674b7cf0b04699b, slot#0)
2025-10-08 03:04:14 (6834): Successfully started VM. (PID = '7219')
2025-10-08 03:04:14 (6834): Reporting VM Process ID to BOINC.
2025-10-08 03:04:14 (6834): Guest Log: BIOS: VirtualBox 5.2.41
2025-10-08 03:04:14 (6834): Guest Log: CPUID EDX: 0x178bfbff
2025-10-08 03:04:14 (6834): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-08 03:04:14 (6834): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-08 03:04:14 (6834): Detected: Web Application Enabled (http://localhost:42659)
2025-10-08 03:04:14 (6834): Preference change detected
2025-10-08 03:04:14 (6834): Setting CPU throttle for VM. (75%)
2025-10-08 03:04:14 (6834): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-08 03:04:16 (6834): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-08 03:04:16 (6834): Guest Log: BIOS: Booting from Hard Disk...
2025-10-08 03:04:20 (6834): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-08 03:04:20 (6834): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-08 03:04:20 (6834): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-08 03:04:28 (6834): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-08 03:04:28 (6834): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-08 03:04:42 (6834): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-08 03:04:42 (6834): Guest Log: 00:00:00.000301 main     Log opened 2025-10-08T01:04:39.860030000Z
2025-10-08 03:04:42 (6834): Guest Log: 00:00:00.000474 main     OS Product: Linux
2025-10-08 03:04:42 (6834): Guest Log: 00:00:00.000535 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-08 03:04:42 (6834): Guest Log: 00:00:00.000585 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-08 03:04:42 (6834): Guest Log: 00:00:00.000653 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-08 03:04:42 (6834): Guest Log: 00:00:00.000654 main     Process ID: 1257
2025-10-08 03:04:42 (6834): Guest Log: 00:00:00.000655 main     Package type: LINUX_64BITS_GENERIC
2025-10-08 03:04:42 (6834): Guest Log: 00:00:00.003499 main     5.2.32 r132073 started. Verbose level = 0
2025-10-08 03:04:42 (6834): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-08 03:04:42 (6834): Guest Log: [INFO] Mounting shared directory
2025-10-08 03:04:42 (6834): Guest Log: [INFO] Checking for init_data.xml
2025-10-08 03:04:49 (6834): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-08 03:04:49 (6834): Guest Log: [INFO] Detected branch: prod
2025-10-08 03:04:49 (6834): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-08 03:04:49 (6834): Guest Log: Copying input files
2025-10-08 03:04:51 (6834): Guest Log: Copied input files into RunAtlas.
2025-10-08 03:04:51 (6834): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-08 03:04:51 (6834): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-08 03:04:51 (6834): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-08 03:04:51 (6834): Guest Log: Further information can be found at the LHC@home message board.
2025-10-08 03:05:01 (6834): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-08 03:05:01 (6834): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-08 03:05:01 (6834): Guest Log: 2.6.3.0 1532 0 32200 151452 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-08 03:05:04 (6834): Guest Log: copied the webapp to /var/www
2025-10-08 03:05:06 (6834): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-08 03:05:06 (6834): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-08 03:05:06 (6834): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-08 03:05:06 (6834): Guest Log:  *** Starting ATLAS job. (PandaID=6834899585 taskID=46376905) ***
2025-10-08 04:43:14 (6834): Status Report: Elapsed Time: '6000.000000'
2025-10-08 04:43:14 (6834): Status Report: CPU Time: '12689.440000'
2025-10-08 06:22:15 (6834): Status Report: Elapsed Time: '12000.000000'
2025-10-08 06:22:15 (6834): Status Report: CPU Time: '26071.570000'
2025-10-08 08:01:15 (6834): Status Report: Elapsed Time: '18000.000000'
2025-10-08 08:01:15 (6834): Status Report: CPU Time: '39468.700000'
2025-10-08 09:40:16 (6834): Status Report: Elapsed Time: '24000.000000'
2025-10-08 09:40:16 (6834): Status Report: CPU Time: '52858.130000'
2025-10-08 09:51:43 (6834): Guest Log:  *** Job finished ***
2025-10-08 09:51:43 (6834): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:15,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:15,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:37,073 | INFO     | [monitor] cgroup control has ended
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:37,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871274014528)>', '<ExcThread(monitor, started 139870534084352)>']
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:37,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:37,420 | INFO     | [monitor] control thread has ended
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,127 | INFO     | all workflow threads have been joined
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,127 | INFO     | end of generic workflow (traces error code: 0)
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,128 | INFO     | traces error code: 0
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,282 [wrapper] ==== pilot stdout END ====
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,293 [wrapper] ==== wrapper stdout RESUME ====
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,308 [wrapper] pilotpid: 5917
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,318 [wrapper] Pilot exit status: 0
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,544 [wrapper] pandaids: 6834899585
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,595 [wrapper] cleanup supervisor_pilot 28696 5918
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,605 [wrapper] Test setup, not cleaning
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,615 [wrapper] apfmon messages muted
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,623 [wrapper] ==== wrapper stdout END ====
2025-10-08 09:51:43 (6834): Guest Log: 2025-10-08 07:51:42,633 [wrapper] ==== wrapper stderr END ====
2025-10-08 09:51:43 (6834): Guest Log:  *** Error codes and diagnostics ***
2025-10-08 09:51:43 (6834): Guest Log:     "exeErrorCode": 0,
2025-10-08 09:51:43 (6834): Guest Log:     "exeErrorDiag": "",
2025-10-08 09:51:43 (6834): Guest Log:     "pilotErrorCode": 0,
2025-10-08 09:51:43 (6834): Guest Log:     "pilotErrorDiag": "",
2025-10-08 09:51:43 (6834): Guest Log:  *** Listing of results directory ***
2025-10-08 09:51:43 (6834): Guest Log: total 187780
2025-10-08 09:51:43 (6834): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  7 13:09 queuedata.json
2025-10-08 09:51:43 (6834): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  7 13:09 pilot3.tar.gz
2025-10-08 09:51:43 (6834): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  7 13:10 runpilot2-wrapper.sh
2025-10-08 09:51:43 (6834): Guest Log: -rw-r--r--. 1 atlas atlas    565613 Oct  8 01:04 input.tar.gz
2025-10-08 09:51:43 (6834): Guest Log: -rw-r--r--. 1 atlas atlas      6150 Oct  8 01:04 init_data.xml
2025-10-08 09:51:43 (6834): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct  8 01:04 start_atlas.sh
2025-10-08 09:51:43 (6834): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  8 01:04 EVNT.46376901._004389.pool.root.1 -> /data/./ATLAS.root_0
2025-10-08 09:51:43 (6834): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Oct  8 01:05 pandaJob.out
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas    979833 Oct  8 01:06 agis_schedconf.cvmfs.json
2025-10-08 09:51:43 (6834): Guest Log: drwx------. 4 atlas atlas      4096 Oct  8 01:06 pilot3
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas 181335384 Oct  8 07:49 HITS.46376905._134978.pool.root.1
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas      1028 Oct  8 07:50 memory_monitor_summary.json
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  8 07:50 agis_ddmendpoints.agis.ALL.json
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas    512411 Oct  8 07:50 log.46376905._134978.job.log.tgz.1
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas        95 Oct  8 07:50 pilot_heartbeat.json
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas      7818 Oct  8 07:50 heartbeat.json
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas      4877 Oct  8 07:51 pilotlog.txt
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas   3053904 Oct  8 07:51 log.46376905._134978.job.log.1
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas       357 Oct  8 07:51 output.list
2025-10-08 09:51:43 (6834): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  8 07:51 runtime_log
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas   3584000 Oct  8 07:51 result.tar.gz
2025-10-08 09:51:43 (6834): Guest Log: -rw-r--r--. 1 atlas atlas      8649 Oct  8 07:51 runtime_log.err
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas       662 Oct  8 07:51 ORGKDmhdMQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIjLMDmr9tzon.diag
2025-10-08 09:51:43 (6834): Guest Log: Looking for outputfile HITS.46376905._134978.pool.root.1
2025-10-08 09:51:43 (6834): Guest Log: HITS file was successfully produced
2025-10-08 09:51:43 (6834): Guest Log: -rw-------. 1 atlas atlas 181335384 Oct  8 07:49 /home/atlas/RunAtlas/HITS.46376905._134978.pool.root.1
2025-10-08 09:51:44 (6834): Guest Log: Successfully finished the ATLAS job!
2025-10-08 09:51:44 (6834): Guest Log: Copying the results back to the shared directory!
2025-10-08 09:51:44 (6834): Guest Log:  *** Contents of shared directory: ***
2025-10-08 09:51:44 (6834): Guest Log: total 210400
2025-10-08 09:51:44 (6834): Guest Log: -rw-r--r--. 1 root root 211264922 Oct  8 01:04 ATLAS.root_0
2025-10-08 09:51:44 (6834): Guest Log: -rw-r--r--. 1 root root      6150 Oct  8 01:04 init_data.xml
2025-10-08 09:51:44 (6834): Guest Log: -rw-r--r--. 1 root root    565613 Oct  8 01:04 input.tar.gz
2025-10-08 09:51:44 (6834): Guest Log: -rw-r--r--. 1 root root   3584000 Oct  8 07:51 result.tar.gz
2025-10-08 09:51:44 (6834): Guest Log: -rw-r--r--. 1 root root     15120 Oct  8 01:04 start_atlas.sh
2025-10-08 09:51:44 (6834): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-08 09:51:44 (6834): VM Completion File Detected.
2025-10-08 09:51:44 (6834): Powering off VM.
2025-10-08 09:51:45 (6834): Successfully stopped VM.
2025-10-08 09:51:45 (6834): Deregistering VM. (boinc_3674b7cf0b04699b, slot#0)
2025-10-08 09:51:45 (6834): Removing network bandwidth throttle group from VM.
2025-10-08 09:51:45 (6834): Removing VM from VirtualBox.
2025-10-08 09:51:50 (6834): called boinc_finish(0)

</stderr_txt>
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