Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
18:38:49 (1110338): wrapper (7.7.26015): starting
18:38:49 (1110338): wrapper: running run_atlas (--nthreads 4)
[2025-10-07 18:38:49] Arguments: --nthreads 4
[2025-10-07 18:38:49] Threads: 4
[2025-10-07 18:38:49] Checking for CVMFS
[2025-10-07 18:38:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 18:38:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 18:38:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 18:38:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 18:38:49] 2.11.0.0 223286 9336 108752 151445 0 188 3484380 4096001 6454 130560 0 55682562 99.998 322991 2009 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 18:38:49] CVMFS is ok
[2025-10-07 18:38:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 18:38:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 18:38:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 18:38:49] Further information can be found at the LHC@home message board.
[2025-10-07 18:38:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 18:38:49] Checking for apptainer binary...
[2025-10-07 18:38:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 18:38:49] Running /usr/bin/apptainer --version
[2025-10-07 18:38:49] apptainer version 1.4.2
[2025-10-07 18:38:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 18:38:50] x32-linux2
[2025-10-07 18:38:50] apptainer works
[2025-10-07 18:38:50] Set ATHENA_PROC_NUMBER=4
[2025-10-07 18:38:50] Set ATHENA_CORE_NUMBER=4
[2025-10-07 18:38:50] Starting ATLAS job with PandaID=6834899595
[2025-10-07 18:38:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 20:17:14]  *** The last 200 lines of the pilot log: ***
[2025-10-07 20:17:14]  mtime=0
[2025-10-07 20:17:14]  protocol_id=None
[2025-10-07 20:17:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-07 20:17:14]  replicas=None
[2025-10-07 20:17:14]  scope=mc23_13p6TeV
[2025-10-07 20:17:14]  status=None
[2025-10-07 20:17:14]  status_code=0
[2025-10-07 20:17:14]  storage_token=
[2025-10-07 20:17:14]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-6834899595/log.46376905._134988.job.log.tgz.1
[2025-10-07 20:17:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/35/log.46376905._134988.job.log.tgz.1
[2025-10-07 20:17:14]  workdir=None
[2025-10-07 20:17:14] ]
[2025-10-07 20:17:14] 2025-10-08 00:16:12,029 | INFO     | transferring file log.46376905._134988.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6834899595/log.46376905._134988.job.log.tgz.1 to /var/lib/boinc
[2025-10-07 20:17:14] 2025-10-08 00:16:12,029 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6834899595/log.46376905._134988.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.463769
[2025-10-07 20:17:14] 2025-10-08 00:16:12,040 | INFO     | adding to output.list: log.46376905._134988.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/35/log.46376905._134988.job.log.tg
[2025-10-07 20:17:14] 2025-10-08 00:16:12,040 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 20:17:14] 2025-10-08 00:16:12,040 | INFO     | summary of transferred files:
[2025-10-07 20:17:14] 2025-10-08 00:16:12,040 | INFO     |  -- lfn=log.46376905._134988.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 20:17:14] 2025-10-08 00:16:12,040 | INFO     | stage-out finished correctly
[2025-10-07 20:17:14] 2025-10-08 00:16:12,250 | INFO     | time since job start (5834s) is within the limit (172800.0s)
[2025-10-07 20:17:14] 2025-10-08 00:16:12,436 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 20:17:14] 2025-10-08 00:16:12,493 | INFO     | job 6834899595 has state=finished
[2025-10-07 20:17:14] 2025-10-08 00:16:12,493 | INFO     | preparing for final server update for job 6834899595 in state='finished'
[2025-10-07 20:17:14] 2025-10-08 00:16:12,494 | INFO     | this job has now completed (state=finished)
[2025-10-07 20:17:14] 2025-10-08 00:16:12,494 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 20:17:14] 2025-10-08 00:16:12,494 | INFO     | log transfer has been attempted: DONE
[2025-10-07 20:17:14] 2025-10-08 00:16:12,494 | INFO     | job 6834899595 has finished - writing final server update
[2025-10-07 20:17:14] 2025-10-08 00:16:12,494 | INFO     | total number of processed events: 400 (read)
[2025-10-07 20:17:14] 2025-10-08 00:16:12,494 | INFO     | executing command: lscpu
[2025-10-07 20:17:14] 2025-10-08 00:16:12,515 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 20:17:14] 2025-10-08 00:16:12,996 | WARNING  | process 1120967 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 20:17:14] 2025-10-08 00:16:12,996 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6834899595/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 20:17:14] 2025-10-08 00:16:13,066 | INFO     | number of running child processes to parent process 1120967: 1
[2025-10-07 20:17:14] 2025-10-08 00:16:13,066 | INFO     | maximum number of monitored processes: 6
[2025-10-07 20:17:14] 2025-10-08 00:16:14,254 | INFO     | time since job start (5836s) is within the limit (172800.0s)
[2025-10-07 20:17:14] 2025-10-08 00:16:14,802 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 20:17:14] 2025-10-08 00:16:14,804 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3937.4706250000004
[2025-10-07 20:17:14] 2025-10-08 00:16:14,806 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6834899595/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 20:17:14] 2025-10-08 00:16:14,807 | INFO     | extracted standard info from prmon json
[2025-10-07 20:17:14] 2025-10-08 00:16:14,807 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 20:17:14] 2025-10-08 00:16:14,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 20:17:14] 2025-10-08 00:16:14,807 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 20:17:14] 2025-10-08 00:16:14,807 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 20:17:14] 2025-10-08 00:16:14,807 | INFO     | fitting pss+swap vs Time
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | sum of square deviations: 218571540.0
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | sum of deviations: -7088734787.000007
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | mean x: 1759879751.0
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | mean y: 2360492.786516854
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | -- intersect: 57078962560.24054
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | intersect: 57078962560.24054
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | chi2: 0.014544579341033016
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | -- intersect: 57078962560.24054
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | current memory leak: -32.43 B/s (using 89 data points, chi2=0.01)
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | could have reported an average CPU frequency of 3838 MHz (7 samples)
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | ..............................
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | . Timing measurements:
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | . get job = 0 s
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | . initial setup = 2 s
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | . payload setup = 4 s
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | . stage-in = 0 s
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | . payload execution = 5811 s
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | . stage-out = 0 s
[2025-10-07 20:17:14] 2025-10-08 00:16:14,808 | INFO     | . log creation = 0 s
[2025-10-07 20:17:14] 2025-10-08 00:16:14,809 | INFO     | ..............................
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | 
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | job summary report
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | --------------------------------------------------
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | PanDA job id: 6834899595
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | task id: 46376905
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | errors: (none)
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | pilot state: finished 
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | transexitcode: 0
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | exeerrorcode: 0
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | exeerrordiag: 
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | exitcode: 0
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | exitmsg: OK
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | cpuconsumptiontime: 22564 s
[2025-10-07 20:17:14] 2025-10-08 00:16:14,840 | INFO     | nevents: 400
[2025-10-07 20:17:14] 2025-10-08 00:16:14,841 | INFO     | neventsw: 0
[2025-10-07 20:17:14] 2025-10-08 00:16:14,841 | INFO     | pid: 1120967
[2025-10-07 20:17:14] 2025-10-08 00:16:14,841 | INFO     | pgrp: 1120967
[2025-10-07 20:17:14] 2025-10-08 00:16:14,841 | INFO     | corecount: 4
[2025-10-07 20:17:14] 2025-10-08 00:16:14,841 | INFO     | event service: False
[2025-10-07 20:17:14] 2025-10-08 00:16:14,841 | INFO     | sizes: {0: 2348777, 4: 2349039, 11: 2349067, 5818: 2375874, 5819: 2384942, 5821: 2385080}
[2025-10-07 20:17:14] 2025-10-08 00:16:14,841 | INFO     | --------------------------------------------------
[2025-10-07 20:17:14] 2025-10-08 00:16:14,841 | INFO     | 
[2025-10-07 20:17:14] 2025-10-08 00:16:14,841 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | job 6834899595 has completed (purged errors)
[2025-10-07 20:17:14] 2025-10-08 00:16:14,854 | INFO     | overall cleanup function is called
[2025-10-07 20:17:14] 2025-10-08 00:16:15,860 | INFO     | --- collectZombieJob: --- 10, [1120967]
[2025-10-07 20:17:14] 2025-10-08 00:16:15,861 | INFO     | zombie collector waiting for pid 1120967
[2025-10-07 20:17:14] 2025-10-08 00:16:15,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 20:17:14] 2025-10-08 00:16:15,861 | INFO     | collected zombie processes
[2025-10-07 20:17:14] 2025-10-08 00:16:15,861 | INFO     | will attempt to kill all subprocesses of pid=1120967
[2025-10-07 20:17:14] 2025-10-08 00:16:15,938 | INFO     | process IDs to be killed: [1120967] (in reverse order)
[2025-10-07 20:17:14] 2025-10-08 00:16:15,968 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 20:17:14] 2025-10-08 00:16:15,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 20:17:14] 2025-10-08 00:16:15,970 | INFO     | did not find any defunct processes belonging to 1120967
[2025-10-07 20:17:14] 2025-10-08 00:16:15,971 | INFO     | did not find any defunct processes belonging to 1120967
[2025-10-07 20:17:14] 2025-10-08 00:16:15,971 | INFO     | ready for new job
[2025-10-07 20:17:14] 2025-10-08 00:16:15,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 20:17:14] 2025-10-08 00:16:15,972 | INFO     | ***************************************
[2025-10-07 20:17:14] 2025-10-08 00:16:15,972 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 20:17:14] 2025-10-08 00:16:15,972 | INFO     | ***************************************
[2025-10-07 20:17:14] 2025-10-08 00:16:15,972 | INFO     | 
[2025-10-07 20:17:14] 2025-10-08 00:16:15,973 | INFO     | architecture information:
[2025-10-07 20:17:14] 2025-10-08 00:16:15,973 | INFO     | executing command: cat /etc/os-release
[2025-10-07 20:17:14] 2025-10-08 00:16:15,980 | INFO     | cat /etc/os-release:
[2025-10-07 20:17:14] NAME="CentOS Linux"
[2025-10-07 20:17:14] VERSION="7 (Core)"
[2025-10-07 20:17:14] ID="centos"
[2025-10-07 20:17:14] ID_LIKE="rhel fedora"
[2025-10-07 20:17:14] VERSION_ID="7"
[2025-10-07 20:17:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 20:17:14] ANSI_COLOR="0;31"
[2025-10-07 20:17:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 20:17:14] HOME_URL="https://www.centos.org/"
[2025-10-07 20:17:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 20:17:14] 
[2025-10-07 20:17:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 20:17:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 20:17:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 20:17:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 20:17:14] 
[2025-10-07 20:17:14] 2025-10-08 00:16:15,980 | INFO     | ***************************************
[2025-10-07 20:17:14] 2025-10-08 00:16:16,483 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-07 20:17:14] 2025-10-08 00:16:16,491 | INFO     | sufficient remaining disk space (417020772352 B)
[2025-10-07 20:17:14] 2025-10-08 00:16:16,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 20:17:14] 2025-10-08 00:16:16,491 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 20:17:14] 2025-10-08 00:16:16,491 | INFO     | update_server=False
[2025-10-07 20:17:14] 2025-10-08 00:16:16,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 20:17:14] 2025-10-08 00:16:16,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 20:17:14] 2025-10-08 00:16:16,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 20:17:14] 2025-10-08 00:16:16,574 | INFO     | aborting loop
[2025-10-07 20:17:14] 2025-10-08 00:16:17,497 | INFO     | [job] retrieve thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:17,497 | INFO     | [job] queue monitor thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:17,554 | INFO     | [payload] validate_post thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:17,563 | INFO     | all data control threads have been joined
[2025-10-07 20:17:14] 2025-10-08 00:16:17,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 20:17:14] 2025-10-08 00:16:17,580 | INFO     | [job] job monitor thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:17,589 | INFO     | [data] copytool_in thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:17,630 | INFO     | all payload control threads have been joined
[2025-10-07 20:17:14] 2025-10-08 00:16:17,774 | INFO     | all job control threads have been joined
[2025-10-07 20:17:14] 2025-10-08 00:16:18,058 | INFO     | [job] validate thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:18,486 | INFO     | [payload] failed_post thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:18,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 20:17:14] 2025-10-08 00:16:18,542 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:18,569 | INFO     | [data] control thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:18,636 | INFO     | [payload] control thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:18,722 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:18,779 | INFO     | [job] control thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:18,790 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:19,583 | INFO     | [data] copytool_out thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:22,503 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:26,988 | INFO     | job.realtimelogging is not enabled
[2025-10-07 20:17:14] 2025-10-08 00:16:27,993 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 20:17:14] 2025-10-08 00:16:47,419 | INFO     | PID=1114163 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 20:17:14] 2025-10-08 00:16:47,419 | INFO     | .. there are 4 such processes running
[2025-10-07 20:17:14] 2025-10-08 00:16:47,419 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 20:17:14] 2025-10-08 00:16:47,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 20:17:14] 2025-10-08 00:16:47,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 20:17:14] 2025-10-08 00:17:07,134 | INFO     | [monitor] cgroup control has ended
[2025-10-07 20:17:14] 2025-10-08 00:17:09,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130952972728128)>', '<ExcThread(monitor, started 130952193890048)>']
[2025-10-07 20:17:14] 2025-10-08 00:17:09,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 20:17:14] 2025-10-08 00:17:09,523 | INFO     | [monitor] control thread has ended
[2025-10-07 20:17:14] 2025-10-08 00:17:14,266 | INFO     | all workflow threads have been joined
[2025-10-07 20:17:14] 2025-10-08 00:17:14,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 20:17:14] 2025-10-08 00:17:14,267 | INFO     | traces error code: 0
[2025-10-07 20:17:14] 2025-10-08 00:17:14,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 20:17:14] 2025-10-08 00:17:14,313 [wrapper] ==== pilot stdout END ====
[2025-10-07 20:17:14] 2025-10-08 00:17:14,315 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 20:17:14] 2025-10-08 00:17:14,316 [wrapper] pilotpid: 1114163
[2025-10-07 20:17:14] 2025-10-08 00:17:14,317 [wrapper] Pilot exit status: 0
[2025-10-07 20:17:14] 2025-10-08 00:17:14,323 [wrapper] pandaids: 6834899595
[2025-10-07 20:17:14] 2025-10-08 00:17:14,343 [wrapper] cleanup supervisor_pilot 1238776 1114164
[2025-10-07 20:17:14] 2025-10-08 00:17:14,345 [wrapper] Test setup, not cleaning
[2025-10-07 20:17:14] 2025-10-08 00:17:14,346 [wrapper] apfmon messages muted
[2025-10-07 20:17:14] 2025-10-08 00:17:14,348 [wrapper] ==== wrapper stdout END ====
[2025-10-07 20:17:14] 2025-10-08 00:17:14,349 [wrapper] ==== wrapper stderr END ====
[2025-10-07 20:17:14]  *** Error codes and diagnostics ***
[2025-10-07 20:17:14]     "exeErrorCode": 0,
[2025-10-07 20:17:14]     "exeErrorDiag": "",
[2025-10-07 20:17:14]     "pilotErrorCode": 0,
[2025-10-07 20:17:14]     "pilotErrorDiag": "",
[2025-10-07 20:17:14]  *** Listing of results directory ***
[2025-10-07 20:17:14] total 389436
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc      5112 Oct  7 09:09 queuedata.json
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc    552446 Oct  7 09:09 pilot3.tar.gz
[2025-10-07 20:17:14] -rwx------ 1 boinc boinc     36292 Oct  7 09:10 runpilot2-wrapper.sh
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc       100 Oct  7 18:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 20:17:14] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 18:38 run_atlas
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc       105 Oct  7 18:38 job.xml
[2025-10-07 20:17:14] -rw-r--r-- 2 boinc boinc 213605517 Oct  7 18:38 EVNT.46376901._004736.pool.root.1
[2025-10-07 20:17:14] -rw-r--r-- 2 boinc boinc     15120 Oct  7 18:38 start_atlas.sh
[2025-10-07 20:17:14] drwxrwx--x 2 boinc boinc      4096 Oct  7 18:38 shared
[2025-10-07 20:17:14] -rw-r--r-- 2 boinc boinc    565611 Oct  7 18:38 input.tar.gz
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc      9449 Oct  7 18:38 init_data.xml
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc         0 Oct  7 18:38 boinc_lockfile
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc      2521 Oct  7 18:38 pandaJob.out
[2025-10-07 20:17:14] -rw------- 1 boinc boinc    979864 Oct  7 18:38 agis_schedconf.cvmfs.json
[2025-10-07 20:17:14] -rw------- 1 boinc boinc   1560401 Oct  7 18:38 agis_ddmendpoints.agis.ALL.json
[2025-10-07 20:17:14] drwx------ 4 boinc boinc      4096 Oct  7 18:38 pilot3
[2025-10-07 20:17:14] -rw------- 1 boinc boinc 178963847 Oct  7 20:15 HITS.46376905._134988.pool.root.1
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc       529 Oct  7 20:16 boinc_task_state.xml
[2025-10-07 20:17:14] -rw------- 1 boinc boinc        95 Oct  7 20:16 pilot_heartbeat.json
[2025-10-07 20:17:14] -rw------- 1 boinc boinc      1018 Oct  7 20:16 memory_monitor_summary.json
[2025-10-07 20:17:14] -rw------- 1 boinc boinc    295413 Oct  7 20:16 log.46376905._134988.job.log.tgz.1
[2025-10-07 20:17:14] -rw------- 1 boinc boinc      7737 Oct  7 20:16 heartbeat.json
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc      8192 Oct  7 20:17 boinc_mmap_file
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc        27 Oct  7 20:17 wrapper_checkpoint.txt
[2025-10-07 20:17:14] -rw------- 1 boinc boinc      4903 Oct  7 20:17 pilotlog.txt
[2025-10-07 20:17:14] -rw------- 1 boinc boinc    858837 Oct  7 20:17 log.46376905._134988.job.log.1
[2025-10-07 20:17:14] -rw------- 1 boinc boinc       357 Oct  7 20:17 output.list
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc       620 Oct  7 20:17 runtime_log
[2025-10-07 20:17:14] -rw------- 1 boinc boinc   1177600 Oct  7 20:17 result.tar.gz
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc      8764 Oct  7 20:17 runtime_log.err
[2025-10-07 20:17:14] -rw------- 1 boinc boinc       643 Oct  7 20:17 JGVKDmhdMQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSjLMDmAMFjvm.diag
[2025-10-07 20:17:14] -rw-r--r-- 1 boinc boinc     21751 Oct  7 20:17 stderr.txt
[2025-10-07 20:17:14] HITS file was successfully produced:
[2025-10-07 20:17:14] -rw------- 1 boinc boinc 178963847 Oct  7 20:15 shared/HITS.pool.root.1
[2025-10-07 20:17:14]  *** Contents of shared directory: ***
[2025-10-07 20:17:14] total 385104
[2025-10-07 20:17:14] -rw-r--r-- 2 boinc boinc 213605517 Oct  7 18:38 ATLAS.root_0
[2025-10-07 20:17:14] -rw-r--r-- 2 boinc boinc     15120 Oct  7 18:38 start_atlas.sh
[2025-10-07 20:17:14] -rw-r--r-- 2 boinc boinc    565611 Oct  7 18:38 input.tar.gz
[2025-10-07 20:17:14] -rw------- 1 boinc boinc 178963847 Oct  7 20:15 HITS.pool.root.1
[2025-10-07 20:17:14] -rw------- 1 boinc boinc   1177600 Oct  7 20:17 result.tar.gz
20:17:16 (1110338): run_atlas exited; CPU time 22642.232689
20:17:16 (1110338): called boinc_finish(0)

</stderr_txt>
]]>

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