Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
18:16:29 (1042140): wrapper (7.7.26015): starting
18:16:29 (1042140): wrapper: running run_atlas (--nthreads 4)
[2025-10-07 18:16:29] Arguments: --nthreads 4
[2025-10-07 18:16:29] Threads: 4
[2025-10-07 18:16:29] Checking for CVMFS
[2025-10-07 18:16:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 18:16:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 18:16:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 18:16:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 18:16:29] 2.11.0.0 223286 9314 108884 151444 2 188 3477732 4096001 6410 130560 0 55462768 99.998 321627 2007 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 18:16:29] CVMFS is ok
[2025-10-07 18:16:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 18:16:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 18:16:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 18:16:29] Further information can be found at the LHC@home message board.
[2025-10-07 18:16:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 18:16:29] Checking for apptainer binary...
[2025-10-07 18:16:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 18:16:29] Running /usr/bin/apptainer --version
[2025-10-07 18:16:29] apptainer version 1.4.2
[2025-10-07 18:16:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 18:16:29] x32-linux2
[2025-10-07 18:16:29] apptainer works
[2025-10-07 18:16:29] Set ATHENA_PROC_NUMBER=4
[2025-10-07 18:16:29] Set ATHENA_CORE_NUMBER=4
[2025-10-07 18:16:29] Starting ATLAS job with PandaID=6834499007
[2025-10-07 18:16:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 20:01:53]  *** The last 200 lines of the pilot log: ***
[2025-10-07 20:01:53] 2025-10-08 00:01:12,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 20:01:53] 2025-10-08 00:01:12,079 | INFO     | fitting pss+swap vs Time
[2025-10-07 20:01:53] 2025-10-08 00:01:12,079 | INFO     | sum of square deviations: 338804492.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,080 | INFO     | sum of deviations: 9094825378.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,080 | INFO     | mean x: 1759878532.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,080 | INFO     | mean y: 2286322.165048544
[2025-10-07 20:01:53] 2025-10-08 00:01:12,080 | INFO     | -- intersect: -47239672721.96411
[2025-10-07 20:01:53] 2025-10-08 00:01:12,080 | INFO     | intersect: -47239672721.96411
[2025-10-07 20:01:53] 2025-10-08 00:01:12,080 | INFO     | chi2: 1.10107922870472
[2025-10-07 20:01:53] 2025-10-08 00:01:12,080 | INFO     | sum of square deviations: 291817564.5
[2025-10-07 20:01:53] 2025-10-08 00:01:12,081 | INFO     | sum of deviations: 8482589728.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,081 | INFO     | mean x: 1759878379.5
[2025-10-07 20:01:53] 2025-10-08 00:01:12,081 | INFO     | mean y: 2284333.8775510206
[2025-10-07 20:01:53] 2025-10-08 00:01:12,081 | INFO     | -- intersect: -51154082110.528114
[2025-10-07 20:01:53] 2025-10-08 00:01:12,081 | INFO     | intersect: -51154082110.528114
[2025-10-07 20:01:53] 2025-10-08 00:01:12,081 | INFO     | chi2: 1.103249079062732
[2025-10-07 20:01:53] 2025-10-08 00:01:12,081 | INFO     | current chi2=1.103249079062732 (change=-0.1970657788690326 %)
[2025-10-07 20:01:53] 2025-10-08 00:01:12,081 | INFO     | right removable region: 97
[2025-10-07 20:01:53] 2025-10-08 00:01:12,081 | INFO     | sum of square deviations: 291817564.5
[2025-10-07 20:01:53] 2025-10-08 00:01:12,082 | INFO     | sum of deviations: 186134271.5
[2025-10-07 20:01:53] 2025-10-08 00:01:12,082 | INFO     | mean x: 1759878684.5
[2025-10-07 20:01:53] 2025-10-08 00:01:12,082 | INFO     | mean y: 2314228.785714286
[2025-10-07 20:01:53] 2025-10-08 00:01:12,082 | INFO     | -- intersect: -1120214969.9931543
[2025-10-07 20:01:53] 2025-10-08 00:01:12,082 | INFO     | intersect: -1120214969.9931543
[2025-10-07 20:01:53] 2025-10-08 00:01:12,082 | INFO     | chi2: 0.011582409213642602
[2025-10-07 20:01:53] 2025-10-08 00:01:12,082 | INFO     | current chi2=0.011582409213642602 (change=98.94808575879978 %)
[2025-10-07 20:01:53] 2025-10-08 00:01:12,082 | INFO     | sum of square deviations: 249388862.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,083 | INFO     | sum of deviations: 1634839833.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,083 | INFO     | mean x: 1759878837.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,083 | INFO     | mean y: 2309000.4838709678
[2025-10-07 20:01:53] 2025-10-08 00:01:12,083 | INFO     | -- intersect: -11534373114.779617
[2025-10-07 20:01:53] 2025-10-08 00:01:12,083 | INFO     | intersect: -11534373114.779617
[2025-10-07 20:01:53] 2025-10-08 00:01:12,083 | INFO     | chi2: 0.00016911532683043252
[2025-10-07 20:01:53] 2025-10-08 00:01:12,083 | INFO     | current chi2=0.00016911532683043252 (change=98.53989507958987 %)
[2025-10-07 20:01:53] 2025-10-08 00:01:12,083 | INFO     | sum of square deviations: 211285822.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,084 | INFO     | sum of deviations: 1321509428.9999998
[2025-10-07 20:01:53] 2025-10-08 00:01:12,084 | INFO     | mean x: 1759878989.5
[2025-10-07 20:01:53] 2025-10-08 00:01:12,084 | INFO     | mean y: 2310255.977272727
[2025-10-07 20:01:53] 2025-10-08 00:01:12,084 | INFO     | -- intersect: -11005038256.613607
[2025-10-07 20:01:53] 2025-10-08 00:01:12,084 | INFO     | intersect: -11005038256.613607
[2025-10-07 20:01:53] 2025-10-08 00:01:12,084 | INFO     | chi2: 0.00014290046606436695
[2025-10-07 20:01:53] 2025-10-08 00:01:12,084 | INFO     | current chi2=0.00014290046606436695 (change=15.50117381871042 %)
[2025-10-07 20:01:53] 2025-10-08 00:01:12,084 | INFO     | left removable region: 30
[2025-10-07 20:01:53] 2025-10-08 00:01:12,084 | INFO     | sum of square deviations: 93240818.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,085 | INFO     | sum of deviations: 487567998.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,085 | INFO     | mean x: 1759879264.0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,085 | INFO     | mean y: 2312577.970149254
[2025-10-07 20:01:53] 2025-10-08 00:01:12,085 | INFO     | -- intersect: -9200318071.089508
[2025-10-07 20:01:53] 2025-10-08 00:01:12,085 | INFO     | intersect: -9200318071.089508
[2025-10-07 20:01:53] 2025-10-08 00:01:12,085 | INFO     | chi2: 6.26375110698258e-05
[2025-10-07 20:01:53] 2025-10-08 00:01:12,085 | INFO     | -- intersect: -9200318071.089508
[2025-10-07 20:01:53] 2025-10-08 00:01:12,085 | INFO     | current memory leak: 5.23 B/s (using 67 data points, chi2=0.00)
[2025-10-07 20:01:53] 2025-10-08 00:01:12,085 | INFO     | could have reported an average CPU frequency of 3827 MHz (7 samples)
[2025-10-07 20:01:53] 2025-10-08 00:01:12,086 | INFO     | ..............................
[2025-10-07 20:01:53] 2025-10-08 00:01:12,086 | INFO     | . Timing measurements:
[2025-10-07 20:01:53] 2025-10-08 00:01:12,086 | INFO     | . get job = 0 s
[2025-10-07 20:01:53] 2025-10-08 00:01:12,086 | INFO     | . initial setup = 2 s
[2025-10-07 20:01:53] 2025-10-08 00:01:12,086 | INFO     | . payload setup = 4 s
[2025-10-07 20:01:53] 2025-10-08 00:01:12,086 | INFO     | . stage-in = 0 s
[2025-10-07 20:01:53] 2025-10-08 00:01:12,086 | INFO     | . payload execution = 6246 s
[2025-10-07 20:01:53] 2025-10-08 00:01:12,086 | INFO     | . stage-out = 0 s
[2025-10-07 20:01:53] 2025-10-08 00:01:12,086 | INFO     | . log creation = 0 s
[2025-10-07 20:01:53] 2025-10-08 00:01:12,086 | INFO     | ..............................
[2025-10-07 20:01:53] 2025-10-08 00:01:12,494 | INFO     | 
[2025-10-07 20:01:53] 2025-10-08 00:01:12,494 | INFO     | job summary report
[2025-10-07 20:01:53] 2025-10-08 00:01:12,494 | INFO     | --------------------------------------------------
[2025-10-07 20:01:53] 2025-10-08 00:01:12,494 | INFO     | PanDA job id: 6834499007
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | task id: 46376905
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | errors: (none)
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | pilot state: finished 
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | transexitcode: 0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | exeerrorcode: 0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | exeerrordiag: 
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | exitcode: 0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | exitmsg: OK
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | cpuconsumptiontime: 23985 s
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | nevents: 400
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | neventsw: 0
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | pid: 1052774
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | pgrp: 1052774
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | corecount: 4
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | event service: False
[2025-10-07 20:01:53] 2025-10-08 00:01:12,495 | INFO     | sizes: {0: 2347938, 1: 2348801, 4: 2349063, 12: 2349091, 6254: 2385176, 6256: 2385176, 6260: 2385498}
[2025-10-07 20:01:53] 2025-10-08 00:01:12,496 | INFO     | --------------------------------------------------
[2025-10-07 20:01:53] 2025-10-08 00:01:12,496 | INFO     | 
[2025-10-07 20:01:53] 2025-10-08 00:01:12,496 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-07 20:01:53] 2025-10-08 00:01:12,511 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,513 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 20:01:53] 2025-10-08 00:01:12,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 20:01:53] 2025-10-08 00:01:12,513 | INFO     | job 6834499007 has completed (purged errors)
[2025-10-07 20:01:53] 2025-10-08 00:01:12,513 | INFO     | overall cleanup function is called
[2025-10-07 20:01:53] 2025-10-08 00:01:13,515 | INFO     | --- collectZombieJob: --- 10, [1052774]
[2025-10-07 20:01:53] 2025-10-08 00:01:13,516 | INFO     | zombie collector waiting for pid 1052774
[2025-10-07 20:01:53] 2025-10-08 00:01:13,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 20:01:53] 2025-10-08 00:01:13,516 | INFO     | collected zombie processes
[2025-10-07 20:01:53] 2025-10-08 00:01:13,516 | INFO     | will attempt to kill all subprocesses of pid=1052774
[2025-10-07 20:01:53] 2025-10-08 00:01:13,658 | INFO     | process IDs to be killed: [1052774] (in reverse order)
[2025-10-07 20:01:53] 2025-10-08 00:01:13,710 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 20:01:53] 2025-10-08 00:01:13,710 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 20:01:53] 2025-10-08 00:01:13,714 | INFO     | did not find any defunct processes belonging to 1052774
[2025-10-07 20:01:53] 2025-10-08 00:01:13,717 | INFO     | did not find any defunct processes belonging to 1052774
[2025-10-07 20:01:53] 2025-10-08 00:01:13,717 | INFO     | ready for new job
[2025-10-07 20:01:53] 2025-10-08 00:01:13,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 20:01:53] 2025-10-08 00:01:13,718 | INFO     | ***************************************
[2025-10-07 20:01:53] 2025-10-08 00:01:13,718 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 20:01:53] 2025-10-08 00:01:13,719 | INFO     | ***************************************
[2025-10-07 20:01:53] 2025-10-08 00:01:13,719 | INFO     | 
[2025-10-07 20:01:53] 2025-10-08 00:01:13,720 | INFO     | architecture information:
[2025-10-07 20:01:53] 2025-10-08 00:01:13,720 | INFO     | executing command: cat /etc/os-release
[2025-10-07 20:01:53] 2025-10-08 00:01:13,732 | INFO     | cat /etc/os-release:
[2025-10-07 20:01:53] NAME="CentOS Linux"
[2025-10-07 20:01:53] VERSION="7 (Core)"
[2025-10-07 20:01:53] ID="centos"
[2025-10-07 20:01:53] ID_LIKE="rhel fedora"
[2025-10-07 20:01:53] VERSION_ID="7"
[2025-10-07 20:01:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 20:01:53] ANSI_COLOR="0;31"
[2025-10-07 20:01:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 20:01:53] HOME_URL="https://www.centos.org/"
[2025-10-07 20:01:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 20:01:53] 
[2025-10-07 20:01:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 20:01:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 20:01:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 20:01:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 20:01:53] 
[2025-10-07 20:01:53] 2025-10-08 00:01:13,732 | INFO     | ***************************************
[2025-10-07 20:01:53] 2025-10-08 00:01:14,234 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-07 20:01:53] 2025-10-08 00:01:14,246 | INFO     | sufficient remaining disk space (415364022272 B)
[2025-10-07 20:01:53] 2025-10-08 00:01:14,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 20:01:53] 2025-10-08 00:01:14,247 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 20:01:53] 2025-10-08 00:01:14,247 | INFO     | update_server=False
[2025-10-07 20:01:53] 2025-10-08 00:01:14,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 20:01:53] 2025-10-08 00:01:14,307 | INFO     | all data control threads have been joined
[2025-10-07 20:01:53] 2025-10-08 00:01:14,481 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 20:01:53] 2025-10-08 00:01:14,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 20:01:53] 2025-10-08 00:01:14,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 20:01:53] 2025-10-08 00:01:14,959 | INFO     | aborting loop
[2025-10-07 20:01:53] 2025-10-08 00:01:15,006 | INFO     | all payload control threads have been joined
[2025-10-07 20:01:53] 2025-10-08 00:01:15,250 | INFO     | [job] retrieve thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:15,312 | INFO     | [data] control thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:15,413 | INFO     | all job control threads have been joined
[2025-10-07 20:01:53] 2025-10-08 00:01:15,438 | INFO     | [payload] failed_post thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:15,811 | INFO     | [data] copytool_in thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:15,891 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:15,962 | INFO     | [job] job monitor thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:16,010 | INFO     | [payload] control thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:16,415 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:16,416 | INFO     | [job] control thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:16,418 | INFO     | [job] validate thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:16,486 | INFO     | [data] copytool_out thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:16,556 | INFO     | [payload] validate_post thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:16,618 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:17,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 20:01:53] 2025-10-08 00:01:18,165 | INFO     | [job] queue monitor thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:18,647 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:24,970 | INFO     | job.realtimelogging is not enabled
[2025-10-07 20:01:53] 2025-10-08 00:01:25,975 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 20:01:53] 2025-10-08 00:01:35,002 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-07 20:01:53] 2025-10-08 00:01:43,754 | INFO     | PID=1045969 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 20:01:53] 2025-10-08 00:01:43,754 | INFO     | .. there are 7 such processes running
[2025-10-07 20:01:53] 2025-10-08 00:01:43,754 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 20:01:53] 2025-10-08 00:01:43,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 20:01:53] 2025-10-08 00:01:43,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 20:01:53] 2025-10-08 00:01:47,666 | INFO     | [monitor] cgroup control has ended
[2025-10-07 20:01:53] 2025-10-08 00:01:47,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124503527765824)>', '<ExcThread(monitor, started 124502897841920)>']
[2025-10-07 20:01:53] 2025-10-08 00:01:48,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 20:01:53] 2025-10-08 00:01:48,775 | INFO     | [monitor] control thread has ended
[2025-10-07 20:01:53] 2025-10-08 00:01:52,978 | INFO     | all workflow threads have been joined
[2025-10-07 20:01:53] 2025-10-08 00:01:52,978 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 20:01:53] 2025-10-08 00:01:52,979 | INFO     | traces error code: 0
[2025-10-07 20:01:53] 2025-10-08 00:01:52,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 20:01:53] 2025-10-08 00:01:53,045 [wrapper] ==== pilot stdout END ====
[2025-10-07 20:01:53] 2025-10-08 00:01:53,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 20:01:53] 2025-10-08 00:01:53,049 [wrapper] pilotpid: 1045969
[2025-10-07 20:01:53] 2025-10-08 00:01:53,051 [wrapper] Pilot exit status: 0
[2025-10-07 20:01:53] 2025-10-08 00:01:53,057 [wrapper] pandaids: 6834499007
[2025-10-07 20:01:53] 2025-10-08 00:01:53,091 [wrapper] cleanup supervisor_pilot 1234357 1045970
[2025-10-07 20:01:53] 2025-10-08 00:01:53,093 [wrapper] Test setup, not cleaning
[2025-10-07 20:01:53] 2025-10-08 00:01:53,095 [wrapper] apfmon messages muted
[2025-10-07 20:01:53] 2025-10-08 00:01:53,097 [wrapper] ==== wrapper stdout END ====
[2025-10-07 20:01:53] 2025-10-08 00:01:53,099 [wrapper] ==== wrapper stderr END ====
[2025-10-07 20:01:53]  *** Error codes and diagnostics ***
[2025-10-07 20:01:53]     "exeErrorCode": 0,
[2025-10-07 20:01:53]     "exeErrorDiag": "",
[2025-10-07 20:01:53]     "pilotErrorCode": 0,
[2025-10-07 20:01:53]     "pilotErrorDiag": "",
[2025-10-07 20:01:53]  *** Listing of results directory ***
[2025-10-07 20:01:53] total 386424
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc    552446 Oct  7 07:55 pilot3.tar.gz
[2025-10-07 20:01:53] -rwx------ 1 boinc boinc     36292 Oct  7 08:30 runpilot2-wrapper.sh
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc      5112 Oct  7 08:30 queuedata.json
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc       100 Oct  7 18:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 20:01:53] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 18:16 run_atlas
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc       105 Oct  7 18:16 job.xml
[2025-10-07 20:01:53] -rw-r--r-- 2 boinc boinc     15120 Oct  7 18:16 start_atlas.sh
[2025-10-07 20:01:53] drwxrwx--x 2 boinc boinc      4096 Oct  7 18:16 shared
[2025-10-07 20:01:53] -rw-r--r-- 2 boinc boinc    565601 Oct  7 18:16 input.tar.gz
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc      9449 Oct  7 18:16 init_data.xml
[2025-10-07 20:01:53] -rw-r--r-- 2 boinc boinc 213562113 Oct  7 18:16 EVNT.46376901._003848.pool.root.1
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc         0 Oct  7 18:16 boinc_lockfile
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc      2519 Oct  7 18:16 pandaJob.out
[2025-10-07 20:01:53] -rw------- 1 boinc boinc    977512 Oct  7 18:16 agis_schedconf.cvmfs.json
[2025-10-07 20:01:53] -rw------- 1 boinc boinc   1560401 Oct  7 18:16 agis_ddmendpoints.agis.ALL.json
[2025-10-07 20:01:53] drwx------ 4 boinc boinc      4096 Oct  7 18:16 pilot3
[2025-10-07 20:01:53] -rw------- 1 boinc boinc 175819771 Oct  7 20:00 HITS.46376905._134442.pool.root.1
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc       529 Oct  7 20:00 boinc_task_state.xml
[2025-10-07 20:01:53] -rw------- 1 boinc boinc        95 Oct  7 20:00 pilot_heartbeat.json
[2025-10-07 20:01:53] -rw------- 1 boinc boinc      1019 Oct  7 20:01 memory_monitor_summary.json
[2025-10-07 20:01:53] -rw------- 1 boinc boinc    293904 Oct  7 20:01 log.46376905._134442.job.log.tgz.1
[2025-10-07 20:01:53] -rw------- 1 boinc boinc      7730 Oct  7 20:01 heartbeat.json
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc      8192 Oct  7 20:01 boinc_mmap_file
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc        27 Oct  7 20:01 wrapper_checkpoint.txt
[2025-10-07 20:01:53] -rw------- 1 boinc boinc      4903 Oct  7 20:01 pilotlog.txt
[2025-10-07 20:01:53] -rw------- 1 boinc boinc    919551 Oct  7 20:01 log.46376905._134442.job.log.1
[2025-10-07 20:01:53] -rw------- 1 boinc boinc       357 Oct  7 20:01 output.list
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc       620 Oct  7 20:01 runtime_log
[2025-10-07 20:01:53] -rw------- 1 boinc boinc   1228800 Oct  7 20:01 result.tar.gz
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc      8764 Oct  7 20:01 runtime_log.err
[2025-10-07 20:01:53] -rw------- 1 boinc boinc       643 Oct  7 20:01 HQ9KDmk0LQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmk4WNDmVlquDn.diag
[2025-10-07 20:01:53] -rw-r--r-- 1 boinc boinc     20943 Oct  7 20:01 stderr.txt
[2025-10-07 20:01:53] HITS file was successfully produced:
[2025-10-07 20:01:53] -rw------- 1 boinc boinc 175819771 Oct  7 20:00 shared/HITS.pool.root.1
[2025-10-07 20:01:53]  *** Contents of shared directory: ***
[2025-10-07 20:01:53] total 382040
[2025-10-07 20:01:53] -rw-r--r-- 2 boinc boinc     15120 Oct  7 18:16 start_atlas.sh
[2025-10-07 20:01:53] -rw-r--r-- 2 boinc boinc    565601 Oct  7 18:16 input.tar.gz
[2025-10-07 20:01:53] -rw-r--r-- 2 boinc boinc 213562113 Oct  7 18:16 ATLAS.root_0
[2025-10-07 20:01:53] -rw------- 1 boinc boinc 175819771 Oct  7 20:00 HITS.pool.root.1
[2025-10-07 20:01:53] -rw------- 1 boinc boinc   1228800 Oct  7 20:01 result.tar.gz
20:01:54 (1042140): run_atlas exited; CPU time 24076.242634
20:01:54 (1042140): called boinc_finish(0)

</stderr_txt>
]]>

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