Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-07 19:50:23 (28092): vboxwrapper version 26210
2025-10-07 19:50:23 (28092): BOINC client version: 7.9.3
2025-10-07 19:50:24 (28092): Detected: VirtualBox VboxManage Interface (Version: 5.2.42)
2025-10-07 19:50:24 (28092): Successfully copied 'init_data.xml' to the shared directory.
2025-10-07 19:50:24 (28092): Create VM. (boinc_01d2b1b452bde24f, slot#0)
2025-10-07 19:50:24 (28092): Setting Memory Size for VM. (4300MB)
2025-10-07 19:50:24 (28092): Setting CPU Count for VM. (3)
2025-10-07 19:50:24 (28092): Setting Chipset Options for VM.
2025-10-07 19:50:24 (28092): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-07 19:50:24 (28092): Setting Boot Options for VM.
2025-10-07 19:50:25 (28092): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-07 19:50:25 (28092): Enabling VM Network Access.
2025-10-07 19:50:25 (28092): Disabling USB Support for VM.
2025-10-07 19:50:25 (28092): Disabling COM Port Support for VM.
2025-10-07 19:50:25 (28092): Disabling LPT Port Support for VM.
2025-10-07 19:50:25 (28092): Disabling Audio Support for VM.
2025-10-07 19:50:25 (28092): Disabling Clipboard Support for VM.
2025-10-07 19:50:26 (28092): Disabling Drag and Drop Support for VM.
2025-10-07 19:50:26 (28092): Adding storage controller(s) to VM.
2025-10-07 19:50:26 (28092): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-07 19:50:26 (28092): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-07 19:50:26 (28092): forwarding host port 52775 to guest port 80
2025-10-07 19:50:27 (28092): Enabling remote desktop for VM.
2025-10-07 19:50:27 (28092): Required extension pack not installed, remote desktop not enabled.
2025-10-07 19:50:27 (28092): Enabling shared directory for VM.
2025-10-07 19:50:27 (28092): Starting VM using VBoxManage interface. (boinc_01d2b1b452bde24f, slot#0)
2025-10-07 19:50:28 (28092): Successfully started VM. (PID = '28482')
2025-10-07 19:50:28 (28092): Reporting VM Process ID to BOINC.
2025-10-07 19:50:28 (28092): Guest Log: BIOS: VirtualBox 5.2.41
2025-10-07 19:50:28 (28092): Guest Log: CPUID EDX: 0x178bfbff
2025-10-07 19:50:28 (28092): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-07 19:50:28 (28092): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-07 19:50:28 (28092): Detected: Web Application Enabled (http://localhost:52775)
2025-10-07 19:50:28 (28092): Preference change detected
2025-10-07 19:50:28 (28092): Setting CPU throttle for VM. (75%)
2025-10-07 19:50:28 (28092): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-07 19:50:30 (28092): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-07 19:50:30 (28092): Guest Log: BIOS: Booting from Hard Disk...
2025-10-07 19:50:34 (28092): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-07 19:50:34 (28092): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-07 19:50:34 (28092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-07 19:50:40 (28092): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-07 19:50:40 (28092): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-07 19:50:54 (28092): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-07 19:50:54 (28092): Guest Log: 00:00:00.000410 main     Log opened 2025-10-07T17:50:52.439708000Z
2025-10-07 19:50:54 (28092): Guest Log: 00:00:00.000590 main     OS Product: Linux
2025-10-07 19:50:54 (28092): Guest Log: 00:00:00.000653 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-07 19:50:54 (28092): Guest Log: 00:00:00.000705 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-07 19:50:54 (28092): Guest Log: 00:00:00.000774 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-07 19:50:54 (28092): Guest Log: 00:00:00.000776 main     Process ID: 1255
2025-10-07 19:50:54 (28092): Guest Log: 00:00:00.000777 main     Package type: LINUX_64BITS_GENERIC
2025-10-07 19:50:54 (28092): Guest Log: 00:00:00.003748 main     5.2.32 r132073 started. Verbose level = 0
2025-10-07 19:50:54 (28092): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-07 19:50:54 (28092): Guest Log: [INFO] Mounting shared directory
2025-10-07 19:50:54 (28092): Guest Log: [INFO] Checking for init_data.xml
2025-10-07 19:51:02 (28092): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-07 19:51:02 (28092): Guest Log: [INFO] Detected branch: prod
2025-10-07 19:51:02 (28092): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-07 19:51:02 (28092): Guest Log: Copying input files
2025-10-07 19:51:04 (28092): Guest Log: Copied input files into RunAtlas.
2025-10-07 19:51:04 (28092): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-07 19:51:04 (28092): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-07 19:51:04 (28092): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-07 19:51:04 (28092): Guest Log: Further information can be found at the LHC@home message board.
2025-10-07 19:51:18 (28092): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-07 19:51:18 (28092): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-07 19:51:18 (28092): Guest Log: 2.6.3.0 1530 0 32152 151442 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-07 19:51:20 (28092): Guest Log: copied the webapp to /var/www
2025-10-07 19:51:20 (28092): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-07 19:51:20 (28092): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-07 19:51:20 (28092): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-07 19:51:21 (28092): Guest Log:  *** Starting ATLAS job. (PandaID=6833159919 taskID=46376905) ***
2025-10-07 21:29:28 (28092): Status Report: Elapsed Time: '6000.000000'
2025-10-07 21:29:28 (28092): Status Report: CPU Time: '12504.920000'
2025-10-07 23:08:29 (28092): Status Report: Elapsed Time: '12000.000000'
2025-10-07 23:08:29 (28092): Status Report: CPU Time: '25889.220000'
2025-10-08 00:47:29 (28092): Status Report: Elapsed Time: '18000.000000'
2025-10-08 00:47:29 (28092): Status Report: CPU Time: '39276.300000'
2025-10-08 02:26:30 (28092): Status Report: Elapsed Time: '24000.000000'
2025-10-08 02:26:30 (28092): Status Report: CPU Time: '52658.370000'
2025-10-08 03:03:58 (28092): Guest Log:  *** Job finished ***
2025-10-08 03:03:58 (28092): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:19,850 | INFO     | job.realtimelogging is not enabled
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:20,851 | INFO     | [payload] run_realtimelog thread has finished
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:49,727 | INFO     | [monitor] cgroup control has ended
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:50,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453065791296)>', '<ExcThread(monitor, started 140452233717504)>']
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:50,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:50,825 | INFO     | [monitor] control thread has ended
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,574 | INFO     | all workflow threads have been joined
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,574 | INFO     | end of generic workflow (traces error code: 0)
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,575 | INFO     | traces error code: 0
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,743 [wrapper] ==== pilot stdout END ====
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,752 [wrapper] ==== wrapper stdout RESUME ====
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,761 [wrapper] pilotpid: 5902
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,770 [wrapper] Pilot exit status: 0
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,843 [wrapper] pandaids: 6833159919
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,896 [wrapper] cleanup supervisor_pilot 29410 5903
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,908 [wrapper] Test setup, not cleaning
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,918 [wrapper] apfmon messages muted
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,929 [wrapper] ==== wrapper stdout END ====
2025-10-08 03:03:58 (28092): Guest Log: 2025-10-08 01:03:55,939 [wrapper] ==== wrapper stderr END ====
2025-10-08 03:03:58 (28092): Guest Log:  *** Error codes and diagnostics ***
2025-10-08 03:03:58 (28092): Guest Log:     "exeErrorCode": 0,
2025-10-08 03:03:58 (28092): Guest Log:     "exeErrorDiag": "",
2025-10-08 03:03:58 (28092): Guest Log:     "pilotErrorCode": 0,
2025-10-08 03:03:58 (28092): Guest Log:     "pilotErrorDiag": "",
2025-10-08 03:03:58 (28092): Guest Log:  *** Listing of results directory ***
2025-10-08 03:03:58 (28092): Guest Log: total 190424
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  7 00:56 pilot3.tar.gz
2025-10-08 03:03:58 (28092): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  7 01:03 runpilot2-wrapper.sh
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  7 01:03 queuedata.json
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 atlas atlas    565598 Oct  7 17:51 input.tar.gz
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 atlas atlas      6150 Oct  7 17:51 init_data.xml
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct  7 17:51 start_atlas.sh
2025-10-08 03:03:58 (28092): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  7 17:51 EVNT.46376901._004618.pool.root.1 -> /data/./ATLAS.root_0
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Oct  7 17:51 pandaJob.out
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas    977520 Oct  7 17:52 agis_schedconf.cvmfs.json
2025-10-08 03:03:58 (28092): Guest Log: drwx------. 4 atlas atlas      4096 Oct  7 17:52 pilot3
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas 183657052 Oct  8 01:02 HITS.46376905._124399.pool.root.1
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas      1039 Oct  8 01:02 memory_monitor_summary.json
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  8 01:02 agis_ddmendpoints.agis.ALL.json
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas    530209 Oct  8 01:02 log.46376905._124399.job.log.tgz.1
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas      7818 Oct  8 01:03 heartbeat.json
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas        95 Oct  8 01:03 pilot_heartbeat.json
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas      4684 Oct  8 01:03 pilotlog.txt
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas   3228016 Oct  8 01:03 log.46376905._124399.job.log.1
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas       357 Oct  8 01:03 output.list
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  8 01:03 runtime_log
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas   3778560 Oct  8 01:03 result.tar.gz
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 atlas atlas      8649 Oct  8 01:03 runtime_log.err
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas       662 Oct  8 01:03 isgLDmTIBQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqaKMDmSSL7lm.diag
2025-10-08 03:03:58 (28092): Guest Log: Looking for outputfile HITS.46376905._124399.pool.root.1
2025-10-08 03:03:58 (28092): Guest Log: HITS file was successfully produced
2025-10-08 03:03:58 (28092): Guest Log: -rw-------. 1 atlas atlas 183657052 Oct  8 01:02 /home/atlas/RunAtlas/HITS.46376905._124399.pool.root.1
2025-10-08 03:03:58 (28092): Guest Log: Successfully finished the ATLAS job!
2025-10-08 03:03:58 (28092): Guest Log: Copying the results back to the shared directory!
2025-10-08 03:03:58 (28092): Guest Log:  *** Contents of shared directory: ***
2025-10-08 03:03:58 (28092): Guest Log: total 215132
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 root root 215915220 Oct  7 17:50 ATLAS.root_0
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 root root      6150 Oct  7 17:50 init_data.xml
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 root root    565598 Oct  7 17:50 input.tar.gz
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 root root   3778560 Oct  8 01:03 result.tar.gz
2025-10-08 03:03:58 (28092): Guest Log: -rw-r--r--. 1 root root     15120 Oct  7 17:50 start_atlas.sh
2025-10-08 03:03:58 (28092): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-08 03:03:58 (28092): VM Completion File Detected.
2025-10-08 03:03:58 (28092): Powering off VM.
2025-10-08 03:03:59 (28092): Successfully stopped VM.
2025-10-08 03:03:59 (28092): Deregistering VM. (boinc_01d2b1b452bde24f, slot#0)
2025-10-08 03:03:59 (28092): Removing network bandwidth throttle group from VM.
2025-10-08 03:03:59 (28092): Removing VM from VirtualBox.
2025-10-08 03:04:05 (28092): called boinc_finish(0)

</stderr_txt>
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