Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
17:54:54 (987498): wrapper (7.7.26015): starting
17:54:54 (987498): wrapper: running run_atlas (--nthreads 4)
[2025-10-07 17:54:54] Arguments: --nthreads 4
[2025-10-07 17:54:54] Threads: 4
[2025-10-07 17:54:54] Checking for CVMFS
[2025-10-07 17:54:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 17:54:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 17:54:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 17:54:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 17:54:54] 2.11.0.0 223286 9292 107512 151444 0 57 3473354 4096001 6454 130560 0 55292572 99.998 321624 2010 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 17:54:54] CVMFS is ok
[2025-10-07 17:54:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 17:54:54] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 17:54:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 17:54:54] Further information can be found at the LHC@home message board.
[2025-10-07 17:54:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 17:54:54] Checking for apptainer binary...
[2025-10-07 17:54:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 17:54:54] Running /usr/bin/apptainer --version
[2025-10-07 17:54:54] apptainer version 1.4.2
[2025-10-07 17:54:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 17:54:54] x32-linux2
[2025-10-07 17:54:54] apptainer works
[2025-10-07 17:54:54] Set ATHENA_PROC_NUMBER=4
[2025-10-07 17:54:54] Set ATHENA_CORE_NUMBER=4
[2025-10-07 17:54:54] Starting ATLAS job with PandaID=6834656236
[2025-10-07 17:54:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 19:35:18]  *** The last 200 lines of the pilot log: ***
[2025-10-07 19:35:18]  replicas=None
[2025-10-07 19:35:18]  scope=mc23_13p6TeV
[2025-10-07 19:35:18]  status=None
[2025-10-07 19:35:18]  status_code=0
[2025-10-07 19:35:18]  storage_token=
[2025-10-07 19:35:18]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6834656236/log.46376905._134664.job.log.tgz.1
[2025-10-07 19:35:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/97/log.46376905._134664.job.log.tgz.1
[2025-10-07 19:35:18]  workdir=None
[2025-10-07 19:35:18] ]
[2025-10-07 19:35:18] 2025-10-07 23:34:38,798 | INFO     | transferring file log.46376905._134664.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6834656236/log.46376905._134664.job.log.tgz.1 to /var/lib/boinc
[2025-10-07 19:35:18] 2025-10-07 23:34:38,798 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6834656236/log.46376905._134664.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.463769
[2025-10-07 19:35:18] 2025-10-07 23:34:38,814 | INFO     | adding to output.list: log.46376905._134664.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/97/log.46376905._134664.job.log.tg
[2025-10-07 19:35:18] 2025-10-07 23:34:38,815 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 19:35:18] 2025-10-07 23:34:38,815 | INFO     | summary of transferred files:
[2025-10-07 19:35:18] 2025-10-07 23:34:38,815 | INFO     |  -- lfn=log.46376905._134664.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 19:35:18] 2025-10-07 23:34:38,815 | INFO     | stage-out finished correctly
[2025-10-07 19:35:18] 2025-10-07 23:34:39,987 | INFO     | time since job start (5976s) is within the limit (172800.0s)
[2025-10-07 19:35:18] 2025-10-07 23:34:41,245 | WARNING  | process 998129 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 19:35:18] 2025-10-07 23:34:41,245 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6834656236/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 19:35:18] 2025-10-07 23:34:41,246 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 19:35:18] 2025-10-07 23:34:41,428 | INFO     | job 6834656236 has state=finished
[2025-10-07 19:35:18] 2025-10-07 23:34:41,428 | INFO     | preparing for final server update for job 6834656236 in state='finished'
[2025-10-07 19:35:18] 2025-10-07 23:34:41,429 | INFO     | this job has now completed (state=finished)
[2025-10-07 19:35:18] 2025-10-07 23:34:41,429 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 19:35:18] 2025-10-07 23:34:41,429 | INFO     | log transfer has been attempted: DONE
[2025-10-07 19:35:18] 2025-10-07 23:34:41,429 | INFO     | job 6834656236 has finished - writing final server update
[2025-10-07 19:35:18] 2025-10-07 23:34:41,429 | INFO     | total number of processed events: 400 (read)
[2025-10-07 19:35:18] 2025-10-07 23:34:41,430 | INFO     | executing command: lscpu
[2025-10-07 19:35:18] 2025-10-07 23:34:41,459 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 19:35:18] 2025-10-07 23:34:41,474 | INFO     | number of running child processes to parent process 998129: 1
[2025-10-07 19:35:18] 2025-10-07 23:34:41,475 | INFO     | maximum number of monitored processes: 6
[2025-10-07 19:35:18] 2025-10-07 23:34:41,991 | INFO     | time since job start (5978s) is within the limit (172800.0s)
[2025-10-07 19:35:18] 2025-10-07 23:34:43,978 | INFO     | monitor loop #447: job 0:6834656236 is in state 'finished'
[2025-10-07 19:35:18] 2025-10-07 23:34:43,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 19:35:18] 2025-10-07 23:34:43,994 | INFO     | time since job start (5980s) is within the limit (172800.0s)
[2025-10-07 19:35:18] 2025-10-07 23:34:44,831 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 19:35:18] 2025-10-07 23:34:44,835 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3793.9478750000003
[2025-10-07 19:35:18] 2025-10-07 23:34:44,839 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6834656236/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 19:35:18] 2025-10-07 23:34:44,840 | INFO     | extracted standard info from prmon json
[2025-10-07 19:35:18] 2025-10-07 23:34:44,840 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 19:35:18] 2025-10-07 23:34:44,840 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 19:35:18] 2025-10-07 23:34:44,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 19:35:18] 2025-10-07 23:34:44,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 19:35:18] 2025-10-07 23:34:44,842 | INFO     | fitting pss+swap vs Time
[2025-10-07 19:35:18] 2025-10-07 23:34:44,842 | INFO     | sum of square deviations: 233641590.0
[2025-10-07 19:35:18] 2025-10-07 23:34:44,842 | INFO     | sum of deviations: -16071341087.999996
[2025-10-07 19:35:18] 2025-10-07 23:34:44,843 | INFO     | mean x: 1759877177.0
[2025-10-07 19:35:18] 2025-10-07 23:34:44,843 | INFO     | mean y: 2384795.769230769
[2025-10-07 19:35:18] 2025-10-07 23:34:44,843 | INFO     | -- intersect: 121057828668.3843
[2025-10-07 19:35:18] 2025-10-07 23:34:44,843 | INFO     | intersect: 121057828668.3843
[2025-10-07 19:35:18] 2025-10-07 23:34:44,843 | INFO     | chi2: 0.14030188654137707
[2025-10-07 19:35:18] 2025-10-07 23:34:44,843 | INFO     | -- intersect: 121057828668.3843
[2025-10-07 19:35:18] 2025-10-07 23:34:44,843 | INFO     | current memory leak: -68.79 B/s (using 91 data points, chi2=0.14)
[2025-10-07 19:35:18] 2025-10-07 23:34:44,843 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-10-07 19:35:18] 2025-10-07 23:34:44,843 | INFO     | ..............................
[2025-10-07 19:35:18] 2025-10-07 23:34:44,844 | INFO     | . Timing measurements:
[2025-10-07 19:35:18] 2025-10-07 23:34:44,844 | INFO     | . get job = 0 s
[2025-10-07 19:35:18] 2025-10-07 23:34:44,844 | INFO     | . initial setup = 2 s
[2025-10-07 19:35:18] 2025-10-07 23:34:44,844 | INFO     | . payload setup = 4 s
[2025-10-07 19:35:18] 2025-10-07 23:34:44,844 | INFO     | . stage-in = 0 s
[2025-10-07 19:35:18] 2025-10-07 23:34:44,844 | INFO     | . payload execution = 5951 s
[2025-10-07 19:35:18] 2025-10-07 23:34:44,844 | INFO     | . stage-out = 0 s
[2025-10-07 19:35:18] 2025-10-07 23:34:44,844 | INFO     | . log creation = 0 s
[2025-10-07 19:35:18] 2025-10-07 23:34:44,844 | INFO     | ..............................
[2025-10-07 19:35:18] 2025-10-07 23:34:44,911 | INFO     | 
[2025-10-07 19:35:18] 2025-10-07 23:34:44,911 | INFO     | job summary report
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | --------------------------------------------------
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | PanDA job id: 6834656236
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | task id: 46376905
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | errors: (none)
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | pilot state: finished 
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | transexitcode: 0
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | exeerrorcode: 0
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | exeerrordiag: 
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | exitcode: 0
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | exitmsg: OK
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | cpuconsumptiontime: 22878 s
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | nevents: 400
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | neventsw: 0
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | pid: 998129
[2025-10-07 19:35:18] 2025-10-07 23:34:44,912 | INFO     | pgrp: 998129
[2025-10-07 19:35:18] 2025-10-07 23:34:44,913 | INFO     | corecount: 4
[2025-10-07 19:35:18] 2025-10-07 23:34:44,913 | INFO     | event service: False
[2025-10-07 19:35:18] 2025-10-07 23:34:44,913 | INFO     | sizes: {0: 2348771, 4: 2349033, 11: 2349061, 5960: 2375920, 5962: 2384932, 5964: 2384988, 5968: 2385310}
[2025-10-07 19:35:18] 2025-10-07 23:34:44,913 | INFO     | --------------------------------------------------
[2025-10-07 19:35:18] 2025-10-07 23:34:44,913 | INFO     | 
[2025-10-07 19:35:18] 2025-10-07 23:34:44,913 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | job 6834656236 has completed (purged errors)
[2025-10-07 19:35:18] 2025-10-07 23:34:44,930 | INFO     | overall cleanup function is called
[2025-10-07 19:35:18] 2025-10-07 23:34:45,934 | INFO     | --- collectZombieJob: --- 10, [998129]
[2025-10-07 19:35:18] 2025-10-07 23:34:45,934 | INFO     | zombie collector waiting for pid 998129
[2025-10-07 19:35:18] 2025-10-07 23:34:45,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 19:35:18] 2025-10-07 23:34:45,934 | INFO     | collected zombie processes
[2025-10-07 19:35:18] 2025-10-07 23:34:45,935 | INFO     | will attempt to kill all subprocesses of pid=998129
[2025-10-07 19:35:18] 2025-10-07 23:34:46,078 | INFO     | process IDs to be killed: [998129] (in reverse order)
[2025-10-07 19:35:18] 2025-10-07 23:34:46,139 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 19:35:18] 2025-10-07 23:34:46,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 19:35:18] 2025-10-07 23:34:46,143 | INFO     | did not find any defunct processes belonging to 998129
[2025-10-07 19:35:18] 2025-10-07 23:34:46,147 | INFO     | did not find any defunct processes belonging to 998129
[2025-10-07 19:35:18] 2025-10-07 23:34:46,147 | INFO     | ready for new job
[2025-10-07 19:35:18] 2025-10-07 23:34:46,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 19:35:18] 2025-10-07 23:34:46,148 | INFO     | ***************************************
[2025-10-07 19:35:18] 2025-10-07 23:34:46,149 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 19:35:18] 2025-10-07 23:34:46,149 | INFO     | ***************************************
[2025-10-07 19:35:18] 2025-10-07 23:34:46,149 | INFO     | 
[2025-10-07 19:35:18] 2025-10-07 23:34:46,150 | INFO     | architecture information:
[2025-10-07 19:35:18] 2025-10-07 23:34:46,150 | INFO     | executing command: cat /etc/os-release
[2025-10-07 19:35:18] 2025-10-07 23:34:46,162 | INFO     | cat /etc/os-release:
[2025-10-07 19:35:18] NAME="CentOS Linux"
[2025-10-07 19:35:18] VERSION="7 (Core)"
[2025-10-07 19:35:18] ID="centos"
[2025-10-07 19:35:18] ID_LIKE="rhel fedora"
[2025-10-07 19:35:18] VERSION_ID="7"
[2025-10-07 19:35:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 19:35:18] ANSI_COLOR="0;31"
[2025-10-07 19:35:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 19:35:18] HOME_URL="https://www.centos.org/"
[2025-10-07 19:35:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 19:35:18] 
[2025-10-07 19:35:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 19:35:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 19:35:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 19:35:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 19:35:18] 
[2025-10-07 19:35:18] 2025-10-07 23:34:46,162 | INFO     | ***************************************
[2025-10-07 19:35:18] 2025-10-07 23:34:46,665 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-07 19:35:18] 2025-10-07 23:34:46,679 | INFO     | sufficient remaining disk space (414723342336 B)
[2025-10-07 19:35:18] 2025-10-07 23:34:46,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 19:35:18] 2025-10-07 23:34:46,680 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 19:35:18] 2025-10-07 23:34:46,680 | INFO     | update_server=False
[2025-10-07 19:35:18] 2025-10-07 23:34:46,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 19:35:18] 2025-10-07 23:34:46,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 19:35:18] 2025-10-07 23:34:46,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 19:35:18] 2025-10-07 23:34:46,942 | INFO     | all job control threads have been joined
[2025-10-07 19:35:18] 2025-10-07 23:34:47,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 19:35:18] 2025-10-07 23:34:47,428 | INFO     | all data control threads have been joined
[2025-10-07 19:35:18] 2025-10-07 23:34:47,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 19:35:18] 2025-10-07 23:34:47,482 | INFO     | aborting loop
[2025-10-07 19:35:18] 2025-10-07 23:34:47,682 | INFO     | [job] retrieve thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:47,683 | INFO     | [job] queue monitor thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:47,782 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:47,946 | INFO     | [job] control thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:47,998 | INFO     | [data] copytool_in thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:48,093 | INFO     | all payload control threads have been joined
[2025-10-07 19:35:18] 2025-10-07 23:34:48,150 | INFO     | [payload] validate_post thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:48,362 | INFO     | [job] validate thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:48,390 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:48,410 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:48,430 | INFO     | [data] control thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:48,486 | INFO     | [job] job monitor thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:48,902 | INFO     | [data] copytool_out thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:49,062 | INFO     | [payload] failed_post thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:49,098 | INFO     | [payload] control thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:51,322 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:34:56,926 | INFO     | job.realtimelogging is not enabled
[2025-10-07 19:35:18] 2025-10-07 23:34:57,931 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 19:35:18] 2025-10-07 23:35:12,378 | INFO     | [monitor] cgroup control has ended
[2025-10-07 19:35:18] 2025-10-07 23:35:13,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138642539956032)>', '<ExcThread(monitor, started 138642056005376)>']
[2025-10-07 19:35:18] 2025-10-07 23:35:17,238 | INFO     | PID=991325 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 19:35:18] 2025-10-07 23:35:17,238 | INFO     | .. there are 8 such processes running
[2025-10-07 19:35:18] 2025-10-07 23:35:17,238 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 19:35:18] 2025-10-07 23:35:17,238 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 19:35:18] 2025-10-07 23:35:17,238 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 19:35:18] 2025-10-07 23:35:17,238 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 19:35:18] 2025-10-07 23:35:17,239 | INFO     | [monitor] control thread has ended
[2025-10-07 19:35:18] 2025-10-07 23:35:18,250 | INFO     | all workflow threads have been joined
[2025-10-07 19:35:18] 2025-10-07 23:35:18,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 19:35:18] 2025-10-07 23:35:18,251 | INFO     | traces error code: 0
[2025-10-07 19:35:18] 2025-10-07 23:35:18,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 19:35:18] 2025-10-07 23:35:18,339 [wrapper] ==== pilot stdout END ====
[2025-10-07 19:35:18] 2025-10-07 23:35:18,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 19:35:18] 2025-10-07 23:35:18,343 [wrapper] pilotpid: 991325
[2025-10-07 19:35:18] 2025-10-07 23:35:18,345 [wrapper] Pilot exit status: 0
[2025-10-07 19:35:18] 2025-10-07 23:35:18,353 [wrapper] pandaids: 6834656236
[2025-10-07 19:35:18] 2025-10-07 23:35:18,390 [wrapper] cleanup supervisor_pilot 1188059 991326
[2025-10-07 19:35:18] 2025-10-07 23:35:18,392 [wrapper] Test setup, not cleaning
[2025-10-07 19:35:18] 2025-10-07 23:35:18,394 [wrapper] apfmon messages muted
[2025-10-07 19:35:18] 2025-10-07 23:35:18,397 [wrapper] ==== wrapper stdout END ====
[2025-10-07 19:35:18] 2025-10-07 23:35:18,399 [wrapper] ==== wrapper stderr END ====
[2025-10-07 19:35:18]  *** Error codes and diagnostics ***
[2025-10-07 19:35:18]     "exeErrorCode": 0,
[2025-10-07 19:35:18]     "exeErrorDiag": "",
[2025-10-07 19:35:18]     "pilotErrorCode": 0,
[2025-10-07 19:35:18]     "pilotErrorDiag": "",
[2025-10-07 19:35:18]  *** Listing of results directory ***
[2025-10-07 19:35:18] total 391344
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc      5112 Oct  7 08:41 queuedata.json
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc    552446 Oct  7 08:41 pilot3.tar.gz
[2025-10-07 19:35:18] -rwx------ 1 boinc boinc     36292 Oct  7 08:42 runpilot2-wrapper.sh
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc       100 Oct  7 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 19:35:18] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 17:54 run_atlas
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc       105 Oct  7 17:54 job.xml
[2025-10-07 19:35:18] -rw-r--r-- 2 boinc boinc    565604 Oct  7 17:54 input.tar.gz
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc      9449 Oct  7 17:54 init_data.xml
[2025-10-07 19:35:18] -rw-r--r-- 2 boinc boinc 216814382 Oct  7 17:54 EVNT.46376901._004369.pool.root.1
[2025-10-07 19:35:18] -rw-r--r-- 2 boinc boinc     15120 Oct  7 17:54 start_atlas.sh
[2025-10-07 19:35:18] drwxrwx--x 2 boinc boinc      4096 Oct  7 17:54 shared
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc         0 Oct  7 17:54 boinc_lockfile
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc      2518 Oct  7 17:54 pandaJob.out
[2025-10-07 19:35:18] -rw------- 1 boinc boinc    977512 Oct  7 17:55 agis_schedconf.cvmfs.json
[2025-10-07 19:35:18] -rw------- 1 boinc boinc   1560401 Oct  7 17:55 agis_ddmendpoints.agis.ALL.json
[2025-10-07 19:35:18] drwx------ 4 boinc boinc      4096 Oct  7 17:55 pilot3
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc       529 Oct  7 19:34 boinc_task_state.xml
[2025-10-07 19:35:18] -rw------- 1 boinc boinc 177731080 Oct  7 19:34 HITS.46376905._134664.pool.root.1
[2025-10-07 19:35:18] -rw------- 1 boinc boinc      1021 Oct  7 19:34 memory_monitor_summary.json
[2025-10-07 19:35:18] -rw------- 1 boinc boinc    268911 Oct  7 19:34 log.46376905._134664.job.log.tgz.1
[2025-10-07 19:35:18] -rw------- 1 boinc boinc      7742 Oct  7 19:34 heartbeat.json
[2025-10-07 19:35:18] -rw------- 1 boinc boinc        95 Oct  7 19:35 pilot_heartbeat.json
[2025-10-07 19:35:18] -rw------- 1 boinc boinc      4902 Oct  7 19:35 pilotlog.txt
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc        27 Oct  7 19:35 wrapper_checkpoint.txt
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc      8192 Oct  7 19:35 boinc_mmap_file
[2025-10-07 19:35:18] -rw------- 1 boinc boinc    877036 Oct  7 19:35 log.46376905._134664.job.log.1
[2025-10-07 19:35:18] -rw------- 1 boinc boinc       357 Oct  7 19:35 output.list
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc       620 Oct  7 19:35 runtime_log
[2025-10-07 19:35:18] -rw------- 1 boinc boinc   1167360 Oct  7 19:35 result.tar.gz
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc      8764 Oct  7 19:35 runtime_log.err
[2025-10-07 19:35:18] -rw------- 1 boinc boinc       643 Oct  7 19:35 E8KKDmoCMQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR7WNDmXVmqtn.diag
[2025-10-07 19:35:18] -rw-r--r-- 1 boinc boinc     21906 Oct  7 19:35 stderr.txt
[2025-10-07 19:35:18] HITS file was successfully produced:
[2025-10-07 19:35:18] -rw------- 1 boinc boinc 177731080 Oct  7 19:34 shared/HITS.pool.root.1
[2025-10-07 19:35:18]  *** Contents of shared directory: ***
[2025-10-07 19:35:18] total 387024
[2025-10-07 19:35:18] -rw-r--r-- 2 boinc boinc    565604 Oct  7 17:54 input.tar.gz
[2025-10-07 19:35:18] -rw-r--r-- 2 boinc boinc 216814382 Oct  7 17:54 ATLAS.root_0
[2025-10-07 19:35:18] -rw-r--r-- 2 boinc boinc     15120 Oct  7 17:54 start_atlas.sh
[2025-10-07 19:35:18] -rw------- 1 boinc boinc 177731080 Oct  7 19:34 HITS.pool.root.1
[2025-10-07 19:35:18] -rw------- 1 boinc boinc   1167360 Oct  7 19:35 result.tar.gz
19:35:20 (987498): run_atlas exited; CPU time 22963.974353
19:35:20 (987498): called boinc_finish(0)

</stderr_txt>
]]>

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