Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
14:30:09 (1967482): wrapper (7.7.26015): starting
14:30:09 (1967482): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 14:30:09] Arguments: --nthreads 12
[2025-10-07 14:30:09] Threads: 12
[2025-10-07 14:30:09] Checking for CVMFS
[2025-10-07 14:30:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 14:30:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 14:30:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 14:30:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 14:30:09] 2.13.2.0 193085 6758 55628 151445 1 188 16438951 16777217 872 130560 0 25649838 99.998 223831 1209 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-07 14:30:09] CVMFS is ok
[2025-10-07 14:30:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 14:30:09] Checking for apptainer binary...
[2025-10-07 14:30:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 14:30:09] Running /usr/bin/apptainer --version
[2025-10-07 14:30:09] apptainer version 1.3.0-bp160.1.36
[2025-10-07 14:30:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 14:30:09] boinc-runner
[2025-10-07 14:30:09] apptainer works
[2025-10-07 14:30:09] Set ATHENA_PROC_NUMBER=12
[2025-10-07 14:30:09] Set ATHENA_CORE_NUMBER=12
[2025-10-07 14:30:09] Starting ATLAS job with PandaID=6834571732
[2025-10-07 14:30:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 14:57:28]  *** The last 200 lines of the pilot log: ***
[2025-10-07 14:57:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-07 14:57:28]  replicas=None
[2025-10-07 14:57:28]  scope=mc23_13p6TeV
[2025-10-07 14:57:28]  status=None
[2025-10-07 14:57:28]  status_code=0
[2025-10-07 14:57:28]  storage_token=
[2025-10-07 14:57:28]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6834571732/log.46376905._134560.job.log.tgz.1
[2025-10-07 14:57:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/11/log.46376905._134560.job.log.tgz.1
[2025-10-07 14:57:28]  workdir=None
[2025-10-07 14:57:28] ]
[2025-10-07 14:57:28] 2025-10-07 19:57:03,125 | INFO     | transferring file log.46376905._134560.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6834571732/log.46376905._134560.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-07 14:57:28] 2025-10-07 19:57:03,125 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6834571732/log.46376905._134560.job.log.tgz.1 /var/lib/boinc/slots/1/log.46376905._134560.job
[2025-10-07 14:57:28] 2025-10-07 19:57:03,134 | INFO     | adding to output.list: log.46376905._134560.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/11/log.46376905._134560.job.log.tg
[2025-10-07 14:57:28] 2025-10-07 19:57:03,134 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 14:57:28] 2025-10-07 19:57:03,134 | INFO     | summary of transferred files:
[2025-10-07 14:57:28] 2025-10-07 19:57:03,134 | INFO     |  -- lfn=log.46376905._134560.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 14:57:28] 2025-10-07 19:57:03,134 | INFO     | stage-out finished correctly
[2025-10-07 14:57:28] 2025-10-07 19:57:04,805 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 14:57:28] 2025-10-07 19:57:04,943 | INFO     | time since job start (1609s) is within the limit (172800.0s)
[2025-10-07 14:57:28] 2025-10-07 19:57:05,246 | WARNING  | process 1978223 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 14:57:28] 2025-10-07 19:57:05,246 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6834571732/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 14:57:28] 2025-10-07 19:57:05,286 | INFO     | number of running child processes to parent process 1978223: 1
[2025-10-07 14:57:28] 2025-10-07 19:57:05,286 | INFO     | maximum number of monitored processes: 6
[2025-10-07 14:57:28] 2025-10-07 19:57:06,948 | INFO     | time since job start (1611s) is within the limit (172800.0s)
[2025-10-07 14:57:28] 2025-10-07 19:57:07,665 | INFO     | job 6834571732 has state=finished
[2025-10-07 14:57:28] 2025-10-07 19:57:07,666 | INFO     | preparing for final server update for job 6834571732 in state='finished'
[2025-10-07 14:57:28] 2025-10-07 19:57:07,666 | INFO     | this job has now completed (state=finished)
[2025-10-07 14:57:28] 2025-10-07 19:57:07,666 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 14:57:28] 2025-10-07 19:57:07,666 | INFO     | log transfer has been attempted: DONE
[2025-10-07 14:57:28] 2025-10-07 19:57:07,666 | INFO     | job 6834571732 has finished - writing final server update
[2025-10-07 14:57:28] 2025-10-07 19:57:07,666 | INFO     | total number of processed events: 400 (read)
[2025-10-07 14:57:28] 2025-10-07 19:57:07,667 | INFO     | executing command: lscpu
[2025-10-07 14:57:28] 2025-10-07 19:57:07,680 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 14:57:28] 2025-10-07 19:57:07,788 | INFO     | monitor loop #126: job 0:6834571732 is in state 'finished'
[2025-10-07 14:57:28] 2025-10-07 19:57:07,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 14:57:28] 2025-10-07 19:57:08,954 | INFO     | time since job start (1613s) is within the limit (172800.0s)
[2025-10-07 14:57:28] 2025-10-07 19:57:09,041 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 14:57:28] 2025-10-07 19:57:09,044 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3725.81003125
[2025-10-07 14:57:28] 2025-10-07 19:57:09,046 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6834571732/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 14:57:28] 2025-10-07 19:57:09,046 | INFO     | extracted standard info from prmon json
[2025-10-07 14:57:28] 2025-10-07 19:57:09,046 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 14:57:28] 2025-10-07 19:57:09,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 14:57:28] 2025-10-07 19:57:09,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 14:57:28] 2025-10-07 19:57:09,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 14:57:28] 2025-10-07 19:57:09,046 | INFO     | fitting pss+swap vs Time
[2025-10-07 14:57:28] 2025-10-07 19:57:09,046 | INFO     | sum of square deviations: 2474465.0
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | sum of deviations: 63728225.0
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | mean x: 1759866316.5
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | mean y: 2921401.7
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | -- intersect: -45321282653.654686
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | intersect: -45321282653.654686
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | chi2: 0.00010241928035946126
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | -- intersect: -45321282653.654686
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | current memory leak: 25.75 B/s (using 20 data points, chi2=0.00)
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | could have reported an average CPU frequency of 3844 MHz (4 samples)
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | ..............................
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | . Timing measurements:
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | . get job = 0 s
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | . initial setup = 2 s
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | . payload setup = 2 s
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | . stage-in = 0 s
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | . payload execution = 1589 s
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | . stage-out = 0 s
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | . log creation = 0 s
[2025-10-07 14:57:28] 2025-10-07 19:57:09,047 | INFO     | ..............................
[2025-10-07 14:57:28] 2025-10-07 19:57:09,072 | INFO     | 
[2025-10-07 14:57:28] 2025-10-07 19:57:09,072 | INFO     | job summary report
[2025-10-07 14:57:28] 2025-10-07 19:57:09,072 | INFO     | --------------------------------------------------
[2025-10-07 14:57:28] 2025-10-07 19:57:09,072 | INFO     | PanDA job id: 6834571732
[2025-10-07 14:57:28] 2025-10-07 19:57:09,072 | INFO     | task id: 46376905
[2025-10-07 14:57:28] 2025-10-07 19:57:09,072 | INFO     | errors: (none)
[2025-10-07 14:57:28] 2025-10-07 19:57:09,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | pilot state: finished 
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | transexitcode: 0
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | exeerrorcode: 0
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | exeerrordiag: 
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | exitcode: 0
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | exitmsg: OK
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | cpuconsumptiontime: 17161 s
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | nevents: 400
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | neventsw: 0
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | pid: 1978223
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | pgrp: 1978223
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | corecount: 12
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | event service: False
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | sizes: {0: 2348769, 2: 2349031, 11: 2349059, 1595: 2373895, 1596: 2382893, 1598: 2382949, 1602: 2383271}
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | --------------------------------------------------
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | 
[2025-10-07 14:57:28] 2025-10-07 19:57:09,073 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-07 14:57:28] 2025-10-07 19:57:09,086 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,086 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,086 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | job 6834571732 has completed (purged errors)
[2025-10-07 14:57:28] 2025-10-07 19:57:09,087 | INFO     | overall cleanup function is called
[2025-10-07 14:57:28] 2025-10-07 19:57:10,095 | INFO     | --- collectZombieJob: --- 10, [1978223]
[2025-10-07 14:57:28] 2025-10-07 19:57:10,095 | INFO     | zombie collector waiting for pid 1978223
[2025-10-07 14:57:28] 2025-10-07 19:57:10,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 14:57:28] 2025-10-07 19:57:10,095 | INFO     | collected zombie processes
[2025-10-07 14:57:28] 2025-10-07 19:57:10,095 | INFO     | will attempt to kill all subprocesses of pid=1978223
[2025-10-07 14:57:28] 2025-10-07 19:57:10,139 | INFO     | process IDs to be killed: [1978223] (in reverse order)
[2025-10-07 14:57:28] 2025-10-07 19:57:10,170 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 14:57:28] 2025-10-07 19:57:10,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 14:57:28] 2025-10-07 19:57:10,174 | INFO     | did not find any defunct processes belonging to 1978223
[2025-10-07 14:57:28] 2025-10-07 19:57:10,178 | INFO     | did not find any defunct processes belonging to 1978223
[2025-10-07 14:57:28] 2025-10-07 19:57:10,178 | INFO     | ready for new job
[2025-10-07 14:57:28] 2025-10-07 19:57:10,178 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 14:57:28] 2025-10-07 19:57:10,180 | INFO     | ***************************************
[2025-10-07 14:57:28] 2025-10-07 19:57:10,180 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 14:57:28] 2025-10-07 19:57:10,180 | INFO     | ***************************************
[2025-10-07 14:57:28] 2025-10-07 19:57:10,180 | INFO     | 
[2025-10-07 14:57:28] 2025-10-07 19:57:10,181 | INFO     | architecture information:
[2025-10-07 14:57:28] 2025-10-07 19:57:10,181 | INFO     | executing command: cat /etc/os-release
[2025-10-07 14:57:28] 2025-10-07 19:57:10,190 | INFO     | cat /etc/os-release:
[2025-10-07 14:57:28] NAME="CentOS Linux"
[2025-10-07 14:57:28] VERSION="7 (Core)"
[2025-10-07 14:57:28] ID="centos"
[2025-10-07 14:57:28] ID_LIKE="rhel fedora"
[2025-10-07 14:57:28] VERSION_ID="7"
[2025-10-07 14:57:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 14:57:28] ANSI_COLOR="0;31"
[2025-10-07 14:57:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 14:57:28] HOME_URL="https://www.centos.org/"
[2025-10-07 14:57:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 14:57:28] 
[2025-10-07 14:57:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 14:57:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 14:57:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 14:57:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 14:57:28] 
[2025-10-07 14:57:28] 2025-10-07 19:57:10,190 | INFO     | ***************************************
[2025-10-07 14:57:28] 2025-10-07 19:57:10,693 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-07 14:57:28] 2025-10-07 19:57:10,701 | INFO     | sufficient remaining disk space (3850655236096 B)
[2025-10-07 14:57:28] 2025-10-07 19:57:10,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 14:57:28] 2025-10-07 19:57:10,701 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 14:57:28] 2025-10-07 19:57:10,701 | INFO     | update_server=False
[2025-10-07 14:57:28] 2025-10-07 19:57:10,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 14:57:28] 2025-10-07 19:57:10,701 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-07 14:57:28] 2025-10-07 19:57:10,701 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 14:57:28] 2025-10-07 19:57:10,702 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 14:57:28] 2025-10-07 19:57:10,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 14:57:28] 2025-10-07 19:57:10,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 14:57:28] 2025-10-07 19:57:10,822 | INFO     | all job control threads have been joined
[2025-10-07 14:57:28] 2025-10-07 19:57:10,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 14:57:28] 2025-10-07 19:57:11,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 14:57:28] 2025-10-07 19:57:11,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 14:57:28] 2025-10-07 19:57:11,297 | INFO     | aborting loop
[2025-10-07 14:57:28] 2025-10-07 19:57:11,441 | INFO     | all data control threads have been joined
[2025-10-07 14:57:28] 2025-10-07 19:57:11,706 | INFO     | [job] retrieve thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:11,707 | INFO     | [job] queue monitor thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:11,726 | INFO     | all payload control threads have been joined
[2025-10-07 14:57:28] 2025-10-07 19:57:11,784 | INFO     | [payload] failed_post thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:11,828 | INFO     | [job] control thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:11,850 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:12,302 | INFO     | [job] job monitor thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:12,446 | INFO     | [data] control thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:12,477 | INFO     | [payload] validate_post thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:12,732 | INFO     | [payload] control thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:12,781 | INFO     | [data] copytool_in thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:12,812 | INFO     | [job] validate thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:12,873 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:12,909 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:13,174 | INFO     | [data] copytool_out thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:14,837 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:17,533 | INFO     | [monitor] cgroup control has ended
[2025-10-07 14:57:28] 2025-10-07 19:57:21,539 | INFO     | job.realtimelogging is not enabled
[2025-10-07 14:57:28] 2025-10-07 19:57:22,544 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 14:57:28] 2025-10-07 19:57:23,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139734293481280)>', '<ExcThread(monitor, started 139733623609088)>']
[2025-10-07 14:57:28] 2025-10-07 19:57:23,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 14:57:28] 2025-10-07 19:57:23,768 | INFO     | [monitor] control thread has ended
[2025-10-07 14:57:28] 2025-10-07 19:57:28,784 | INFO     | all workflow threads have been joined
[2025-10-07 14:57:28] 2025-10-07 19:57:28,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 14:57:28] 2025-10-07 19:57:28,784 | INFO     | traces error code: 0
[2025-10-07 14:57:28] 2025-10-07 19:57:28,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 14:57:28] 2025-10-07 19:57:28,859 [wrapper] ==== pilot stdout END ====
[2025-10-07 14:57:28] 2025-10-07 19:57:28,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 14:57:28] 2025-10-07 19:57:28,861 [wrapper] pilotpid: 1971356
[2025-10-07 14:57:28] 2025-10-07 19:57:28,862 [wrapper] Pilot exit status: 0
[2025-10-07 14:57:28] 2025-10-07 19:57:28,866 [wrapper] pandaids: 6834571732
[2025-10-07 14:57:28] 2025-10-07 19:57:28,883 [wrapper] cleanup supervisor_pilot 1996010 1971357
[2025-10-07 14:57:28] 2025-10-07 19:57:28,885 [wrapper] Test setup, not cleaning
[2025-10-07 14:57:28] 2025-10-07 19:57:28,886 [wrapper] apfmon messages muted
[2025-10-07 14:57:28] 2025-10-07 19:57:28,887 [wrapper] ==== wrapper stdout END ====
[2025-10-07 14:57:28] 2025-10-07 19:57:28,888 [wrapper] ==== wrapper stderr END ====
[2025-10-07 14:57:28]  *** Error codes and diagnostics ***
[2025-10-07 14:57:28]     "exeErrorCode": 0,
[2025-10-07 14:57:28]     "exeErrorDiag": "",
[2025-10-07 14:57:28]     "pilotErrorCode": 0,
[2025-10-07 14:57:28]     "pilotErrorDiag": "",
[2025-10-07 14:57:28]  *** Listing of results directory ***
[2025-10-07 14:57:28] total 396932
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc    552446 Oct  7 06:55 pilot3.tar.gz
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc      5112 Oct  7 07:36 queuedata.json
[2025-10-07 14:57:28] -rwx------. 1 boinc boinc     36292 Oct  7 07:37 runpilot2-wrapper.sh
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc       100 Oct  7 14:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 14:57:28] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 14:30 run_atlas
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc       105 Oct  7 14:30 job.xml
[2025-10-07 14:57:28] -rw-r--r--. 2 boinc boinc 215703437 Oct  7 14:30 EVNT.46376901._004249.pool.root.1
[2025-10-07 14:57:28] -rw-r--r--. 2 boinc boinc     15120 Oct  7 14:30 start_atlas.sh
[2025-10-07 14:57:28] drwxrwx--x. 1 boinc boinc        76 Oct  7 14:30 shared
[2025-10-07 14:57:28] -rw-r--r--. 2 boinc boinc    565615 Oct  7 14:30 input.tar.gz
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc     10054 Oct  7 14:30 init_data.xml
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc         0 Oct  7 14:30 boinc_setup_complete
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc         0 Oct  7 14:30 boinc_lockfile
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc      2520 Oct  7 14:30 pandaJob.out
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc    979864 Oct  7 14:30 agis_schedconf.cvmfs.json
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc   1560401 Oct  7 14:30 agis_ddmendpoints.agis.ALL.json
[2025-10-07 14:57:28] drwx------. 1 boinc boinc       368 Oct  7 14:30 pilot3
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc        95 Oct  7 14:56 pilot_heartbeat.json
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc 185625102 Oct  7 14:56 HITS.46376905._134560.pool.root.1
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc       529 Oct  7 14:56 boinc_task_state.xml
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc      1027 Oct  7 14:56 memory_monitor_summary.json
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc    349067 Oct  7 14:57 log.46376905._134560.job.log.tgz.1
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc      7792 Oct  7 14:57 heartbeat.json
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc      8192 Oct  7 14:57 boinc_mmap_file
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc        27 Oct  7 14:57 wrapper_checkpoint.txt
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc      4626 Oct  7 14:57 pilotlog.txt
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc    275329 Oct  7 14:57 log.46376905._134560.job.log.1
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc       357 Oct  7 14:57 output.list
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc       620 Oct  7 14:57 runtime_log
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc    645120 Oct  7 14:57 result.tar.gz
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc      8727 Oct  7 14:57 runtime_log.err
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc       651 Oct  7 14:57 246KDmk7LQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2gLMDm1ifcUn.diag
[2025-10-07 14:57:28] -rw-r--r--. 1 boinc boinc     21489 Oct  7 14:57 stderr.txt
[2025-10-07 14:57:28] HITS file was successfully produced:
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc 185625102 Oct  7 14:56 shared/HITS.pool.root.1
[2025-10-07 14:57:28]  *** Contents of shared directory: ***
[2025-10-07 14:57:28] total 393128
[2025-10-07 14:57:28] -rw-r--r--. 2 boinc boinc 215703437 Oct  7 14:30 ATLAS.root_0
[2025-10-07 14:57:28] -rw-r--r--. 2 boinc boinc     15120 Oct  7 14:30 start_atlas.sh
[2025-10-07 14:57:28] -rw-r--r--. 2 boinc boinc    565615 Oct  7 14:30 input.tar.gz
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc 185625102 Oct  7 14:56 HITS.pool.root.1
[2025-10-07 14:57:28] -rw-------. 1 boinc boinc    645120 Oct  7 14:57 result.tar.gz
14:57:30 (1967482): run_atlas exited; CPU time 17157.479781
14:57:30 (1967482): called boinc_finish(0)

</stderr_txt>
]]>

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