Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
14:03:50 (1908235): wrapper (7.7.26015): starting
14:03:50 (1908235): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 14:03:50] Arguments: --nthreads 12
[2025-10-07 14:03:50] Threads: 12
[2025-10-07 14:03:50] Checking for CVMFS
[2025-10-07 14:03:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 14:03:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 14:03:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 14:03:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 14:03:50] 2.13.2.0 193085 6732 55344 151444 3 188 16430315 16777217 916 130560 0 25544980 99.998 222467 1208 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-07 14:03:50] CVMFS is ok
[2025-10-07 14:03:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 14:03:50] Checking for apptainer binary...
[2025-10-07 14:03:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 14:03:50] Running /usr/bin/apptainer --version
[2025-10-07 14:03:50] apptainer version 1.3.0-bp160.1.36
[2025-10-07 14:03:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 14:03:50] boinc-runner
[2025-10-07 14:03:50] apptainer works
[2025-10-07 14:03:50] Set ATHENA_PROC_NUMBER=12
[2025-10-07 14:03:50] Set ATHENA_CORE_NUMBER=12
[2025-10-07 14:03:50] Starting ATLAS job with PandaID=6834414383
[2025-10-07 14:03:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 14:30:04]  *** The last 200 lines of the pilot log: ***
[2025-10-07 14:30:04]  protocol_id=None
[2025-10-07 14:30:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-07 14:30:04]  replicas=None
[2025-10-07 14:30:04]  scope=mc23_13p6TeV
[2025-10-07 14:30:04]  status=None
[2025-10-07 14:30:04]  status_code=0
[2025-10-07 14:30:04]  storage_token=
[2025-10-07 14:30:04]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6834414383/log.46376905._134355.job.log.tgz.1
[2025-10-07 14:30:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/0a/log.46376905._134355.job.log.tgz.1
[2025-10-07 14:30:04]  workdir=None
[2025-10-07 14:30:04] ]
[2025-10-07 14:30:04] 2025-10-07 19:29:15,369 | INFO     | transferring file log.46376905._134355.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6834414383/log.46376905._134355.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-07 14:30:04] 2025-10-07 19:29:15,370 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6834414383/log.46376905._134355.job.log.tgz.1 /var/lib/boinc/slots/1/log.46376905._134355.job
[2025-10-07 14:30:04] 2025-10-07 19:29:15,379 | INFO     | adding to output.list: log.46376905._134355.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/0a/log.46376905._134355.job.log.tg
[2025-10-07 14:30:04] 2025-10-07 19:29:15,379 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 14:30:04] 2025-10-07 19:29:15,379 | INFO     | summary of transferred files:
[2025-10-07 14:30:04] 2025-10-07 19:29:15,380 | INFO     |  -- lfn=log.46376905._134355.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 14:30:04] 2025-10-07 19:29:15,380 | INFO     | stage-out finished correctly
[2025-10-07 14:30:04] 2025-10-07 19:29:15,481 | INFO     | monitor loop #119: job 0:6834414383 is in state 'finished'
[2025-10-07 14:30:04] 2025-10-07 19:29:15,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 14:30:04] 2025-10-07 19:29:15,678 | INFO     | time since job start (1518s) is within the limit (172800.0s)
[2025-10-07 14:30:04] 2025-10-07 19:29:16,426 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 14:30:04] 2025-10-07 19:29:17,193 | INFO     | job 6834414383 has state=finished
[2025-10-07 14:30:04] 2025-10-07 19:29:17,193 | INFO     | preparing for final server update for job 6834414383 in state='finished'
[2025-10-07 14:30:04] 2025-10-07 19:29:17,609 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-07 14:30:04] 2025-10-07 19:29:17,609 | INFO     | this job has now completed (state=finished)
[2025-10-07 14:30:04] 2025-10-07 19:29:17,609 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 14:30:04] 2025-10-07 19:29:17,609 | INFO     | log transfer has been attempted: DONE
[2025-10-07 14:30:04] 2025-10-07 19:29:17,609 | INFO     | job 6834414383 has finished - writing final server update
[2025-10-07 14:30:04] 2025-10-07 19:29:17,609 | INFO     | total number of processed events: 400 (read)
[2025-10-07 14:30:04] 2025-10-07 19:29:17,609 | INFO     | executing command: lscpu
[2025-10-07 14:30:04] 2025-10-07 19:29:17,622 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 14:30:04] 2025-10-07 19:29:17,684 | INFO     | time since job start (1520s) is within the limit (172800.0s)
[2025-10-07 14:30:04] 2025-10-07 19:29:17,983 | INFO     | monitor loop #120: job 0:6834414383 is in state 'finished'
[2025-10-07 14:30:04] 2025-10-07 19:29:17,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 14:30:04] 2025-10-07 19:29:19,040 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 14:30:04] 2025-10-07 19:29:19,042 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3587.479312499999
[2025-10-07 14:30:04] 2025-10-07 19:29:19,044 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6834414383/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | extracted standard info from prmon json
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | fitting pss+swap vs Time
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | sum of square deviations: 1802824.5
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | sum of deviations: -390438674.0
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | mean x: 1759864677.5
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | mean y: 2782129.777777778
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | -- intersect: 381137624208.15955
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | intersect: 381137624208.15955
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | chi2: 0.010829092114664695
[2025-10-07 14:30:04] 2025-10-07 19:29:19,045 | INFO     | -- intersect: 381137624208.15955
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | current memory leak: -216.57 B/s (using 18 data points, chi2=0.01)
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | could have reported an average CPU frequency of 3966 MHz (4 samples)
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | ..............................
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | . Timing measurements:
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | . get job = 0 s
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | . initial setup = 2 s
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | . payload setup = 2 s
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | . stage-in = 0 s
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | . payload execution = 1499 s
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | . stage-out = 0 s
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | . log creation = 0 s
[2025-10-07 14:30:04] 2025-10-07 19:29:19,046 | INFO     | ..............................
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | 
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | job summary report
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | --------------------------------------------------
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | PanDA job id: 6834414383
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | task id: 46376905
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | errors: (none)
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | pilot state: finished 
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | transexitcode: 0
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | exeerrorcode: 0
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | exeerrordiag: 
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | exitcode: 0
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | exitmsg: OK
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | cpuconsumptiontime: 16231 s
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | nevents: 400
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | neventsw: 0
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | pid: 1918980
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | pgrp: 1918980
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | corecount: 12
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | event service: False
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | sizes: {0: 2348766, 2: 2349028, 11: 2349056, 1506: 2382864, 1507: 2382864, 1510: 2383058}
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | --------------------------------------------------
[2025-10-07 14:30:04] 2025-10-07 19:29:19,075 | INFO     | 
[2025-10-07 14:30:04] 2025-10-07 19:29:19,076 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-07 14:30:04] 2025-10-07 19:29:19,086 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | job 6834414383 has completed (purged errors)
[2025-10-07 14:30:04] 2025-10-07 19:29:19,087 | INFO     | overall cleanup function is called
[2025-10-07 14:30:04] 2025-10-07 19:29:20,095 | INFO     | --- collectZombieJob: --- 10, [1918980]
[2025-10-07 14:30:04] 2025-10-07 19:29:20,095 | INFO     | zombie collector waiting for pid 1918980
[2025-10-07 14:30:04] 2025-10-07 19:29:20,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 14:30:04] 2025-10-07 19:29:20,095 | INFO     | collected zombie processes
[2025-10-07 14:30:04] 2025-10-07 19:29:20,095 | INFO     | will attempt to kill all subprocesses of pid=1918980
[2025-10-07 14:30:04] 2025-10-07 19:29:20,137 | INFO     | process IDs to be killed: [1918980] (in reverse order)
[2025-10-07 14:30:04] 2025-10-07 19:29:20,160 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 14:30:04] 2025-10-07 19:29:20,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 14:30:04] 2025-10-07 19:29:20,163 | INFO     | did not find any defunct processes belonging to 1918980
[2025-10-07 14:30:04] 2025-10-07 19:29:20,164 | INFO     | did not find any defunct processes belonging to 1918980
[2025-10-07 14:30:04] 2025-10-07 19:29:20,165 | INFO     | ready for new job
[2025-10-07 14:30:04] 2025-10-07 19:29:20,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 14:30:04] 2025-10-07 19:29:20,166 | INFO     | ***************************************
[2025-10-07 14:30:04] 2025-10-07 19:29:20,166 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 14:30:04] 2025-10-07 19:29:20,166 | INFO     | ***************************************
[2025-10-07 14:30:04] 2025-10-07 19:29:20,166 | INFO     | 
[2025-10-07 14:30:04] 2025-10-07 19:29:20,166 | INFO     | architecture information:
[2025-10-07 14:30:04] 2025-10-07 19:29:20,167 | INFO     | executing command: cat /etc/os-release
[2025-10-07 14:30:04] 2025-10-07 19:29:20,172 | INFO     | cat /etc/os-release:
[2025-10-07 14:30:04] NAME="CentOS Linux"
[2025-10-07 14:30:04] VERSION="7 (Core)"
[2025-10-07 14:30:04] ID="centos"
[2025-10-07 14:30:04] ID_LIKE="rhel fedora"
[2025-10-07 14:30:04] VERSION_ID="7"
[2025-10-07 14:30:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 14:30:04] ANSI_COLOR="0;31"
[2025-10-07 14:30:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 14:30:04] HOME_URL="https://www.centos.org/"
[2025-10-07 14:30:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 14:30:04] 
[2025-10-07 14:30:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 14:30:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 14:30:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 14:30:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 14:30:04] 
[2025-10-07 14:30:04] 2025-10-07 19:29:20,173 | INFO     | ***************************************
[2025-10-07 14:30:04] 2025-10-07 19:29:20,675 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-07 14:30:04] 2025-10-07 19:29:20,681 | INFO     | sufficient remaining disk space (3849764995072 B)
[2025-10-07 14:30:04] 2025-10-07 19:29:20,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 14:30:04] 2025-10-07 19:29:20,681 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 14:30:04] 2025-10-07 19:29:20,681 | INFO     | update_server=False
[2025-10-07 14:30:04] 2025-10-07 19:29:20,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 14:30:04] 2025-10-07 19:29:20,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 14:30:04] 2025-10-07 19:29:20,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 14:30:04] 2025-10-07 19:29:21,320 | INFO     | all data control threads have been joined
[2025-10-07 14:30:04] 2025-10-07 19:29:21,373 | INFO     | all payload control threads have been joined
[2025-10-07 14:30:04] 2025-10-07 19:29:21,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 14:30:04] 2025-10-07 19:29:21,491 | INFO     | aborting loop
[2025-10-07 14:30:04] 2025-10-07 19:29:21,687 | INFO     | [job] retrieve thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:21,687 | INFO     | [job] queue monitor thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:21,781 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:21,935 | INFO     | [data] copytool_in thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:21,994 | INFO     | [payload] failed_post thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:22,012 | INFO     | all job control threads have been joined
[2025-10-07 14:30:04] 2025-10-07 19:29:22,326 | INFO     | [data] control thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:22,378 | INFO     | [payload] control thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:22,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 14:30:04] 2025-10-07 19:29:22,496 | INFO     | [job] job monitor thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:22,509 | INFO     | [payload] validate_post thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:22,808 | INFO     | [job] validate thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:22,890 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:22,917 | INFO     | [data] copytool_out thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:22,955 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:23,017 | INFO     | [job] control thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:26,460 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:31,592 | INFO     | job.realtimelogging is not enabled
[2025-10-07 14:30:04] 2025-10-07 19:29:32,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 14:30:04] 2025-10-07 19:29:50,802 | INFO     | PID=1912122 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 14:30:04] 2025-10-07 19:29:50,802 | INFO     | .. there are 2 such processes running
[2025-10-07 14:30:04] 2025-10-07 19:29:50,802 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 14:30:04] 2025-10-07 19:29:50,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 14:30:04] 2025-10-07 19:29:50,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 14:30:04] 2025-10-07 19:29:58,743 | INFO     | [monitor] cgroup control has ended
[2025-10-07 14:30:04] 2025-10-07 19:29:59,448 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962074081088)>', '<ExcThread(monitor, started 139961298839296)>']
[2025-10-07 14:30:04] 2025-10-07 19:29:59,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 14:30:04] 2025-10-07 19:29:59,846 | INFO     | [monitor] control thread has ended
[2025-10-07 14:30:04] 2025-10-07 19:30:04,474 | INFO     | all workflow threads have been joined
[2025-10-07 14:30:04] 2025-10-07 19:30:04,474 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 14:30:04] 2025-10-07 19:30:04,474 | INFO     | traces error code: 0
[2025-10-07 14:30:04] 2025-10-07 19:30:04,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 14:30:04] 2025-10-07 19:30:04,725 [wrapper] ==== pilot stdout END ====
[2025-10-07 14:30:04] 2025-10-07 19:30:04,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 14:30:04] 2025-10-07 19:30:04,733 [wrapper] pilotpid: 1912122
[2025-10-07 14:30:04] 2025-10-07 19:30:04,737 [wrapper] Pilot exit status: 0
[2025-10-07 14:30:04] 2025-10-07 19:30:04,749 [wrapper] pandaids: 6834414383
[2025-10-07 14:30:04] 2025-10-07 19:30:04,777 [wrapper] cleanup supervisor_pilot 1936763 1912123
[2025-10-07 14:30:04] 2025-10-07 19:30:04,778 [wrapper] Test setup, not cleaning
[2025-10-07 14:30:04] 2025-10-07 19:30:04,779 [wrapper] apfmon messages muted
[2025-10-07 14:30:04] 2025-10-07 19:30:04,780 [wrapper] ==== wrapper stdout END ====
[2025-10-07 14:30:04] 2025-10-07 19:30:04,781 [wrapper] ==== wrapper stderr END ====
[2025-10-07 14:30:04]  *** Error codes and diagnostics ***
[2025-10-07 14:30:04]     "exeErrorCode": 0,
[2025-10-07 14:30:04]     "exeErrorDiag": "",
[2025-10-07 14:30:04]     "pilotErrorCode": 0,
[2025-10-07 14:30:04]     "pilotErrorDiag": "",
[2025-10-07 14:30:04]  *** Listing of results directory ***
[2025-10-07 14:30:04] total 387156
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc    552446 Oct  7 06:55 pilot3.tar.gz
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc      5112 Oct  7 07:24 queuedata.json
[2025-10-07 14:30:04] -rwx------. 1 boinc boinc     36292 Oct  7 07:25 runpilot2-wrapper.sh
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc       100 Oct  7 14:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 14:30:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 14:03 run_atlas
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc       105 Oct  7 14:03 job.xml
[2025-10-07 14:30:04] -rw-r--r--. 2 boinc boinc 213824088 Oct  7 14:03 EVNT.46376901._003762.pool.root.1
[2025-10-07 14:30:04] -rw-r--r--. 2 boinc boinc     15120 Oct  7 14:03 start_atlas.sh
[2025-10-07 14:30:04] drwxrwx--x. 1 boinc boinc        76 Oct  7 14:03 shared
[2025-10-07 14:30:04] -rw-r--r--. 2 boinc boinc    565607 Oct  7 14:03 input.tar.gz
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc     10054 Oct  7 14:03 init_data.xml
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc         0 Oct  7 14:03 boinc_setup_complete
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc         0 Oct  7 14:03 boinc_lockfile
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc      2519 Oct  7 14:03 pandaJob.out
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc    977512 Oct  7 14:03 agis_schedconf.cvmfs.json
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc   1560401 Oct  7 14:03 agis_ddmendpoints.agis.ALL.json
[2025-10-07 14:30:04] drwx------. 1 boinc boinc       368 Oct  7 14:03 pilot3
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc 177554821 Oct  7 14:28 HITS.46376905._134355.pool.root.1
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc        95 Oct  7 14:29 pilot_heartbeat.json
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc      1027 Oct  7 14:29 memory_monitor_summary.json
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc    332071 Oct  7 14:29 log.46376905._134355.job.log.tgz.1
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc       529 Oct  7 14:29 boinc_task_state.xml
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc      7795 Oct  7 14:29 heartbeat.json
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc        27 Oct  7 14:30 wrapper_checkpoint.txt
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc      8192 Oct  7 14:30 boinc_mmap_file
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc      4897 Oct  7 14:30 pilotlog.txt
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc    262687 Oct  7 14:30 log.46376905._134355.job.log.1
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc       357 Oct  7 14:30 output.list
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc       620 Oct  7 14:30 runtime_log
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc    614400 Oct  7 14:30 result.tar.gz
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc      8727 Oct  7 14:30 runtime_log.err
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc       652 Oct  7 14:30 EtALDmnvLQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ3WNDm5ZDvIn.diag
[2025-10-07 14:30:04] -rw-r--r--. 1 boinc boinc     21438 Oct  7 14:30 stderr.txt
[2025-10-07 14:30:04] HITS file was successfully produced:
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc 177554821 Oct  7 14:28 shared/HITS.pool.root.1
[2025-10-07 14:30:04]  *** Contents of shared directory: ***
[2025-10-07 14:30:04] total 383384
[2025-10-07 14:30:04] -rw-r--r--. 2 boinc boinc 213824088 Oct  7 14:03 ATLAS.root_0
[2025-10-07 14:30:04] -rw-r--r--. 2 boinc boinc     15120 Oct  7 14:03 start_atlas.sh
[2025-10-07 14:30:04] -rw-r--r--. 2 boinc boinc    565607 Oct  7 14:03 input.tar.gz
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc 177554821 Oct  7 14:28 HITS.pool.root.1
[2025-10-07 14:30:04] -rw-------. 1 boinc boinc    614400 Oct  7 14:30 result.tar.gz
14:30:06 (1908235): run_atlas exited; CPU time 16233.054340
14:30:06 (1908235): called boinc_finish(0)

</stderr_txt>
]]>

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