Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:23:19 (5174): wrapper (7.7.26015): starting
02:23:19 (5174): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 02:23:19] Arguments: --nthreads 8
[2025-10-08 02:23:19] Threads: 8
[2025-10-08 02:23:19] Checking for CVMFS
[2025-10-08 02:23:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 02:23:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 02:23:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 02:23:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 02:23:22] 2.11.2.0 23903 12063 81312 151452 0 60 24007537 25165825 4632 130560 0 4195695 99.973 792696 857 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-08 02:23:22] CVMFS is ok
[2025-10-08 02:23:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 02:23:22] Checking for apptainer binary...
[2025-10-08 02:23:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 02:23:22] Running /usr/bin/apptainer --version
[2025-10-08 02:23:22] apptainer version 1.3.2-1.el7
[2025-10-08 02:23:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 02:23:44] cg-vwn444.simple-grid.lan
[2025-10-08 02:23:44] apptainer works
[2025-10-08 02:23:44] Set ATHENA_PROC_NUMBER=8
[2025-10-08 02:23:44] Set ATHENA_CORE_NUMBER=8
[2025-10-08 02:23:44] Starting ATLAS job with PandaID=6833169385
[2025-10-08 02:23:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 06:17:38]  *** The last 200 lines of the pilot log: ***
[2025-10-08 06:17:38] 2025-10-08 04:16:38,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 06:17:38] 2025-10-08 04:16:38,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 06:17:38] 2025-10-08 04:16:38,028 | INFO     | fitting pss+swap vs Time
[2025-10-08 06:17:38] 2025-10-08 04:16:38,029 | INFO     | sum of square deviations: 3168461268.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,030 | INFO     | sum of deviations: 46538762818.000015
[2025-10-08 06:17:38] 2025-10-08 04:16:38,031 | INFO     | mean x: 1759890302.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,031 | INFO     | mean y: 2456802.875576037
[2025-10-08 06:17:38] 2025-10-08 04:16:38,031 | INFO     | -- intersect: -25847036191.61364
[2025-10-08 06:17:38] 2025-10-08 04:16:38,031 | INFO     | intersect: -25847036191.61364
[2025-10-08 06:17:38] 2025-10-08 04:16:38,031 | INFO     | chi2: 6.184983104192417
[2025-10-08 06:17:38] 2025-10-08 04:16:38,032 | INFO     | sum of square deviations: 2954447953.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,034 | INFO     | sum of deviations: 59830010849.99999
[2025-10-08 06:17:38] 2025-10-08 04:16:38,034 | INFO     | mean x: 1759890149.5
[2025-10-08 06:17:38] 2025-10-08 04:16:38,034 | INFO     | mean y: 2466083.0943396227
[2025-10-08 06:17:38] 2025-10-08 04:16:38,034 | INFO     | -- intersect: -35636762772.66378
[2025-10-08 06:17:38] 2025-10-08 04:16:38,034 | INFO     | intersect: -35636762772.66378
[2025-10-08 06:17:38] 2025-10-08 04:16:38,035 | INFO     | chi2: 5.476705511770311
[2025-10-08 06:17:38] 2025-10-08 04:16:38,035 | INFO     | current chi2=5.476705511770311 (change=11.451568751125745 %)
[2025-10-08 06:17:38] 2025-10-08 04:16:38,035 | INFO     | right removable region: 211
[2025-10-08 06:17:38] 2025-10-08 04:16:38,035 | INFO     | sum of square deviations: 2954447953.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,037 | INFO     | sum of deviations: -26470608125.5
[2025-10-08 06:17:38] 2025-10-08 04:16:38,037 | INFO     | mean x: 1759890454.5
[2025-10-08 06:17:38] 2025-10-08 04:16:38,037 | INFO     | mean y: 2508759.863207547
[2025-10-08 06:17:38] 2025-10-08 04:16:38,037 | INFO     | -- intersect: 15770385299.226154
[2025-10-08 06:17:38] 2025-10-08 04:16:38,038 | INFO     | intersect: 15770385299.226154
[2025-10-08 06:17:38] 2025-10-08 04:16:38,038 | INFO     | chi2: 1.6792715915255
[2025-10-08 06:17:38] 2025-10-08 04:16:38,038 | INFO     | current chi2=1.6792715915255 (change=72.84921295278517 %)
[2025-10-08 06:17:38] 2025-10-08 04:16:38,039 | INFO     | sum of square deviations: 2750295288.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,040 | INFO     | sum of deviations: -49987385678.99997
[2025-10-08 06:17:38] 2025-10-08 04:16:38,040 | INFO     | mean x: 1759890607.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,041 | INFO     | mean y: 2526160.0289855073
[2025-10-08 06:17:38] 2025-10-08 04:16:38,041 | INFO     | -- intersect: 31989029903.389343
[2025-10-08 06:17:38] 2025-10-08 04:16:38,041 | INFO     | intersect: 31989029903.389343
[2025-10-08 06:17:38] 2025-10-08 04:16:38,041 | INFO     | chi2: 0.9719017911991609
[2025-10-08 06:17:38] 2025-10-08 04:16:38,041 | INFO     | current chi2=0.9719017911991609 (change=42.123609063364405 %)
[2025-10-08 06:17:38] 2025-10-08 04:16:38,042 | INFO     | sum of square deviations: 2555770710.5
[2025-10-08 06:17:38] 2025-10-08 04:16:38,043 | INFO     | sum of deviations: -46870821137.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,044 | INFO     | mean x: 1759890759.5
[2025-10-08 06:17:38] 2025-10-08 04:16:38,044 | INFO     | mean y: 2523681.405940594
[2025-10-08 06:17:38] 2025-10-08 04:16:38,044 | INFO     | -- intersect: 32277533591.448334
[2025-10-08 06:17:38] 2025-10-08 04:16:38,044 | INFO     | intersect: 32277533591.448334
[2025-10-08 06:17:38] 2025-10-08 04:16:38,044 | INFO     | chi2: 0.9624963842966244
[2025-10-08 06:17:38] 2025-10-08 04:16:38,044 | INFO     | current chi2=0.9624963842966244 (change=0.9677322325882097 %)
[2025-10-08 06:17:38] 2025-10-08 04:16:38,045 | INFO     | left removable region: 30
[2025-10-08 06:17:38] 2025-10-08 04:16:38,045 | INFO     | sum of square deviations: 1838657730.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,046 | INFO     | sum of deviations: -12289640903.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,046 | INFO     | mean x: 1759891034.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,047 | INFO     | mean y: 2517033.0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,047 | INFO     | -- intersect: 11765679085.06358
[2025-10-08 06:17:38] 2025-10-08 04:16:38,047 | INFO     | intersect: 11765679085.06358
[2025-10-08 06:17:38] 2025-10-08 04:16:38,047 | INFO     | chi2: 0.11123190787852455
[2025-10-08 06:17:38] 2025-10-08 04:16:38,047 | INFO     | -- intersect: 11765679085.06358
[2025-10-08 06:17:38] 2025-10-08 04:16:38,048 | INFO     | current memory leak: -6.68 B/s (using 181 data points, chi2=0.11)
[2025-10-08 06:17:38] 2025-10-08 04:16:38,048 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-08 06:17:38] 2025-10-08 04:16:38,049 | INFO     | ..............................
[2025-10-08 06:17:38] 2025-10-08 04:16:38,049 | INFO     | . Timing measurements:
[2025-10-08 06:17:38] 2025-10-08 04:16:38,049 | INFO     | . get job = 0 s
[2025-10-08 06:17:38] 2025-10-08 04:16:38,049 | INFO     | . initial setup = 3 s
[2025-10-08 06:17:38] 2025-10-08 04:16:38,049 | INFO     | . payload setup = 138 s
[2025-10-08 06:17:38] 2025-10-08 04:16:38,049 | INFO     | . stage-in = 0 s
[2025-10-08 06:17:38] 2025-10-08 04:16:38,049 | INFO     | . payload execution = 13366 s
[2025-10-08 06:17:38] 2025-10-08 04:16:38,049 | INFO     | . stage-out = 3 s
[2025-10-08 06:17:38] 2025-10-08 04:16:38,049 | INFO     | . log creation = 0 s
[2025-10-08 06:17:38] 2025-10-08 04:16:38,050 | INFO     | ..............................
[2025-10-08 06:17:38] 2025-10-08 04:16:38,453 | INFO     | 
[2025-10-08 06:17:38] 2025-10-08 04:16:38,453 | INFO     | job summary report
[2025-10-08 06:17:38] 2025-10-08 04:16:38,453 | INFO     | --------------------------------------------------
[2025-10-08 06:17:38] 2025-10-08 04:16:38,453 | INFO     | PanDA job id: 6833169385
[2025-10-08 06:17:38] 2025-10-08 04:16:38,453 | INFO     | task id: 46376905
[2025-10-08 06:17:38] 2025-10-08 04:16:38,453 | INFO     | errors: (none)
[2025-10-08 06:17:38] 2025-10-08 04:16:38,453 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | pilot state: finished 
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | transexitcode: 0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | exeerrorcode: 0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | exeerrordiag: 
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | exitcode: 0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | exitmsg: OK
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | cpuconsumptiontime: 48837 s
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | nevents: 400
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | neventsw: 0
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | pid: 15528
[2025-10-08 06:17:38] 2025-10-08 04:16:38,454 | INFO     | pgrp: 15528
[2025-10-08 06:17:38] 2025-10-08 04:16:38,455 | INFO     | corecount: 8
[2025-10-08 06:17:38] 2025-10-08 04:16:38,455 | INFO     | event service: False
[2025-10-08 06:17:38] 2025-10-08 04:16:38,455 | INFO     | sizes: {0: 2348593, 1: 2348848, 2: 2348848, 12: 2348876, 23: 2348904, 34: 2348932, 45: 2349088, 55: 2349116, 66: 2349144, 77: 2349172, 84: 2349490, 87: 2349798, 13
[2025-10-08 06:17:38] 2025-10-08 04:16:38,455 | INFO     | --------------------------------------------------
[2025-10-08 06:17:38] 2025-10-08 04:16:38,455 | INFO     | 
[2025-10-08 06:17:38] 2025-10-08 04:16:38,455 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-08 06:17:38] 2025-10-08 04:16:38,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,874 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 06:17:38] 2025-10-08 04:16:38,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,875 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 06:17:38] 2025-10-08 04:16:38,875 | INFO     | job 6833169385 has completed (purged errors)
[2025-10-08 06:17:38] 2025-10-08 04:16:38,875 | INFO     | overall cleanup function is called
[2025-10-08 06:17:38] 2025-10-08 04:16:39,886 | INFO     | --- collectZombieJob: --- 10, [15528]
[2025-10-08 06:17:38] 2025-10-08 04:16:39,886 | INFO     | zombie collector waiting for pid 15528
[2025-10-08 06:17:38] 2025-10-08 04:16:39,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 06:17:38] 2025-10-08 04:16:39,886 | INFO     | collected zombie processes
[2025-10-08 06:17:38] 2025-10-08 04:16:39,886 | INFO     | will attempt to kill all subprocesses of pid=15528
[2025-10-08 06:17:38] 2025-10-08 04:16:39,997 | INFO     | process IDs to be killed: [15528] (in reverse order)
[2025-10-08 06:17:38] 2025-10-08 04:16:40,520 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 06:17:38] 2025-10-08 04:16:40,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 06:17:38] 2025-10-08 04:16:40,530 | INFO     | did not find any defunct processes belonging to 15528
[2025-10-08 06:17:38] 2025-10-08 04:16:40,533 | INFO     | did not find any defunct processes belonging to 15528
[2025-10-08 06:17:38] 2025-10-08 04:16:40,534 | INFO     | ready for new job
[2025-10-08 06:17:38] 2025-10-08 04:16:40,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 06:17:38] 2025-10-08 04:16:40,536 | INFO     | ***************************************
[2025-10-08 06:17:38] 2025-10-08 04:16:40,536 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 06:17:38] 2025-10-08 04:16:40,537 | INFO     | ***************************************
[2025-10-08 06:17:38] 2025-10-08 04:16:40,537 | INFO     | 
[2025-10-08 06:17:38] 2025-10-08 04:16:40,537 | INFO     | pilot is running in a VM
[2025-10-08 06:17:38] 2025-10-08 04:16:40,537 | INFO     | architecture information:
[2025-10-08 06:17:38] 2025-10-08 04:16:40,548 | INFO     | executing command: cat /etc/os-release
[2025-10-08 06:17:38] 2025-10-08 04:16:40,740 | INFO     | cat /etc/os-release:
[2025-10-08 06:17:38] NAME="CentOS Linux"
[2025-10-08 06:17:38] VERSION="7 (Core)"
[2025-10-08 06:17:38] ID="centos"
[2025-10-08 06:17:38] ID_LIKE="rhel fedora"
[2025-10-08 06:17:38] VERSION_ID="7"
[2025-10-08 06:17:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 06:17:38] ANSI_COLOR="0;31"
[2025-10-08 06:17:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 06:17:38] HOME_URL="https://www.centos.org/"
[2025-10-08 06:17:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 06:17:38] 
[2025-10-08 06:17:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 06:17:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 06:17:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 06:17:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 06:17:38] 
[2025-10-08 06:17:38] 2025-10-08 04:16:40,741 | INFO     | ***************************************
[2025-10-08 06:17:38] 2025-10-08 04:16:41,244 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-08 06:17:38] 2025-10-08 04:16:41,446 | INFO     | sufficient remaining disk space (496569942016 B)
[2025-10-08 06:17:38] 2025-10-08 04:16:41,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 06:17:38] 2025-10-08 04:16:41,446 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 06:17:38] 2025-10-08 04:16:41,446 | INFO     | update_server=False
[2025-10-08 06:17:38] 2025-10-08 04:16:41,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 06:17:38] 2025-10-08 04:16:41,790 | INFO     | all data control threads have been joined
[2025-10-08 06:17:38] 2025-10-08 04:16:42,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 06:17:38] 2025-10-08 04:16:42,008 | INFO     | aborting loop
[2025-10-08 06:17:38] 2025-10-08 04:16:42,127 | INFO     | all payload control threads have been joined
[2025-10-08 06:17:38] 2025-10-08 04:16:42,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 06:17:38] 2025-10-08 04:16:42,453 | INFO     | [job] retrieve thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:42,709 | INFO     | [job] validate thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:42,727 | INFO     | [payload] failed_post thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:42,796 | INFO     | [data] control thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:42,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:43,014 | INFO     | [job] job monitor thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:43,048 | INFO     | all job control threads have been joined
[2025-10-08 06:17:38] 2025-10-08 04:16:43,133 | INFO     | [payload] control thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:43,148 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:43,195 | INFO     | [data] copytool_in thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:43,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 06:17:38] 2025-10-08 04:16:43,417 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:43,481 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:43,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 06:17:38] 2025-10-08 04:16:43,737 | INFO     | [payload] validate_post thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:44,054 | INFO     | [job] control thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:44,206 | INFO     | [job] queue monitor thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:44,336 | INFO     | [data] copytool_out thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:16:47,529 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 06:17:38] 2025-10-08 04:17:11,035 | INFO     | PID=8979 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-08 06:17:38] 2025-10-08 04:17:11,035 | INFO     | .. there are 9 such processes running
[2025-10-08 06:17:38] 2025-10-08 04:17:11,035 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 06:17:38] 2025-10-08 04:17:11,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 06:17:38] 2025-10-08 04:17:11,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 06:17:38] 2025-10-08 04:17:28,125 | INFO     | [monitor] cgroup control has ended
[2025-10-08 06:17:38] 2025-10-08 04:17:28,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407726462784)>', '<ExcThread(monitor, started 140407262385920)>']
[2025-10-08 06:17:38] 2025-10-08 04:17:29,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 06:17:38] 2025-10-08 04:17:29,142 | INFO     | [monitor] control thread has ended
[2025-10-08 06:17:38] 2025-10-08 04:17:33,674 | INFO     | all workflow threads have been joined
[2025-10-08 06:17:38] 2025-10-08 04:17:33,674 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 06:17:38] 2025-10-08 04:17:33,674 | INFO     | traces error code: 0
[2025-10-08 06:17:38] 2025-10-08 04:17:33,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 06:17:38] 2025-10-08 04:17:34,041 [wrapper] ==== pilot stdout END ====
[2025-10-08 06:17:38] 2025-10-08 04:17:34,156 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 06:17:38] 2025-10-08 04:17:34,253 [wrapper] pilotpid: 8979
[2025-10-08 06:17:38] 2025-10-08 04:17:34,302 [wrapper] Pilot exit status: 0
[2025-10-08 06:17:38] 2025-10-08 04:17:34,784 [wrapper] pandaids: 6833169385
[2025-10-08 06:17:38] 2025-10-08 04:17:35,204 [wrapper] cleanup supervisor_pilot 24490 8980
[2025-10-08 06:17:38] 2025-10-08 04:17:35,277 [wrapper] Test setup, not cleaning
[2025-10-08 06:17:38] 2025-10-08 04:17:35,298 [wrapper] apfmon messages muted
[2025-10-08 06:17:38] 2025-10-08 04:17:35,453 [wrapper] ==== wrapper stdout END ====
[2025-10-08 06:17:38] 2025-10-08 04:17:35,569 [wrapper] ==== wrapper stderr END ====
[2025-10-08 06:17:38]  *** Error codes and diagnostics ***
[2025-10-08 06:17:38]     "exeErrorCode": 0,
[2025-10-08 06:17:38]     "exeErrorDiag": "",
[2025-10-08 06:17:38]     "pilotErrorCode": 0,
[2025-10-08 06:17:38]     "pilotErrorDiag": "",
[2025-10-08 06:17:38]  *** Listing of results directory ***
[2025-10-08 06:17:38] total 390280
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc    552446 Oct  7 07:19 pilot3.tar.gz
[2025-10-08 06:17:38] -rwx------. 1 boinc boinc     36292 Oct  7 07:32 runpilot2-wrapper.sh
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc      5112 Oct  7 07:32 queuedata.json
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc       100 Oct  8 02:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 06:17:38] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 02:23 run_atlas
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc       105 Oct  8 02:23 job.xml
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc      6391 Oct  8 02:23 init_data.xml
[2025-10-08 06:17:38] -rw-r--r--. 2 boinc boinc 213384544 Oct  8 02:23 EVNT.46376901._004792.pool.root.1
[2025-10-08 06:17:38] -rw-r--r--. 2 boinc boinc     15120 Oct  8 02:23 start_atlas.sh
[2025-10-08 06:17:38] drwxrwx--x. 2 boinc boinc        68 Oct  8 02:23 shared
[2025-10-08 06:17:38] -rw-r--r--. 2 boinc boinc    565600 Oct  8 02:23 input.tar.gz
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc         0 Oct  8 02:23 boinc_lockfile
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc      2521 Oct  8 02:23 pandaJob.out
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc    979833 Oct  8 02:27 agis_schedconf.cvmfs.json
[2025-10-08 06:17:38] drwx------. 4 boinc boinc      4096 Oct  8 02:27 pilot3
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc 177814237 Oct  8 06:13 HITS.46376905._128751.pool.root.1
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc       531 Oct  8 06:14 boinc_task_state.xml
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc      1033 Oct  8 06:15 memory_monitor_summary.json
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc   1560401 Oct  8 06:15 agis_ddmendpoints.agis.ALL.json
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc    449286 Oct  8 06:15 log.46376905._128751.job.log.tgz.1
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc        95 Oct  8 06:16 pilot_heartbeat.json
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc      7781 Oct  8 06:16 heartbeat.json
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc        28 Oct  8 06:17 wrapper_checkpoint.txt
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc      8192 Oct  8 06:17 boinc_mmap_file
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc      4883 Oct  8 06:17 pilotlog.txt
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc   1836998 Oct  8 06:17 log.46376905._128751.job.log.1
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc       357 Oct  8 06:17 output.list
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc       620 Oct  8 06:17 runtime_log
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc   2304000 Oct  8 06:17 result.tar.gz
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc       656 Oct  8 06:17 WXiLDmUUFQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDm23KMDmAxseWn.diag
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc      8703 Oct  8 06:17 runtime_log.err
[2025-10-08 06:17:38] -rw-r--r--. 1 boinc boinc     20583 Oct  8 06:17 stderr.txt
[2025-10-08 06:17:38] HITS file was successfully produced:
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc 177814237 Oct  8 06:13 shared/HITS.pool.root.1
[2025-10-08 06:17:38]  *** Contents of shared directory: ***
[2025-10-08 06:17:38] total 384856
[2025-10-08 06:17:38] -rw-r--r--. 2 boinc boinc 213384544 Oct  8 02:23 ATLAS.root_0
[2025-10-08 06:17:38] -rw-r--r--. 2 boinc boinc     15120 Oct  8 02:23 start_atlas.sh
[2025-10-08 06:17:38] -rw-r--r--. 2 boinc boinc    565600 Oct  8 02:23 input.tar.gz
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc 177814237 Oct  8 06:13 HITS.pool.root.1
[2025-10-08 06:17:38] -rw-------. 1 boinc boinc   2304000 Oct  8 06:17 result.tar.gz
06:17:39 (5174): run_atlas exited; CPU time 49024.079753
06:17:39 (5174): called boinc_finish(0)

</stderr_txt>
]]>

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