Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
14:16:18 (1105073): wrapper (7.7.26015): starting
14:16:18 (1105073): wrapper: running run_atlas (--nthreads 5)
[2025-10-07 14:16:18] Arguments: --nthreads 5
[2025-10-07 14:16:18] Threads: 5
[2025-10-07 14:16:18] Checking for CVMFS
[2025-10-07 14:16:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 14:16:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 14:16:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 14:16:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 14:16:18] 2.11.0.0 188412 425 85352 151443 2 188 3478299 4096001 4647 130560 0 2552462 99.998 13547 2586 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 14:16:18] CVMFS is ok
[2025-10-07 14:16:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 14:16:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 14:16:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 14:16:18] Further information can be found at the LHC@home message board.
[2025-10-07 14:16:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 14:16:18] Checking for apptainer binary...
[2025-10-07 14:16:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 14:16:18] Running /usr/bin/apptainer --version
[2025-10-07 14:16:18] apptainer version 1.4.3
[2025-10-07 14:16:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 14:16:19] x32-linux4
[2025-10-07 14:16:19] apptainer works
[2025-10-07 14:16:19] Set ATHENA_PROC_NUMBER=5
[2025-10-07 14:16:19] Set ATHENA_CORE_NUMBER=5
[2025-10-07 14:16:19] Starting ATLAS job with PandaID=6833424031
[2025-10-07 14:16:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 15:59:41]  *** The last 200 lines of the pilot log: ***
[2025-10-07 15:59:41] 2025-10-07 19:58:39,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 15:59:41] 2025-10-07 19:58:39,459 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 15:59:41] 2025-10-07 19:58:39,459 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 15:59:41] 2025-10-07 19:58:39,461 | INFO     | fitting pss+swap vs Time
[2025-10-07 15:59:41] 2025-10-07 19:58:39,461 | INFO     | sum of square deviations: 319447850.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,461 | INFO     | sum of deviations: 3374474067.000001
[2025-10-07 15:59:41] 2025-10-07 19:58:39,461 | INFO     | mean x: 1759864054.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,461 | INFO     | mean y: 2299551.0495049506
[2025-10-07 15:59:41] 2025-10-07 19:58:39,461 | INFO     | -- intersect: -18587951132.022835
[2025-10-07 15:59:41] 2025-10-07 19:58:39,461 | INFO     | intersect: -18587951132.022835
[2025-10-07 15:59:41] 2025-10-07 19:58:39,462 | INFO     | chi2: 1.8855374515299763
[2025-10-07 15:59:41] 2025-10-07 19:58:39,462 | INFO     | sum of square deviations: 274312120.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,462 | INFO     | sum of deviations: 9358534264.499998
[2025-10-07 15:59:41] 2025-10-07 19:58:39,462 | INFO     | mean x: 1759863901.5
[2025-10-07 15:59:41] 2025-10-07 19:58:39,462 | INFO     | mean y: 2318908.3020833335
[2025-10-07 15:59:41] 2025-10-07 19:58:39,462 | INFO     | -- intersect: -60037852204.24081
[2025-10-07 15:59:41] 2025-10-07 19:58:39,462 | INFO     | intersect: -60037852204.24081
[2025-10-07 15:59:41] 2025-10-07 19:58:39,462 | INFO     | chi2: 1.0729700639503597
[2025-10-07 15:59:41] 2025-10-07 19:58:39,463 | INFO     | current chi2=1.0729700639503597 (change=43.09473603509055 %)
[2025-10-07 15:59:41] 2025-10-07 19:58:39,463 | INFO     | sum of square deviations: 233641590.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,463 | INFO     | sum of deviations: 8844755573.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,463 | INFO     | mean x: 1759863749.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,463 | INFO     | mean y: 2316978.681318681
[2025-10-07 15:59:41] 2025-10-07 19:58:39,463 | INFO     | -- intersect: -66619232299.80298
[2025-10-07 15:59:41] 2025-10-07 19:58:39,463 | INFO     | intersect: -66619232299.80298
[2025-10-07 15:59:41] 2025-10-07 19:58:39,463 | INFO     | chi2: 1.074979859039189
[2025-10-07 15:59:41] 2025-10-07 19:58:39,463 | INFO     | current chi2=1.074979859039189 (change=-0.18731138513127718 %)
[2025-10-07 15:59:41] 2025-10-07 19:58:39,464 | INFO     | right removable region: 90
[2025-10-07 15:59:41] 2025-10-07 19:58:39,464 | INFO     | sum of square deviations: 274312120.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,464 | INFO     | sum of deviations: -5145671653.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,464 | INFO     | mean x: 1759864206.5
[2025-10-07 15:59:41] 2025-10-07 19:58:39,464 | INFO     | mean y: 2327309.7291666665
[2025-10-07 15:59:41] 2025-10-07 19:58:39,464 | INFO     | -- intersect: 33014661436.695152
[2025-10-07 15:59:41] 2025-10-07 19:58:39,464 | INFO     | intersect: 33014661436.695152
[2025-10-07 15:59:41] 2025-10-07 19:58:39,464 | INFO     | chi2: 0.8472014984364165
[2025-10-07 15:59:41] 2025-10-07 19:58:39,465 | INFO     | current chi2=0.8472014984364165 (change=55.06843432099563 %)
[2025-10-07 15:59:41] 2025-10-07 19:58:39,465 | INFO     | sum of square deviations: 233641590.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,465 | INFO     | sum of deviations: -4996430456.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,465 | INFO     | mean x: 1759864359.0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,465 | INFO     | mean y: 2326784.901098901
[2025-10-07 15:59:41] 2025-10-07 19:58:39,465 | INFO     | -- intersect: 37637064169.35615
[2025-10-07 15:59:41] 2025-10-07 19:58:39,465 | INFO     | intersect: 37637064169.35615
[2025-10-07 15:59:41] 2025-10-07 19:58:39,465 | INFO     | chi2: 0.8479796550850983
[2025-10-07 15:59:41] 2025-10-07 19:58:39,465 | INFO     | current chi2=0.8479796550850983 (change=-0.09185024461335534 %)
[2025-10-07 15:59:41] 2025-10-07 19:58:39,465 | INFO     | left removable region: 20
[2025-10-07 15:59:41] 2025-10-07 19:58:39,466 | INFO     | sum of square deviations: 106336877.5
[2025-10-07 15:59:41] 2025-10-07 19:58:39,466 | INFO     | sum of deviations: 242717688.50000006
[2025-10-07 15:59:41] 2025-10-07 19:58:39,466 | INFO     | mean x: 1759864328.5
[2025-10-07 15:59:41] 2025-10-07 19:58:39,466 | INFO     | mean y: 2352490.3285714285
[2025-10-07 15:59:41] 2025-10-07 19:58:39,466 | INFO     | -- intersect: -4014600159.8667927
[2025-10-07 15:59:41] 2025-10-07 19:58:39,466 | INFO     | intersect: -4014600159.8667927
[2025-10-07 15:59:41] 2025-10-07 19:58:39,466 | INFO     | chi2: 6.107555378679806e-05
[2025-10-07 15:59:41] 2025-10-07 19:58:39,466 | INFO     | -- intersect: -4014600159.8667927
[2025-10-07 15:59:41] 2025-10-07 19:58:39,466 | INFO     | current memory leak: 2.28 B/s (using 70 data points, chi2=0.00)
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | could have reported an average CPU frequency of 3812 MHz (7 samples)
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | ..............................
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | . Timing measurements:
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | . get job = 0 s
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | . initial setup = 1 s
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | . payload setup = 2 s
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | . stage-in = 0 s
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | . payload execution = 6110 s
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | . stage-out = 0 s
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | . log creation = 0 s
[2025-10-07 15:59:41] 2025-10-07 19:58:39,467 | INFO     | ..............................
[2025-10-07 15:59:41] 2025-10-07 19:58:39,532 | INFO     | 
[2025-10-07 15:59:41] 2025-10-07 19:58:39,532 | INFO     | job summary report
[2025-10-07 15:59:41] 2025-10-07 19:58:39,532 | INFO     | --------------------------------------------------
[2025-10-07 15:59:41] 2025-10-07 19:58:39,532 | INFO     | PanDA job id: 6833424031
[2025-10-07 15:59:41] 2025-10-07 19:58:39,532 | INFO     | task id: 46376905
[2025-10-07 15:59:41] 2025-10-07 19:58:39,532 | INFO     | errors: (none)
[2025-10-07 15:59:41] 2025-10-07 19:58:39,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 15:59:41] 2025-10-07 19:58:39,532 | INFO     | pilot state: finished 
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | transexitcode: 0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | exeerrorcode: 0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | exeerrordiag: 
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | exitcode: 0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | exitmsg: OK
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | cpuconsumptiontime: 23899 s
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | nevents: 400
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | neventsw: 0
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | pid: 1135993
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | pgrp: 1135993
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | corecount: 5
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | event service: False
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | sizes: {0: 2348684, 1: 2348883, 3: 2349145, 11: 2349173, 6116: 2376097, 6117: 2385292, 6118: 2385292, 6121: 2385486}
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | --------------------------------------------------
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | 
[2025-10-07 15:59:41] 2025-10-07 19:58:39,533 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 15:59:41] 2025-10-07 19:58:39,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 15:59:41] 2025-10-07 19:58:39,549 | INFO     | job 6833424031 has completed (purged errors)
[2025-10-07 15:59:41] 2025-10-07 19:58:39,549 | INFO     | overall cleanup function is called
[2025-10-07 15:59:41] 2025-10-07 19:58:40,556 | INFO     | --- collectZombieJob: --- 10, [1135993]
[2025-10-07 15:59:41] 2025-10-07 19:58:40,556 | INFO     | zombie collector waiting for pid 1135993
[2025-10-07 15:59:41] 2025-10-07 19:58:40,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 15:59:41] 2025-10-07 19:58:40,556 | INFO     | collected zombie processes
[2025-10-07 15:59:41] 2025-10-07 19:58:40,556 | INFO     | will attempt to kill all subprocesses of pid=1135993
[2025-10-07 15:59:41] 2025-10-07 19:58:40,704 | INFO     | process IDs to be killed: [1135993] (in reverse order)
[2025-10-07 15:59:41] 2025-10-07 19:58:40,758 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 15:59:41] 2025-10-07 19:58:40,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 15:59:41] 2025-10-07 19:58:40,762 | INFO     | did not find any defunct processes belonging to 1135993
[2025-10-07 15:59:41] 2025-10-07 19:58:40,766 | INFO     | did not find any defunct processes belonging to 1135993
[2025-10-07 15:59:41] 2025-10-07 19:58:40,766 | INFO     | ready for new job
[2025-10-07 15:59:41] 2025-10-07 19:58:40,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 15:59:41] 2025-10-07 19:58:40,767 | INFO     | ***************************************
[2025-10-07 15:59:41] 2025-10-07 19:58:40,767 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 15:59:41] 2025-10-07 19:58:40,767 | INFO     | ***************************************
[2025-10-07 15:59:41] 2025-10-07 19:58:40,768 | INFO     | 
[2025-10-07 15:59:41] 2025-10-07 19:58:40,769 | INFO     | architecture information:
[2025-10-07 15:59:41] 2025-10-07 19:58:40,769 | INFO     | executing command: cat /etc/os-release
[2025-10-07 15:59:41] 2025-10-07 19:58:40,780 | INFO     | cat /etc/os-release:
[2025-10-07 15:59:41] NAME="CentOS Linux"
[2025-10-07 15:59:41] VERSION="7 (Core)"
[2025-10-07 15:59:41] ID="centos"
[2025-10-07 15:59:41] ID_LIKE="rhel fedora"
[2025-10-07 15:59:41] VERSION_ID="7"
[2025-10-07 15:59:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 15:59:41] ANSI_COLOR="0;31"
[2025-10-07 15:59:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 15:59:41] HOME_URL="https://www.centos.org/"
[2025-10-07 15:59:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 15:59:41] 
[2025-10-07 15:59:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 15:59:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 15:59:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 15:59:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 15:59:41] 
[2025-10-07 15:59:41] 2025-10-07 19:58:40,780 | INFO     | ***************************************
[2025-10-07 15:59:41] 2025-10-07 19:58:41,283 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-07 15:59:41] 2025-10-07 19:58:41,295 | INFO     | sufficient remaining disk space (148646133760 B)
[2025-10-07 15:59:41] 2025-10-07 19:58:41,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 15:59:41] 2025-10-07 19:58:41,295 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 15:59:41] 2025-10-07 19:58:41,296 | INFO     | update_server=False
[2025-10-07 15:59:41] 2025-10-07 19:58:41,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 15:59:41] 2025-10-07 19:58:41,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:59:41] 2025-10-07 19:58:41,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 15:59:41] 2025-10-07 19:58:41,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:59:41] 2025-10-07 19:58:41,633 | INFO     | aborting loop
[2025-10-07 15:59:41] 2025-10-07 19:58:41,634 | INFO     | all job control threads have been joined
[2025-10-07 15:59:41] 2025-10-07 19:58:41,846 | INFO     | all data control threads have been joined
[2025-10-07 15:59:41] 2025-10-07 19:58:41,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 15:59:41] 2025-10-07 19:58:42,297 | INFO     | [job] retrieve thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:42,301 | INFO     | [job] queue monitor thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:42,323 | INFO     | [payload] validate_post thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:42,348 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:42,348 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:42,466 | INFO     | all payload control threads have been joined
[2025-10-07 15:59:41] 2025-10-07 19:58:42,637 | INFO     | [job] control thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:42,638 | INFO     | [job] job monitor thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:42,851 | INFO     | [data] control thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:42,878 | INFO     | [data] copytool_in thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:43,301 | INFO     | [data] copytool_out thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:43,365 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:43,383 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:43,471 | INFO     | [payload] control thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:43,482 | INFO     | [job] validate thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:43,556 | INFO     | [payload] failed_post thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:58:45,921 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 15:59:41] 2025-10-07 19:59:10,861 | INFO     | PID=1119460 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 15:59:41] 2025-10-07 19:59:10,861 | INFO     | .. there are 8 such processes running
[2025-10-07 15:59:41] 2025-10-07 19:59:10,862 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 15:59:41] 2025-10-07 19:59:10,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 15:59:41] 2025-10-07 19:59:10,862 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 15:59:41] 2025-10-07 19:59:35,255 | INFO     | [monitor] cgroup control has ended
[2025-10-07 15:59:41] 2025-10-07 19:59:36,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128002944194368)>', '<ExcThread(monitor, started 128002079835904)>']
[2025-10-07 15:59:41] 2025-10-07 19:59:36,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 15:59:41] 2025-10-07 19:59:36,976 | INFO     | [monitor] control thread has ended
[2025-10-07 15:59:41] 2025-10-07 19:59:41,565 | INFO     | all workflow threads have been joined
[2025-10-07 15:59:41] 2025-10-07 19:59:41,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 15:59:41] 2025-10-07 19:59:41,565 | INFO     | traces error code: 0
[2025-10-07 15:59:41] 2025-10-07 19:59:41,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 15:59:41] 2025-10-07 19:59:41,638 [wrapper] ==== pilot stdout END ====
[2025-10-07 15:59:41] 2025-10-07 19:59:41,640 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 15:59:41] 2025-10-07 19:59:41,642 [wrapper] pilotpid: 1119460
[2025-10-07 15:59:41] 2025-10-07 19:59:41,644 [wrapper] Pilot exit status: 0
[2025-10-07 15:59:41] 2025-10-07 19:59:41,651 [wrapper] pandaids: 6833424031
[2025-10-07 15:59:41] 2025-10-07 19:59:41,685 [wrapper] cleanup supervisor_pilot 1202730 1119462
[2025-10-07 15:59:41] 2025-10-07 19:59:41,687 [wrapper] Test setup, not cleaning
[2025-10-07 15:59:41] 2025-10-07 19:59:41,689 [wrapper] apfmon messages muted
[2025-10-07 15:59:41] 2025-10-07 19:59:41,691 [wrapper] ==== wrapper stdout END ====
[2025-10-07 15:59:41] 2025-10-07 19:59:41,693 [wrapper] ==== wrapper stderr END ====
[2025-10-07 15:59:41]  *** Error codes and diagnostics ***
[2025-10-07 15:59:41]     "exeErrorCode": 0,
[2025-10-07 15:59:41]     "exeErrorDiag": "",
[2025-10-07 15:59:41]     "pilotErrorCode": 0,
[2025-10-07 15:59:41]     "pilotErrorDiag": "",
[2025-10-07 15:59:41]  *** Listing of results directory ***
[2025-10-07 15:59:41] total 382640
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc    552446 Oct  7 04:07 pilot3.tar.gz
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc      5112 Oct  7 04:24 queuedata.json
[2025-10-07 15:59:41] -rwx------ 1 boinc boinc     36292 Oct  7 04:24 runpilot2-wrapper.sh
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc       100 Oct  7 14:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 15:59:41] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 14:16 run_atlas
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc       105 Oct  7 14:16 job.xml
[2025-10-07 15:59:41] -rw-r--r-- 2 boinc boinc     15120 Oct  7 14:16 start_atlas.sh
[2025-10-07 15:59:41] drwxrwx--x 2 boinc boinc      4096 Oct  7 14:16 shared
[2025-10-07 15:59:41] -rw-r--r-- 2 boinc boinc    565605 Oct  7 14:16 input.tar.gz
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc      9722 Oct  7 14:16 init_data.xml
[2025-10-07 15:59:41] -rw-r--r-- 2 boinc boinc 212507900 Oct  7 14:16 EVNT.46376901._004873.pool.root.1
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc         0 Oct  7 14:16 boinc_setup_complete
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc         0 Oct  7 14:16 boinc_lockfile
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc      2521 Oct  7 14:16 pandaJob.out
[2025-10-07 15:59:41] -rw------- 1 boinc boinc    977520 Oct  7 14:16 agis_schedconf.cvmfs.json
[2025-10-07 15:59:41] -rw------- 1 boinc boinc   1560401 Oct  7 14:16 agis_ddmendpoints.agis.ALL.json
[2025-10-07 15:59:41] drwx------ 4 boinc boinc      4096 Oct  7 14:16 pilot3
[2025-10-07 15:59:41] -rw------- 1 boinc boinc 173043644 Oct  7 15:58 HITS.46376905._130978.pool.root.1
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc       529 Oct  7 15:58 boinc_task_state.xml
[2025-10-07 15:59:41] -rw------- 1 boinc boinc      1025 Oct  7 15:58 memory_monitor_summary.json
[2025-10-07 15:59:41] -rw------- 1 boinc boinc    296673 Oct  7 15:58 log.46376905._130978.job.log.tgz.1
[2025-10-07 15:59:41] -rw------- 1 boinc boinc      7742 Oct  7 15:58 heartbeat.json
[2025-10-07 15:59:41] -rw------- 1 boinc boinc        95 Oct  7 15:59 pilot_heartbeat.json
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc        27 Oct  7 15:59 wrapper_checkpoint.txt
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc      8192 Oct  7 15:59 boinc_mmap_file
[2025-10-07 15:59:41] -rw------- 1 boinc boinc      4831 Oct  7 15:59 pilotlog.txt
[2025-10-07 15:59:41] -rw------- 1 boinc boinc    896502 Oct  7 15:59 log.46376905._130978.job.log.1
[2025-10-07 15:59:41] -rw------- 1 boinc boinc       357 Oct  7 15:59 output.list
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc       620 Oct  7 15:59 runtime_log
[2025-10-07 15:59:41] -rw------- 1 boinc boinc   1208320 Oct  7 15:59 result.tar.gz
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc      8764 Oct  7 15:59 runtime_log.err
[2025-10-07 15:59:41] -rw------- 1 boinc boinc       644 Oct  7 15:59 KvMMDmgAIQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDVWNDmQNRQYn.diag
[2025-10-07 15:59:41] -rw-r--r-- 1 boinc boinc     20959 Oct  7 15:59 stderr.txt
[2025-10-07 15:59:41] HITS file was successfully produced:
[2025-10-07 15:59:41] -rw------- 1 boinc boinc 173043644 Oct  7 15:58 shared/HITS.pool.root.1
[2025-10-07 15:59:41]  *** Contents of shared directory: ***
[2025-10-07 15:59:41] total 378276
[2025-10-07 15:59:41] -rw-r--r-- 2 boinc boinc     15120 Oct  7 14:16 start_atlas.sh
[2025-10-07 15:59:41] -rw-r--r-- 2 boinc boinc    565605 Oct  7 14:16 input.tar.gz
[2025-10-07 15:59:41] -rw-r--r-- 2 boinc boinc 212507900 Oct  7 14:16 ATLAS.root_0
[2025-10-07 15:59:41] -rw------- 1 boinc boinc 173043644 Oct  7 15:58 HITS.pool.root.1
[2025-10-07 15:59:41] -rw------- 1 boinc boinc   1208320 Oct  7 15:59 result.tar.gz
15:59:43 (1105073): run_atlas exited; CPU time 23987.236023
15:59:43 (1105073): called boinc_finish(0)

</stderr_txt>
]]>

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