Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:21:13 (3519721): wrapper (7.7.26015): starting
14:21:13 (3519721): wrapper: running run_atlas (--nthreads 11)
[2025-10-07 14:21:13] Arguments: --nthreads 11
[2025-10-07 14:21:13] Threads: 11
[2025-10-07 14:21:13] Checking for CVMFS
[2025-10-07 14:21:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 14:21:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 14:21:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 14:21:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 14:21:15] 2.13.2.0 8406 29658 121464 151444 2 353 30256489 40960000 26513 16776704 0 193448572 99.843 75634220 51121 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 14:21:15] CVMFS is ok
[2025-10-07 14:21:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 14:21:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 14:21:15] Further information can be found at the LHC@home message board.
[2025-10-07 14:21:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 14:21:15] Checking for apptainer binary...
[2025-10-07 14:21:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 14:21:15] Running /usr/bin/apptainer --version
[2025-10-07 14:21:15] apptainer version 1.4.2-1.el9
[2025-10-07 14:21:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 14:21:16] c-208-37.aglt2.org
[2025-10-07 14:21:16] apptainer works
[2025-10-07 14:21:16] Set ATHENA_PROC_NUMBER=11
[2025-10-07 14:21:16] Set ATHENA_CORE_NUMBER=11
[2025-10-07 14:21:16] Starting ATLAS job with PandaID=6833155651
[2025-10-07 14:21:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 15:10:43]  *** The last 200 lines of the pilot log: ***
[2025-10-07 15:10:43]  replicas=None
[2025-10-07 15:10:43]  scope=mc23_13p6TeV
[2025-10-07 15:10:43]  status=None
[2025-10-07 15:10:43]  status_code=0
[2025-10-07 15:10:43]  storage_token=
[2025-10-07 15:10:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6833155651/log.46376905._122547.job.log.tgz.1
[2025-10-07 15:10:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/b5/log.46376905._122547.job.log.tgz.1
[2025-10-07 15:10:43]  workdir=None
[2025-10-07 15:10:43] ]
[2025-10-07 15:10:43] 2025-10-07 19:09:54,967 | INFO     | transferring file log.46376905._122547.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6833155651/log.46376905._122547.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-07 15:10:43] 2025-10-07 19:09:54,968 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6833155651/log.46376905._122547.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._122547.job
[2025-10-07 15:10:43] 2025-10-07 19:09:54,987 | INFO     | adding to output.list: log.46376905._122547.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/b5/log.46376905._122547.job.log.tg
[2025-10-07 15:10:43] 2025-10-07 19:09:54,988 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 15:10:43] 2025-10-07 19:09:54,988 | INFO     | summary of transferred files:
[2025-10-07 15:10:43] 2025-10-07 19:09:54,988 | INFO     |  -- lfn=log.46376905._122547.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 15:10:43] 2025-10-07 19:09:54,988 | INFO     | stage-out finished correctly
[2025-10-07 15:10:43] 2025-10-07 19:09:55,040 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 15:10:43] 2025-10-07 19:09:55,088 | INFO     | job 6833155651 has state=finished
[2025-10-07 15:10:43] 2025-10-07 19:09:55,088 | INFO     | preparing for final server update for job 6833155651 in state='finished'
[2025-10-07 15:10:43] 2025-10-07 19:09:55,147 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-07 15:10:43] 2025-10-07 19:09:55,147 | INFO     | this job has now completed (state=finished)
[2025-10-07 15:10:43] 2025-10-07 19:09:55,147 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 15:10:43] 2025-10-07 19:09:55,147 | INFO     | log transfer has been attempted: DONE
[2025-10-07 15:10:43] 2025-10-07 19:09:55,147 | INFO     | job 6833155651 has finished - writing final server update
[2025-10-07 15:10:43] 2025-10-07 19:09:55,147 | INFO     | total number of processed events: 400 (read)
[2025-10-07 15:10:43] 2025-10-07 19:09:55,158 | INFO     | executing command: lscpu
[2025-10-07 15:10:43] 2025-10-07 19:09:55,228 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 15:10:43] 2025-10-07 19:09:55,534 | INFO     | time since job start (2842s) is within the limit (172800.0s)
[2025-10-07 15:10:43] 2025-10-07 19:09:56,713 | INFO     | monitor loop #221: job 0:6833155651 is in state 'finished'
[2025-10-07 15:10:43] 2025-10-07 19:09:56,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 15:10:43] 2025-10-07 19:09:57,049 | INFO     | PID=3523787 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-07 15:10:43] 2025-10-07 19:09:57,049 | INFO     | .. there are 19 such processes running
[2025-10-07 15:10:43] 2025-10-07 19:09:58,050 | INFO     | time since job start (2845s) is within the limit (172800.0s)
[2025-10-07 15:10:43] 2025-10-07 19:09:59,220 | INFO     | monitor loop #222: job 0:6833155651 is in state 'finished'
[2025-10-07 15:10:43] 2025-10-07 19:09:59,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 15:10:43] 2025-10-07 19:10:00,055 | INFO     | time since job start (2847s) is within the limit (172800.0s)
[2025-10-07 15:10:43] 2025-10-07 19:10:00,610 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 15:10:43] 2025-10-07 19:10:00,615 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3757.110328125
[2025-10-07 15:10:43] 2025-10-07 19:10:00,628 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6833155651/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 15:10:43] 2025-10-07 19:10:00,628 | INFO     | extracted standard info from prmon json
[2025-10-07 15:10:43] 2025-10-07 19:10:00,628 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 15:10:43] 2025-10-07 19:10:00,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 15:10:43] 2025-10-07 19:10:00,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 15:10:43] 2025-10-07 19:10:00,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 15:10:43] 2025-10-07 19:10:00,629 | INFO     | fitting pss+swap vs Time
[2025-10-07 15:10:43] 2025-10-07 19:10:00,629 | INFO     | sum of square deviations: 15695178.0
[2025-10-07 15:10:43] 2025-10-07 19:10:00,629 | INFO     | sum of deviations: 5719305649.0
[2025-10-07 15:10:43] 2025-10-07 19:10:00,629 | INFO     | mean x: 1759862911.0
[2025-10-07 15:10:43] 2025-10-07 19:10:00,629 | INFO     | mean y: 2619946.4864864866
[2025-10-07 15:10:43] 2025-10-07 19:10:00,629 | INFO     | -- intersect: -641289494634.6852
[2025-10-07 15:10:43] 2025-10-07 19:10:00,629 | INFO     | intersect: -641289494634.6852
[2025-10-07 15:10:43] 2025-10-07 19:10:00,629 | INFO     | chi2: 0.5574367150595675
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | -- intersect: -641289494634.6852
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | current memory leak: 364.40 B/s (using 37 data points, chi2=0.56)
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | could have reported an average CPU frequency of 3759 MHz (5 samples)
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | ..............................
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | . Timing measurements:
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | . get job = 0 s
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | . initial setup = 8 s
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | . payload setup = 47 s
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | . stage-in = 0 s
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | . payload execution = 2712 s
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | . stage-out = 0 s
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | . log creation = 0 s
[2025-10-07 15:10:43] 2025-10-07 19:10:00,630 | INFO     | ..............................
[2025-10-07 15:10:43] 2025-10-07 19:10:00,778 | INFO     | 
[2025-10-07 15:10:43] 2025-10-07 19:10:00,778 | INFO     | job summary report
[2025-10-07 15:10:43] 2025-10-07 19:10:00,778 | INFO     | --------------------------------------------------
[2025-10-07 15:10:43] 2025-10-07 19:10:00,778 | INFO     | PanDA job id: 6833155651
[2025-10-07 15:10:43] 2025-10-07 19:10:00,778 | INFO     | task id: 46376905
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | errors: (none)
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | pilot state: finished 
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | transexitcode: 0
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | exeerrorcode: 0
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | exeerrordiag: 
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | exitcode: 0
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | exitmsg: OK
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | cpuconsumptiontime: 19770 s
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | nevents: 400
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | neventsw: 0
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | pid: 3541749
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | pgrp: 3541749
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | corecount: 11
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | event service: False
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | sizes: {0: 2348649, 1: 2348848, 12: 2348848, 22: 2348876, 33: 2348904, 36: 2349222, 44: 2349378, 2763: 2374645, 2764: 2374644, 2765: 2383754, 2771: 2383924}
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | --------------------------------------------------
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | 
[2025-10-07 15:10:43] 2025-10-07 19:10:00,779 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,795 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,796 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 15:10:43] 2025-10-07 19:10:00,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,796 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 15:10:43] 2025-10-07 19:10:00,796 | INFO     | job 6833155651 has completed (purged errors)
[2025-10-07 15:10:43] 2025-10-07 19:10:00,796 | INFO     | overall cleanup function is called
[2025-10-07 15:10:43] 2025-10-07 19:10:01,804 | INFO     | --- collectZombieJob: --- 10, [3541749]
[2025-10-07 15:10:43] 2025-10-07 19:10:01,804 | INFO     | zombie collector waiting for pid 3541749
[2025-10-07 15:10:43] 2025-10-07 19:10:01,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 15:10:43] 2025-10-07 19:10:01,804 | INFO     | collected zombie processes
[2025-10-07 15:10:43] 2025-10-07 19:10:01,804 | INFO     | will attempt to kill all subprocesses of pid=3541749
[2025-10-07 15:10:43] 2025-10-07 19:10:02,154 | INFO     | process IDs to be killed: [3541749] (in reverse order)
[2025-10-07 15:10:43] 2025-10-07 19:10:02,292 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 15:10:43] 2025-10-07 19:10:02,292 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 15:10:43] 2025-10-07 19:10:02,308 | INFO     | did not find any defunct processes belonging to 3541749
[2025-10-07 15:10:43] 2025-10-07 19:10:02,322 | INFO     | did not find any defunct processes belonging to 3541749
[2025-10-07 15:10:43] 2025-10-07 19:10:02,322 | INFO     | ready for new job
[2025-10-07 15:10:43] 2025-10-07 19:10:02,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 15:10:43] 2025-10-07 19:10:02,324 | INFO     | ***************************************
[2025-10-07 15:10:43] 2025-10-07 19:10:02,324 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 15:10:43] 2025-10-07 19:10:02,324 | INFO     | ***************************************
[2025-10-07 15:10:43] 2025-10-07 19:10:02,324 | INFO     | 
[2025-10-07 15:10:43] 2025-10-07 19:10:02,329 | INFO     | architecture information:
[2025-10-07 15:10:43] 2025-10-07 19:10:02,329 | INFO     | executing command: cat /etc/os-release
[2025-10-07 15:10:43] 2025-10-07 19:10:02,349 | INFO     | cat /etc/os-release:
[2025-10-07 15:10:43] NAME="CentOS Linux"
[2025-10-07 15:10:43] VERSION="7 (Core)"
[2025-10-07 15:10:43] ID="centos"
[2025-10-07 15:10:43] ID_LIKE="rhel fedora"
[2025-10-07 15:10:43] VERSION_ID="7"
[2025-10-07 15:10:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 15:10:43] ANSI_COLOR="0;31"
[2025-10-07 15:10:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 15:10:43] HOME_URL="https://www.centos.org/"
[2025-10-07 15:10:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 15:10:43] 
[2025-10-07 15:10:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 15:10:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 15:10:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 15:10:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 15:10:43] 
[2025-10-07 15:10:43] 2025-10-07 19:10:02,350 | INFO     | ***************************************
[2025-10-07 15:10:43] 2025-10-07 19:10:02,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 15:10:43] 2025-10-07 19:10:02,893 | INFO     | sufficient remaining disk space (172815810560 B)
[2025-10-07 15:10:43] 2025-10-07 19:10:02,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 15:10:43] 2025-10-07 19:10:02,894 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 15:10:43] 2025-10-07 19:10:02,894 | INFO     | update_server=False
[2025-10-07 15:10:43] 2025-10-07 19:10:02,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 15:10:43] 2025-10-07 19:10:02,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:10:43] 2025-10-07 19:10:02,894 | INFO     | aborting loop
[2025-10-07 15:10:43] 2025-10-07 19:10:03,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 15:10:43] 2025-10-07 19:10:03,477 | INFO     | all data control threads have been joined
[2025-10-07 15:10:43] 2025-10-07 19:10:03,899 | INFO     | [job] job monitor thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:03,900 | INFO     | [job] retrieve thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:04,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:04,182 | INFO     | all job control threads have been joined
[2025-10-07 15:10:43] 2025-10-07 19:10:04,254 | INFO     | all payload control threads have been joined
[2025-10-07 15:10:43] 2025-10-07 19:10:04,269 | INFO     | [job] validate thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:04,434 | INFO     | [payload] validate_post thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:04,472 | INFO     | [data] copytool_in thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:04,483 | INFO     | [data] control thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:04,791 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:04,895 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:05,071 | INFO     | [data] copytool_out thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:05,188 | INFO     | [job] control thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:05,260 | INFO     | [payload] control thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:05,334 | INFO     | [payload] failed_post thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:05,381 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:05,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 15:10:43] 2025-10-07 19:10:05,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:10:43] 2025-10-07 19:10:06,704 | INFO     | [job] queue monitor thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:09,618 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 15:10:43] 2025-10-07 19:10:33,536 | INFO     | PID=3523787 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 15:10:43] 2025-10-07 19:10:33,536 | INFO     | .. there are 19 such processes running
[2025-10-07 15:10:43] 2025-10-07 19:10:33,536 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 15:10:43] 2025-10-07 19:10:33,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 15:10:43] 2025-10-07 19:10:33,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 15:10:43] 2025-10-07 19:10:37,142 | INFO     | [monitor] cgroup control has ended
[2025-10-07 15:10:43] 2025-10-07 19:10:37,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325610215232)>', '<ExcThread(monitor, started 140324903057152)>']
[2025-10-07 15:10:43] 2025-10-07 19:10:38,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 15:10:43] 2025-10-07 19:10:38,564 | INFO     | [monitor] control thread has ended
[2025-10-07 15:10:43] 2025-10-07 19:10:42,716 | INFO     | all workflow threads have been joined
[2025-10-07 15:10:43] 2025-10-07 19:10:42,716 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 15:10:43] 2025-10-07 19:10:42,717 | INFO     | traces error code: 0
[2025-10-07 15:10:43] 2025-10-07 19:10:42,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 15:10:43] 2025-10-07 19:10:42,827 [wrapper] ==== pilot stdout END ====
[2025-10-07 15:10:43] 2025-10-07 19:10:42,829 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 15:10:43] 2025-10-07 19:10:42,831 [wrapper] pilotpid: 3523787
[2025-10-07 15:10:43] 2025-10-07 19:10:42,848 [wrapper] Pilot exit status: 0
[2025-10-07 15:10:43] 2025-10-07 19:10:42,879 [wrapper] pandaids: 6833155651
[2025-10-07 15:10:43] 2025-10-07 19:10:43,013 [wrapper] cleanup supervisor_pilot 3656218 3523788
[2025-10-07 15:10:43] 2025-10-07 19:10:43,015 [wrapper] Test setup, not cleaning
[2025-10-07 15:10:43] 2025-10-07 19:10:43,019 [wrapper] apfmon messages muted
[2025-10-07 15:10:43] 2025-10-07 19:10:43,020 [wrapper] ==== wrapper stdout END ====
[2025-10-07 15:10:43] 2025-10-07 19:10:43,035 [wrapper] ==== wrapper stderr END ====
[2025-10-07 15:10:43]  *** Error codes and diagnostics ***
[2025-10-07 15:10:43]     "exeErrorCode": 0,
[2025-10-07 15:10:43]     "exeErrorDiag": "",
[2025-10-07 15:10:43]     "pilotErrorCode": 0,
[2025-10-07 15:10:43]     "pilotErrorDiag": "",
[2025-10-07 15:10:43]  *** Listing of results directory ***
[2025-10-07 15:10:43] total 389540
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 19:42 queuedata.json
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 19:44 pilot3.tar.gz
[2025-10-07 15:10:43] -rwx------. 1 boincer umatlas     36292 Oct  6 19:44 runpilot2-wrapper.sh
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas       100 Oct  7 14:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 15:10:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  7 14:21 run_atlas
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas       105 Oct  7 14:21 job.xml
[2025-10-07 15:10:43] -rw-r--r--. 2 boincer umatlas 215545163 Oct  7 14:21 EVNT.46376901._004543.pool.root.1
[2025-10-07 15:10:43] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 14:21 start_atlas.sh
[2025-10-07 15:10:43] drwxrwx--x. 2 boincer umatlas      4096 Oct  7 14:21 shared
[2025-10-07 15:10:43] -rw-r--r--. 2 boincer umatlas    565602 Oct  7 14:21 input.tar.gz
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas         0 Oct  7 14:21 boinc_lockfile
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas      2521 Oct  7 14:21 pandaJob.out
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas    977512 Oct  7 14:22 agis_schedconf.cvmfs.json
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas   1560401 Oct  7 14:22 agis_ddmendpoints.agis.ALL.json
[2025-10-07 15:10:43] drwx------. 4 boincer umatlas      4096 Oct  7 14:22 pilot3
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas      7170 Oct  7 15:01 init_data.xml
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas       530 Oct  7 15:09 boinc_task_state.xml
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas 177893995 Oct  7 15:09 HITS.46376905._122547.pool.root.1
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas      1030 Oct  7 15:09 memory_monitor_summary.json
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas    355740 Oct  7 15:09 log.46376905._122547.job.log.tgz.1
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas      7785 Oct  7 15:10 heartbeat.json
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas        95 Oct  7 15:10 pilot_heartbeat.json
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas        27 Oct  7 15:10 wrapper_checkpoint.txt
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas      8192 Oct  7 15:10 boinc_mmap_file
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas      4825 Oct  7 15:10 pilotlog.txt
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas    424702 Oct  7 15:10 log.46376905._122547.job.log.1
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas       357 Oct  7 15:10 output.list
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas       620 Oct  7 15:10 runtime_log
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas    798720 Oct  7 15:10 result.tar.gz
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas       651 Oct  7 15:10 Uc9MDmj39P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuDVNDm54f4Gm.diag
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas      8705 Oct  7 15:10 runtime_log.err
[2025-10-07 15:10:43] -rw-r--r--. 1 boincer umatlas     21970 Oct  7 15:10 stderr.txt
[2025-10-07 15:10:43] HITS file was successfully produced:
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas 177893995 Oct  7 15:09 shared/HITS.pool.root.1
[2025-10-07 15:10:43]  *** Contents of shared directory: ***
[2025-10-07 15:10:43] total 385584
[2025-10-07 15:10:43] -rw-r--r--. 2 boincer umatlas 215545163 Oct  7 14:21 ATLAS.root_0
[2025-10-07 15:10:43] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 14:21 start_atlas.sh
[2025-10-07 15:10:43] -rw-r--r--. 2 boincer umatlas    565602 Oct  7 14:21 input.tar.gz
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas 177893995 Oct  7 15:09 HITS.pool.root.1
[2025-10-07 15:10:43] -rw-------. 1 boincer umatlas    798720 Oct  7 15:10 result.tar.gz
15:10:45 (3519721): run_atlas exited; CPU time 19835.927824
15:10:45 (3519721): called boinc_finish(0)

</stderr_txt>
]]>

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