Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
16:39:14 (869705): wrapper (7.7.26015): starting
16:39:14 (869705): wrapper: running run_atlas (--nthreads 4)
[2025-10-07 16:39:14] Arguments: --nthreads 4
[2025-10-07 16:39:14] Threads: 4
[2025-10-07 16:39:14] Checking for CVMFS
[2025-10-07 16:39:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 16:39:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 16:39:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 16:39:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 16:39:15] 2.11.0.0 223286 9216 110808 151442 3 188 3463125 4096001 6454 130560 0 54922620 99.998 319028 2008 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 16:39:15] CVMFS is ok
[2025-10-07 16:39:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 16:39:15] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 16:39:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 16:39:15] Further information can be found at the LHC@home message board.
[2025-10-07 16:39:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 16:39:15] Checking for apptainer binary...
[2025-10-07 16:39:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 16:39:15] Running /usr/bin/apptainer --version
[2025-10-07 16:39:15] apptainer version 1.4.2
[2025-10-07 16:39:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 16:39:15] x32-linux2
[2025-10-07 16:39:15] apptainer works
[2025-10-07 16:39:15] Set ATHENA_PROC_NUMBER=4
[2025-10-07 16:39:15] Set ATHENA_CORE_NUMBER=4
[2025-10-07 16:39:15] Starting ATLAS job with PandaID=6833424951
[2025-10-07 16:39:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 18:29:01]  *** The last 200 lines of the pilot log: ***
[2025-10-07 18:29:01] 2025-10-07 22:28:29,480 | INFO     | PID=873535 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 18:29:01] 2025-10-07 22:28:29,480 | INFO     | .. there are 8 such processes running
[2025-10-07 18:29:01] 2025-10-07 22:28:30,259 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 18:29:01] 2025-10-07 22:28:30,263 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3838.1983125
[2025-10-07 18:29:01] 2025-10-07 22:28:30,267 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6833424951/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 18:29:01] 2025-10-07 22:28:30,267 | INFO     | extracted standard info from prmon json
[2025-10-07 18:29:01] 2025-10-07 22:28:30,268 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 18:29:01] 2025-10-07 22:28:30,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 18:29:01] 2025-10-07 22:28:30,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 18:29:01] 2025-10-07 22:28:30,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 18:29:01] 2025-10-07 22:28:30,269 | INFO     | fitting pss+swap vs Time
[2025-10-07 18:29:01] 2025-10-07 22:28:30,270 | INFO     | sum of square deviations: 379832238.0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,270 | INFO     | sum of deviations: 6388131852.999997
[2025-10-07 18:29:01] 2025-10-07 22:28:30,270 | INFO     | mean x: 1759872818.0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,270 | INFO     | mean y: 2303241.887850467
[2025-10-07 18:29:01] 2025-10-07 22:28:30,270 | INFO     | -- intersect: -29595762643.96428
[2025-10-07 18:29:01] 2025-10-07 22:28:30,270 | INFO     | intersect: -29595762643.96428
[2025-10-07 18:29:01] 2025-10-07 22:28:30,270 | INFO     | chi2: 1.1108245982636775
[2025-10-07 18:29:01] 2025-10-07 22:28:30,270 | INFO     | sum of square deviations: 329031285.5
[2025-10-07 18:29:01] 2025-10-07 22:28:30,271 | INFO     | sum of deviations: 6154278135.5
[2025-10-07 18:29:01] 2025-10-07 22:28:30,271 | INFO     | mean x: 1759872665.5
[2025-10-07 18:29:01] 2025-10-07 22:28:30,271 | INFO     | mean y: 2302537.4215686275
[2025-10-07 18:29:01] 2025-10-07 22:28:30,271 | INFO     | -- intersect: -32914767491.625122
[2025-10-07 18:29:01] 2025-10-07 22:28:30,271 | INFO     | intersect: -32914767491.625122
[2025-10-07 18:29:01] 2025-10-07 22:28:30,271 | INFO     | chi2: 1.1127996561008155
[2025-10-07 18:29:01] 2025-10-07 22:28:30,271 | INFO     | current chi2=1.1127996561008155 (change=-0.17780105339990018 %)
[2025-10-07 18:29:01] 2025-10-07 22:28:30,271 | INFO     | right removable region: 101
[2025-10-07 18:29:01] 2025-10-07 22:28:30,271 | INFO     | sum of square deviations: 329031285.5
[2025-10-07 18:29:01] 2025-10-07 22:28:30,272 | INFO     | sum of deviations: -3302797420.0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,272 | INFO     | mean x: 1759872970.5
[2025-10-07 18:29:01] 2025-10-07 22:28:30,272 | INFO     | mean y: 2331395.6078431373
[2025-10-07 18:29:01] 2025-10-07 22:28:30,272 | INFO     | -- intersect: 17667836661.049038
[2025-10-07 18:29:01] 2025-10-07 22:28:30,272 | INFO     | intersect: 17667836661.049038
[2025-10-07 18:29:01] 2025-10-07 22:28:30,272 | INFO     | chi2: 0.00601212475420606
[2025-10-07 18:29:01] 2025-10-07 22:28:30,272 | INFO     | current chi2=0.00601212475420606 (change=99.45876920950406 %)
[2025-10-07 18:29:01] 2025-10-07 22:28:30,273 | INFO     | sum of square deviations: 282974608.0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,273 | INFO     | sum of deviations: -2880165203.0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,273 | INFO     | mean x: 1759873123.0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,273 | INFO     | mean y: 2329987.793814433
[2025-10-07 18:29:01] 2025-10-07 22:28:30,273 | INFO     | -- intersect: 17914627371.59137
[2025-10-07 18:29:01] 2025-10-07 22:28:30,273 | INFO     | intersect: 17914627371.59137
[2025-10-07 18:29:01] 2025-10-07 22:28:30,273 | INFO     | chi2: 0.005970088585556866
[2025-10-07 18:29:01] 2025-10-07 22:28:30,273 | INFO     | current chi2=0.005970088585556866 (change=0.6991898932201253 %)
[2025-10-07 18:29:01] 2025-10-07 22:28:30,273 | INFO     | left removable region: 20
[2025-10-07 18:29:01] 2025-10-07 22:28:30,274 | INFO     | sum of square deviations: 164765880.0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,274 | INFO     | sum of deviations: -1424680376.0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,274 | INFO     | mean x: 1759873245.0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,274 | INFO     | mean y: 2325301.8518518517
[2025-10-07 18:29:01] 2025-10-07 22:28:30,274 | INFO     | -- intersect: 15219413186.78859
[2025-10-07 18:29:01] 2025-10-07 22:28:30,274 | INFO     | intersect: 15219413186.78859
[2025-10-07 18:29:01] 2025-10-07 22:28:30,274 | INFO     | chi2: 0.004784634681502337
[2025-10-07 18:29:01] 2025-10-07 22:28:30,274 | INFO     | -- intersect: 15219413186.78859
[2025-10-07 18:29:01] 2025-10-07 22:28:30,274 | INFO     | current memory leak: -8.65 B/s (using 81 data points, chi2=0.00)
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | could have reported an average CPU frequency of 3807 MHz (7 samples)
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | ..............................
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | . Timing measurements:
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | . get job = 0 s
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | . initial setup = 2 s
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | . payload setup = 4 s
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | . stage-in = 0 s
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | . payload execution = 6516 s
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | . stage-out = 0 s
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | . log creation = 0 s
[2025-10-07 18:29:01] 2025-10-07 22:28:30,275 | INFO     | ..............................
[2025-10-07 18:29:01] 2025-10-07 22:28:30,341 | INFO     | 
[2025-10-07 18:29:01] 2025-10-07 22:28:30,341 | INFO     | job summary report
[2025-10-07 18:29:01] 2025-10-07 22:28:30,341 | INFO     | --------------------------------------------------
[2025-10-07 18:29:01] 2025-10-07 22:28:30,341 | INFO     | PanDA job id: 6833424951
[2025-10-07 18:29:01] 2025-10-07 22:28:30,341 | INFO     | task id: 46376905
[2025-10-07 18:29:01] 2025-10-07 22:28:30,341 | INFO     | errors: (none)
[2025-10-07 18:29:01] 2025-10-07 22:28:30,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | pilot state: finished 
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | transexitcode: 0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | exeerrorcode: 0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | exeerrordiag: 
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | exitcode: 0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | exitmsg: OK
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | cpuconsumptiontime: 25008 s
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | nevents: 400
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | neventsw: 0
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | pid: 880340
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | pgrp: 880340
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | corecount: 4
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | event service: False
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | sizes: {0: 2348656, 1: 2348855, 4: 2349117, 11: 2349145, 6524: 2376307, 6525: 2385319, 6527: 2385531, 6533: 2385725}
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | --------------------------------------------------
[2025-10-07 18:29:01] 2025-10-07 22:28:30,342 | INFO     | 
[2025-10-07 18:29:01] 2025-10-07 22:28:30,343 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,359 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 18:29:01] 2025-10-07 22:28:30,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,359 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 18:29:01] 2025-10-07 22:28:30,359 | INFO     | job 6833424951 has completed (purged errors)
[2025-10-07 18:29:01] 2025-10-07 22:28:30,359 | INFO     | overall cleanup function is called
[2025-10-07 18:29:01] 2025-10-07 22:28:31,367 | INFO     | --- collectZombieJob: --- 10, [880340]
[2025-10-07 18:29:01] 2025-10-07 22:28:31,367 | INFO     | zombie collector waiting for pid 880340
[2025-10-07 18:29:01] 2025-10-07 22:28:31,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 18:29:01] 2025-10-07 22:28:31,367 | INFO     | collected zombie processes
[2025-10-07 18:29:01] 2025-10-07 22:28:31,367 | INFO     | will attempt to kill all subprocesses of pid=880340
[2025-10-07 18:29:01] 2025-10-07 22:28:31,509 | INFO     | process IDs to be killed: [880340] (in reverse order)
[2025-10-07 18:29:01] 2025-10-07 22:28:31,564 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 18:29:01] 2025-10-07 22:28:31,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 18:29:01] 2025-10-07 22:28:31,568 | INFO     | did not find any defunct processes belonging to 880340
[2025-10-07 18:29:01] 2025-10-07 22:28:31,571 | INFO     | did not find any defunct processes belonging to 880340
[2025-10-07 18:29:01] 2025-10-07 22:28:31,571 | INFO     | ready for new job
[2025-10-07 18:29:01] 2025-10-07 22:28:31,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 18:29:01] 2025-10-07 22:28:31,573 | INFO     | ***************************************
[2025-10-07 18:29:01] 2025-10-07 22:28:31,573 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 18:29:01] 2025-10-07 22:28:31,573 | INFO     | ***************************************
[2025-10-07 18:29:01] 2025-10-07 22:28:31,573 | INFO     | 
[2025-10-07 18:29:01] 2025-10-07 22:28:31,574 | INFO     | architecture information:
[2025-10-07 18:29:01] 2025-10-07 22:28:31,575 | INFO     | executing command: cat /etc/os-release
[2025-10-07 18:29:01] 2025-10-07 22:28:31,585 | INFO     | cat /etc/os-release:
[2025-10-07 18:29:01] NAME="CentOS Linux"
[2025-10-07 18:29:01] VERSION="7 (Core)"
[2025-10-07 18:29:01] ID="centos"
[2025-10-07 18:29:01] ID_LIKE="rhel fedora"
[2025-10-07 18:29:01] VERSION_ID="7"
[2025-10-07 18:29:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 18:29:01] ANSI_COLOR="0;31"
[2025-10-07 18:29:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 18:29:01] HOME_URL="https://www.centos.org/"
[2025-10-07 18:29:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 18:29:01] 
[2025-10-07 18:29:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 18:29:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 18:29:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 18:29:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 18:29:01] 
[2025-10-07 18:29:01] 2025-10-07 22:28:31,586 | INFO     | ***************************************
[2025-10-07 18:29:01] 2025-10-07 22:28:32,086 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-10-07 18:29:01] 2025-10-07 22:28:32,100 | INFO     | sufficient remaining disk space (414000873472 B)
[2025-10-07 18:29:01] 2025-10-07 22:28:32,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 18:29:01] 2025-10-07 22:28:32,100 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 18:29:01] 2025-10-07 22:28:32,100 | INFO     | update_server=False
[2025-10-07 18:29:01] 2025-10-07 22:28:32,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 18:29:01] 2025-10-07 22:28:32,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 18:29:01] 2025-10-07 22:28:32,101 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 18:29:01] 2025-10-07 22:28:32,101 | INFO     | aborting loop
[2025-10-07 18:29:01] 2025-10-07 22:28:32,367 | INFO     | all data control threads have been joined
[2025-10-07 18:29:01] 2025-10-07 22:28:32,770 | INFO     | all payload control threads have been joined
[2025-10-07 18:29:01] 2025-10-07 22:28:33,102 | INFO     | [job] job monitor thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:33,103 | INFO     | [job] queue monitor thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:33,106 | INFO     | [job] retrieve thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:33,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 18:29:01] 2025-10-07 22:28:33,202 | INFO     | [payload] validate_post thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:33,322 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:33,372 | INFO     | [data] control thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:33,454 | INFO     | [data] copytool_in thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:33,600 | INFO     | all job control threads have been joined
[2025-10-07 18:29:01] 2025-10-07 22:28:33,754 | INFO     | [payload] failed_post thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:33,762 | INFO     | [monitor] cgroup control has ended
[2025-10-07 18:29:01] 2025-10-07 22:28:33,774 | INFO     | [payload] control thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:33,972 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:34,147 | INFO     | [job] validate thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:34,555 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:34,606 | INFO     | [job] control thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:35,134 | INFO     | [data] copytool_out thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:35,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 18:29:01] 2025-10-07 22:28:39,345 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:42,993 | INFO     | job.realtimelogging is not enabled
[2025-10-07 18:29:01] 2025-10-07 22:28:43,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 18:29:01] 2025-10-07 22:28:44,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130380678850368)>', '<ExcThread(monitor, started 130380325689088)>']
[2025-10-07 18:29:01] 2025-10-07 22:28:49,682 | INFO     | all workflow threads have been joined
[2025-10-07 18:29:01] 2025-10-07 22:28:49,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 18:29:01] 2025-10-07 22:28:49,683 | INFO     | traces error code: 0
[2025-10-07 18:29:01] 2025-10-07 22:28:49,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 18:29:01] 2025-10-07 22:29:01,733 | INFO     | PID=873535 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 18:29:01] 2025-10-07 22:29:01,733 | INFO     | .. there are 8 such processes running
[2025-10-07 18:29:01] 2025-10-07 22:29:01,734 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 18:29:01] 2025-10-07 22:29:01,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 18:29:01] 2025-10-07 22:29:01,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 18:29:01] 2025-10-07 22:29:01,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 18:29:01] 2025-10-07 22:29:01,734 | INFO     | [monitor] control thread has ended
[2025-10-07 18:29:01] 2025-10-07 22:29:01,801 [wrapper] ==== pilot stdout END ====
[2025-10-07 18:29:01] 2025-10-07 22:29:01,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 18:29:01] 2025-10-07 22:29:01,805 [wrapper] pilotpid: 873535
[2025-10-07 18:29:01] 2025-10-07 22:29:01,807 [wrapper] Pilot exit status: 0
[2025-10-07 18:29:01] 2025-10-07 22:29:01,815 [wrapper] pandaids: 6833424951
[2025-10-07 18:29:01] 2025-10-07 22:29:01,851 [wrapper] cleanup supervisor_pilot 1059693 873536
[2025-10-07 18:29:01] 2025-10-07 22:29:01,853 [wrapper] Test setup, not cleaning
[2025-10-07 18:29:01] 2025-10-07 22:29:01,855 [wrapper] apfmon messages muted
[2025-10-07 18:29:01] 2025-10-07 22:29:01,857 [wrapper] ==== wrapper stdout END ====
[2025-10-07 18:29:01] 2025-10-07 22:29:01,859 [wrapper] ==== wrapper stderr END ====
[2025-10-07 18:29:01]  *** Error codes and diagnostics ***
[2025-10-07 18:29:01]     "exeErrorCode": 0,
[2025-10-07 18:29:01]     "exeErrorDiag": "",
[2025-10-07 18:29:01]     "pilotErrorCode": 0,
[2025-10-07 18:29:01]     "pilotErrorDiag": "",
[2025-10-07 18:29:01]  *** Listing of results directory ***
[2025-10-07 18:29:01] total 395788
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc    552446 Oct  7 04:37 pilot3.tar.gz
[2025-10-07 18:29:01] -rwx------ 1 boinc boinc     36292 Oct  7 04:39 runpilot2-wrapper.sh
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc      5112 Oct  7 04:39 queuedata.json
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc       100 Oct  7 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 18:29:01] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 16:39 run_atlas
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc       105 Oct  7 16:39 job.xml
[2025-10-07 18:29:01] -rw-r--r-- 2 boinc boinc     15120 Oct  7 16:39 start_atlas.sh
[2025-10-07 18:29:01] drwxrwx--x 2 boinc boinc      4096 Oct  7 16:39 shared
[2025-10-07 18:29:01] -rw-r--r-- 2 boinc boinc    565598 Oct  7 16:39 input.tar.gz
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc      9449 Oct  7 16:39 init_data.xml
[2025-10-07 18:29:01] -rw-r--r-- 2 boinc boinc 215566768 Oct  7 16:39 EVNT.46376901._004883.pool.root.1
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc         0 Oct  7 16:39 boinc_lockfile
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc      2521 Oct  7 16:39 pandaJob.out
[2025-10-07 18:29:01] -rw------- 1 boinc boinc    977520 Oct  7 16:39 agis_schedconf.cvmfs.json
[2025-10-07 18:29:01] -rw------- 1 boinc boinc   1560401 Oct  7 16:39 agis_ddmendpoints.agis.ALL.json
[2025-10-07 18:29:01] drwx------ 4 boinc boinc      4096 Oct  7 16:39 pilot3
[2025-10-07 18:29:01] -rw------- 1 boinc boinc 183352835 Oct  7 18:27 HITS.46376905._131229.pool.root.1
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc       529 Oct  7 18:28 boinc_task_state.xml
[2025-10-07 18:29:01] -rw------- 1 boinc boinc      1025 Oct  7 18:28 memory_monitor_summary.json
[2025-10-07 18:29:01] -rw------- 1 boinc boinc    286079 Oct  7 18:28 log.46376905._131229.job.log.tgz.1
[2025-10-07 18:29:01] -rw------- 1 boinc boinc      7746 Oct  7 18:28 heartbeat.json
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc        27 Oct  7 18:29 wrapper_checkpoint.txt
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc      8192 Oct  7 18:29 boinc_mmap_file
[2025-10-07 18:29:01] -rw------- 1 boinc boinc        95 Oct  7 18:29 pilot_heartbeat.json
[2025-10-07 18:29:01] -rw------- 1 boinc boinc       821 Oct  7 18:29 pilotlog.txt
[2025-10-07 18:29:01] -rw------- 1 boinc boinc    955606 Oct  7 18:29 log.46376905._131229.job.log.1
[2025-10-07 18:29:01] -rw------- 1 boinc boinc       357 Oct  7 18:29 output.list
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc       620 Oct  7 18:29 runtime_log
[2025-10-07 18:29:01] -rw------- 1 boinc boinc   1259520 Oct  7 18:29 result.tar.gz
[2025-10-07 18:29:01] -rw------- 1 boinc boinc       643 Oct  7 18:29 TK2MDmePIQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmOMLMDmYHk0yn.diag
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc      8764 Oct  7 18:29 runtime_log.err
[2025-10-07 18:29:01] -rw-r--r-- 1 boinc boinc     21226 Oct  7 18:29 stderr.txt
[2025-10-07 18:29:01] HITS file was successfully produced:
[2025-10-07 18:29:01] -rw------- 1 boinc boinc 183352835 Oct  7 18:27 shared/HITS.pool.root.1
[2025-10-07 18:29:01]  *** Contents of shared directory: ***
[2025-10-07 18:29:01] total 391380
[2025-10-07 18:29:01] -rw-r--r-- 2 boinc boinc     15120 Oct  7 16:39 start_atlas.sh
[2025-10-07 18:29:01] -rw-r--r-- 2 boinc boinc    565598 Oct  7 16:39 input.tar.gz
[2025-10-07 18:29:01] -rw-r--r-- 2 boinc boinc 215566768 Oct  7 16:39 ATLAS.root_0
[2025-10-07 18:29:01] -rw------- 1 boinc boinc 183352835 Oct  7 18:27 HITS.pool.root.1
[2025-10-07 18:29:01] -rw------- 1 boinc boinc   1259520 Oct  7 18:29 result.tar.gz
18:29:03 (869705): run_atlas exited; CPU time 25099.264168
18:29:03 (869705): called boinc_finish(0)

</stderr_txt>
]]>

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