Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
16:35:10 (849941): wrapper (7.7.26015): starting
16:35:10 (849941): wrapper: running run_atlas (--nthreads 4)
[2025-10-07 16:35:10] Arguments: --nthreads 4
[2025-10-07 16:35:10] Threads: 4
[2025-10-07 16:35:10] Checking for CVMFS
[2025-10-07 16:35:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 16:35:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 16:35:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 16:35:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 16:35:11] 2.11.0.0 223286 9212 111696 151442 3 188 3463125 4096001 6436 130560 0 54859330 99.998 319028 2009 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 16:35:11] CVMFS is ok
[2025-10-07 16:35:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 16:35:11] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 16:35:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 16:35:11] Further information can be found at the LHC@home message board.
[2025-10-07 16:35:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 16:35:11] Checking for apptainer binary...
[2025-10-07 16:35:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 16:35:11] Running /usr/bin/apptainer --version
[2025-10-07 16:35:11] apptainer version 1.4.2
[2025-10-07 16:35:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 16:35:11] x32-linux2
[2025-10-07 16:35:11] apptainer works
[2025-10-07 16:35:11] Set ATHENA_PROC_NUMBER=4
[2025-10-07 16:35:11] Set ATHENA_CORE_NUMBER=4
[2025-10-07 16:35:11] Starting ATLAS job with PandaID=6833429862
[2025-10-07 16:35:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 18:14:34]  *** The last 200 lines of the pilot log: ***
[2025-10-07 18:14:34]  protocol_id=None
[2025-10-07 18:14:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-07 18:14:34]  replicas=None
[2025-10-07 18:14:34]  scope=mc23_13p6TeV
[2025-10-07 18:14:34]  status=None
[2025-10-07 18:14:34]  status_code=0
[2025-10-07 18:14:34]  storage_token=
[2025-10-07 18:14:34]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6833429862/log.46376905._133009.job.log.tgz.1
[2025-10-07 18:14:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/a5/log.46376905._133009.job.log.tgz.1
[2025-10-07 18:14:34]  workdir=None
[2025-10-07 18:14:34] ]
[2025-10-07 18:14:34] 2025-10-07 22:13:52,768 | INFO     | transferring file log.46376905._133009.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6833429862/log.46376905._133009.job.log.tgz.1 to /var/lib/boinc
[2025-10-07 18:14:34] 2025-10-07 22:13:52,768 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6833429862/log.46376905._133009.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.463769
[2025-10-07 18:14:34] 2025-10-07 22:13:52,783 | INFO     | adding to output.list: log.46376905._133009.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/a5/log.46376905._133009.job.log.tg
[2025-10-07 18:14:34] 2025-10-07 22:13:52,783 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 18:14:34] 2025-10-07 22:13:52,783 | INFO     | summary of transferred files:
[2025-10-07 18:14:34] 2025-10-07 22:13:52,783 | INFO     |  -- lfn=log.46376905._133009.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 18:14:34] 2025-10-07 22:13:52,784 | INFO     | stage-out finished correctly
[2025-10-07 18:14:34] 2025-10-07 22:13:53,312 | INFO     | time since job start (5914s) is within the limit (172800.0s)
[2025-10-07 18:14:34] 2025-10-07 22:13:54,642 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 18:14:34] 2025-10-07 22:13:54,706 | INFO     | job 6833429862 has state=finished
[2025-10-07 18:14:34] 2025-10-07 22:13:54,707 | INFO     | preparing for final server update for job 6833429862 in state='finished'
[2025-10-07 18:14:34] 2025-10-07 22:13:54,707 | INFO     | this job has now completed (state=finished)
[2025-10-07 18:14:34] 2025-10-07 22:13:54,707 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 18:14:34] 2025-10-07 22:13:54,707 | INFO     | log transfer has been attempted: DONE
[2025-10-07 18:14:34] 2025-10-07 22:13:54,707 | INFO     | job 6833429862 has finished - writing final server update
[2025-10-07 18:14:34] 2025-10-07 22:13:54,707 | INFO     | total number of processed events: 400 (read)
[2025-10-07 18:14:34] 2025-10-07 22:13:54,708 | INFO     | executing command: lscpu
[2025-10-07 18:14:34] 2025-10-07 22:13:54,737 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 18:14:34] 2025-10-07 22:13:55,314 | INFO     | time since job start (5916s) is within the limit (172800.0s)
[2025-10-07 18:14:34] 2025-10-07 22:13:56,327 | WARNING  | process 860579 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 18:14:34] 2025-10-07 22:13:56,327 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6833429862/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 18:14:34] 2025-10-07 22:13:56,481 | INFO     | number of running child processes to parent process 860579: 1
[2025-10-07 18:14:34] 2025-10-07 22:13:56,481 | INFO     | maximum number of monitored processes: 6
[2025-10-07 18:14:34] 2025-10-07 22:13:57,318 | INFO     | time since job start (5918s) is within the limit (172800.0s)
[2025-10-07 18:14:34] 2025-10-07 22:13:58,154 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 18:14:34] 2025-10-07 22:13:58,158 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3816.9810937500006
[2025-10-07 18:14:34] 2025-10-07 22:13:58,162 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6833429862/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 18:14:34] 2025-10-07 22:13:58,163 | INFO     | extracted standard info from prmon json
[2025-10-07 18:14:34] 2025-10-07 22:13:58,163 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 18:14:34] 2025-10-07 22:13:58,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 18:14:34] 2025-10-07 22:13:58,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 18:14:34] 2025-10-07 22:13:58,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 18:14:34] 2025-10-07 22:13:58,165 | INFO     | fitting pss+swap vs Time
[2025-10-07 18:14:34] 2025-10-07 22:13:58,165 | INFO     | sum of square deviations: 226022842.5
[2025-10-07 18:14:34] 2025-10-07 22:13:58,165 | INFO     | sum of deviations: -3677315185.4999995
[2025-10-07 18:14:34] 2025-10-07 22:13:58,165 | INFO     | mean x: 1759872360.5
[2025-10-07 18:14:34] 2025-10-07 22:13:58,165 | INFO     | mean y: 2327482.788888889
[2025-10-07 18:14:34] 2025-10-07 22:13:58,165 | INFO     | -- intersect: 28634855435.39341
[2025-10-07 18:14:34] 2025-10-07 22:13:58,166 | INFO     | intersect: 28634855435.39341
[2025-10-07 18:14:34] 2025-10-07 22:13:58,166 | INFO     | chi2: 0.004309866804130056
[2025-10-07 18:14:34] 2025-10-07 22:13:58,166 | INFO     | -- intersect: 28634855435.39341
[2025-10-07 18:14:34] 2025-10-07 22:13:58,166 | INFO     | current memory leak: -16.27 B/s (using 90 data points, chi2=0.00)
[2025-10-07 18:14:34] 2025-10-07 22:13:58,166 | INFO     | could have reported an average CPU frequency of 3803 MHz (7 samples)
[2025-10-07 18:14:34] 2025-10-07 22:13:58,166 | INFO     | ..............................
[2025-10-07 18:14:34] 2025-10-07 22:13:58,166 | INFO     | . Timing measurements:
[2025-10-07 18:14:34] 2025-10-07 22:13:58,166 | INFO     | . get job = 0 s
[2025-10-07 18:14:34] 2025-10-07 22:13:58,166 | INFO     | . initial setup = 2 s
[2025-10-07 18:14:34] 2025-10-07 22:13:58,166 | INFO     | . payload setup = 3 s
[2025-10-07 18:14:34] 2025-10-07 22:13:58,167 | INFO     | . stage-in = 0 s
[2025-10-07 18:14:34] 2025-10-07 22:13:58,167 | INFO     | . payload execution = 5890 s
[2025-10-07 18:14:34] 2025-10-07 22:13:58,167 | INFO     | . stage-out = 0 s
[2025-10-07 18:14:34] 2025-10-07 22:13:58,167 | INFO     | . log creation = 0 s
[2025-10-07 18:14:34] 2025-10-07 22:13:58,167 | INFO     | ..............................
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | 
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | job summary report
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | --------------------------------------------------
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | PanDA job id: 6833429862
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | task id: 46376905
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | errors: (none)
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | pilot state: finished 
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | transexitcode: 0
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | exeerrorcode: 0
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | exeerrordiag: 
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | exitcode: 0
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | exitmsg: OK
[2025-10-07 18:14:34] 2025-10-07 22:13:58,253 | INFO     | cpuconsumptiontime: 22809 s
[2025-10-07 18:14:34] 2025-10-07 22:13:58,254 | INFO     | nevents: 400
[2025-10-07 18:14:34] 2025-10-07 22:13:58,254 | INFO     | neventsw: 0
[2025-10-07 18:14:34] 2025-10-07 22:13:58,254 | INFO     | pid: 860579
[2025-10-07 18:14:34] 2025-10-07 22:13:58,254 | INFO     | pgrp: 860579
[2025-10-07 18:14:34] 2025-10-07 22:13:58,254 | INFO     | corecount: 4
[2025-10-07 18:14:34] 2025-10-07 22:13:58,254 | INFO     | event service: False
[2025-10-07 18:14:34] 2025-10-07 22:13:58,254 | INFO     | sizes: {0: 2348776, 1: 2348776, 4: 2349066, 11: 2349094, 5898: 2375932, 5899: 2384944, 5901: 2385128, 5905: 2385322}
[2025-10-07 18:14:34] 2025-10-07 22:13:58,254 | INFO     | --------------------------------------------------
[2025-10-07 18:14:34] 2025-10-07 22:13:58,254 | INFO     | 
[2025-10-07 18:14:34] 2025-10-07 22:13:58,254 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-10-07 18:14:34] 2025-10-07 22:13:58,268 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,270 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 18:14:34] 2025-10-07 22:13:58,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,270 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 18:14:34] 2025-10-07 22:13:58,270 | INFO     | job 6833429862 has completed (purged errors)
[2025-10-07 18:14:34] 2025-10-07 22:13:58,270 | INFO     | overall cleanup function is called
[2025-10-07 18:14:34] 2025-10-07 22:13:59,277 | INFO     | --- collectZombieJob: --- 10, [860579]
[2025-10-07 18:14:34] 2025-10-07 22:13:59,277 | INFO     | zombie collector waiting for pid 860579
[2025-10-07 18:14:34] 2025-10-07 22:13:59,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 18:14:34] 2025-10-07 22:13:59,277 | INFO     | collected zombie processes
[2025-10-07 18:14:34] 2025-10-07 22:13:59,277 | INFO     | will attempt to kill all subprocesses of pid=860579
[2025-10-07 18:14:34] 2025-10-07 22:13:59,427 | INFO     | process IDs to be killed: [860579] (in reverse order)
[2025-10-07 18:14:34] 2025-10-07 22:13:59,482 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 18:14:34] 2025-10-07 22:13:59,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 18:14:34] 2025-10-07 22:13:59,487 | INFO     | did not find any defunct processes belonging to 860579
[2025-10-07 18:14:34] 2025-10-07 22:13:59,491 | INFO     | did not find any defunct processes belonging to 860579
[2025-10-07 18:14:34] 2025-10-07 22:13:59,491 | INFO     | ready for new job
[2025-10-07 18:14:34] 2025-10-07 22:13:59,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 18:14:34] 2025-10-07 22:13:59,492 | INFO     | ***************************************
[2025-10-07 18:14:34] 2025-10-07 22:13:59,492 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 18:14:34] 2025-10-07 22:13:59,492 | INFO     | ***************************************
[2025-10-07 18:14:34] 2025-10-07 22:13:59,492 | INFO     | 
[2025-10-07 18:14:34] 2025-10-07 22:13:59,494 | INFO     | architecture information:
[2025-10-07 18:14:34] 2025-10-07 22:13:59,494 | INFO     | executing command: cat /etc/os-release
[2025-10-07 18:14:34] 2025-10-07 22:13:59,505 | INFO     | cat /etc/os-release:
[2025-10-07 18:14:34] NAME="CentOS Linux"
[2025-10-07 18:14:34] VERSION="7 (Core)"
[2025-10-07 18:14:34] ID="centos"
[2025-10-07 18:14:34] ID_LIKE="rhel fedora"
[2025-10-07 18:14:34] VERSION_ID="7"
[2025-10-07 18:14:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 18:14:34] ANSI_COLOR="0;31"
[2025-10-07 18:14:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 18:14:34] HOME_URL="https://www.centos.org/"
[2025-10-07 18:14:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 18:14:34] 
[2025-10-07 18:14:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 18:14:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 18:14:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 18:14:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 18:14:34] 
[2025-10-07 18:14:34] 2025-10-07 22:13:59,506 | INFO     | ***************************************
[2025-10-07 18:14:34] 2025-10-07 22:14:00,008 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-10-07 18:14:34] 2025-10-07 22:14:00,019 | INFO     | sufficient remaining disk space (413023600640 B)
[2025-10-07 18:14:34] 2025-10-07 22:14:00,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 18:14:34] 2025-10-07 22:14:00,019 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 18:14:34] 2025-10-07 22:14:00,019 | INFO     | update_server=False
[2025-10-07 18:14:34] 2025-10-07 22:14:00,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 18:14:34] 2025-10-07 22:14:00,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 18:14:34] 2025-10-07 22:14:00,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 18:14:34] 2025-10-07 22:14:00,020 | INFO     | aborting loop
[2025-10-07 18:14:34] 2025-10-07 22:14:00,042 | INFO     | all data control threads have been joined
[2025-10-07 18:14:34] 2025-10-07 22:14:00,618 | INFO     | all payload control threads have been joined
[2025-10-07 18:14:34] 2025-10-07 22:14:00,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 18:14:34] 2025-10-07 22:14:00,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 18:14:34] 2025-10-07 22:14:00,906 | INFO     | all job control threads have been joined
[2025-10-07 18:14:34] 2025-10-07 22:14:01,025 | INFO     | [job] retrieve thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:01,025 | INFO     | [job] queue monitor thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:01,025 | INFO     | [job] job monitor thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:01,046 | INFO     | [data] control thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:01,266 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:01,266 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:01,606 | INFO     | [data] copytool_in thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:01,622 | INFO     | [payload] control thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:01,890 | INFO     | [payload] failed_post thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:01,910 | INFO     | [job] control thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:02,102 | INFO     | [job] validate thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:02,394 | INFO     | [payload] validate_post thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:02,395 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:02,862 | INFO     | [data] copytool_out thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:04,718 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:10,990 | INFO     | job.realtimelogging is not enabled
[2025-10-07 18:14:34] 2025-10-07 22:14:11,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 18:14:34] 2025-10-07 22:14:28,710 | INFO     | [monitor] cgroup control has ended
[2025-10-07 18:14:34] 2025-10-07 22:14:29,390 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129641787041600)>', '<ExcThread(monitor, started 129641146730240)>']
[2025-10-07 18:14:34] 2025-10-07 22:14:30,584 | INFO     | PID=853775 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 18:14:34] 2025-10-07 22:14:30,584 | INFO     | .. there are 8 such processes running
[2025-10-07 18:14:34] 2025-10-07 22:14:30,584 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 18:14:34] 2025-10-07 22:14:30,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 18:14:34] 2025-10-07 22:14:30,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 18:14:34] 2025-10-07 22:14:30,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 18:14:34] 2025-10-07 22:14:30,585 | INFO     | [monitor] control thread has ended
[2025-10-07 18:14:34] 2025-10-07 22:14:34,414 | INFO     | all workflow threads have been joined
[2025-10-07 18:14:34] 2025-10-07 22:14:34,414 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 18:14:34] 2025-10-07 22:14:34,415 | INFO     | traces error code: 0
[2025-10-07 18:14:34] 2025-10-07 22:14:34,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 18:14:34] 2025-10-07 22:14:34,488 [wrapper] ==== pilot stdout END ====
[2025-10-07 18:14:34] 2025-10-07 22:14:34,490 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 18:14:34] 2025-10-07 22:14:34,492 [wrapper] pilotpid: 853775
[2025-10-07 18:14:34] 2025-10-07 22:14:34,494 [wrapper] Pilot exit status: 0
[2025-10-07 18:14:34] 2025-10-07 22:14:34,502 [wrapper] pandaids: 6833429862
[2025-10-07 18:14:34] 2025-10-07 22:14:34,536 [wrapper] cleanup supervisor_pilot 1013629 853776
[2025-10-07 18:14:34] 2025-10-07 22:14:34,538 [wrapper] Test setup, not cleaning
[2025-10-07 18:14:34] 2025-10-07 22:14:34,541 [wrapper] apfmon messages muted
[2025-10-07 18:14:34] 2025-10-07 22:14:34,543 [wrapper] ==== wrapper stdout END ====
[2025-10-07 18:14:34] 2025-10-07 22:14:34,545 [wrapper] ==== wrapper stderr END ====
[2025-10-07 18:14:34]  *** Error codes and diagnostics ***
[2025-10-07 18:14:34]     "exeErrorCode": 0,
[2025-10-07 18:14:34]     "exeErrorDiag": "",
[2025-10-07 18:14:34]     "pilotErrorCode": 0,
[2025-10-07 18:14:34]     "pilotErrorDiag": "",
[2025-10-07 18:14:34]  *** Listing of results directory ***
[2025-10-07 18:14:34] total 378980
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc    552446 Oct  7 06:41 pilot3.tar.gz
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc      5112 Oct  7 06:46 queuedata.json
[2025-10-07 18:14:34] -rwx------ 1 boinc boinc     36292 Oct  7 06:50 runpilot2-wrapper.sh
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc       100 Oct  7 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 18:14:34] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 16:35 run_atlas
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc       105 Oct  7 16:35 job.xml
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc      9449 Oct  7 16:35 init_data.xml
[2025-10-07 18:14:34] -rw-r--r-- 2 boinc boinc 211375634 Oct  7 16:35 EVNT.46376901._004954.pool.root.1
[2025-10-07 18:14:34] -rw-r--r-- 2 boinc boinc     15120 Oct  7 16:35 start_atlas.sh
[2025-10-07 18:14:34] drwxrwx--x 2 boinc boinc      4096 Oct  7 16:35 shared
[2025-10-07 18:14:34] -rw-r--r-- 2 boinc boinc    565601 Oct  7 16:35 input.tar.gz
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc         0 Oct  7 16:35 boinc_lockfile
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc      2520 Oct  7 16:35 pandaJob.out
[2025-10-07 18:14:34] -rw------- 1 boinc boinc    977520 Oct  7 16:35 agis_schedconf.cvmfs.json
[2025-10-07 18:14:34] -rw------- 1 boinc boinc   1560401 Oct  7 16:35 agis_ddmendpoints.agis.ALL.json
[2025-10-07 18:14:34] drwx------ 4 boinc boinc      4096 Oct  7 16:35 pilot3
[2025-10-07 18:14:34] -rw------- 1 boinc boinc 170508481 Oct  7 18:13 HITS.46376905._133009.pool.root.1
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc       530 Oct  7 18:13 boinc_task_state.xml
[2025-10-07 18:14:34] -rw------- 1 boinc boinc      1024 Oct  7 18:13 memory_monitor_summary.json
[2025-10-07 18:14:34] -rw------- 1 boinc boinc    279654 Oct  7 18:13 log.46376905._133009.job.log.tgz.1
[2025-10-07 18:14:34] -rw------- 1 boinc boinc      7746 Oct  7 18:13 heartbeat.json
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc        27 Oct  7 18:14 wrapper_checkpoint.txt
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc      8192 Oct  7 18:14 boinc_mmap_file
[2025-10-07 18:14:34] -rw------- 1 boinc boinc        95 Oct  7 18:14 pilot_heartbeat.json
[2025-10-07 18:14:34] -rw------- 1 boinc boinc      4902 Oct  7 18:14 pilotlog.txt
[2025-10-07 18:14:34] -rw------- 1 boinc boinc    867311 Oct  7 18:14 log.46376905._133009.job.log.1
[2025-10-07 18:14:34] -rw------- 1 boinc boinc       357 Oct  7 18:14 output.list
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc       620 Oct  7 18:14 runtime_log
[2025-10-07 18:14:34] -rw------- 1 boinc boinc   1167360 Oct  7 18:14 result.tar.gz
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc      8764 Oct  7 18:14 runtime_log.err
[2025-10-07 18:14:34] -rw------- 1 boinc boinc       643 Oct  7 18:14 ABWLDmNSKQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmloWNDmw5Hahn.diag
[2025-10-07 18:14:34] -rw-r--r-- 1 boinc boinc     21860 Oct  7 18:14 stderr.txt
[2025-10-07 18:14:34] HITS file was successfully produced:
[2025-10-07 18:14:34] -rw------- 1 boinc boinc 170508481 Oct  7 18:13 shared/HITS.pool.root.1
[2025-10-07 18:14:34]  *** Contents of shared directory: ***
[2025-10-07 18:14:34] total 374660
[2025-10-07 18:14:34] -rw-r--r-- 2 boinc boinc 211375634 Oct  7 16:35 ATLAS.root_0
[2025-10-07 18:14:34] -rw-r--r-- 2 boinc boinc     15120 Oct  7 16:35 start_atlas.sh
[2025-10-07 18:14:34] -rw-r--r-- 2 boinc boinc    565601 Oct  7 16:35 input.tar.gz
[2025-10-07 18:14:34] -rw------- 1 boinc boinc 170508481 Oct  7 18:13 HITS.pool.root.1
[2025-10-07 18:14:34] -rw------- 1 boinc boinc   1167360 Oct  7 18:14 result.tar.gz
18:14:36 (849941): run_atlas exited; CPU time 22893.308771
18:14:36 (849941): called boinc_finish(0)

</stderr_txt>
]]>

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