Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:33:20 (635529): wrapper (7.7.26015): starting
10:33:20 (635529): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 10:33:20] Arguments: --nthreads 8
[2025-10-07 10:33:20] Threads: 8
[2025-10-07 10:33:20] Checking for CVMFS
[2025-10-07 10:33:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 10:33:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 10:33:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 10:33:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 10:33:21] 2.13.2.0 558603 122187 488204 151438 1 604 29217491 32935936 22881 16776704 0 225518878 99.602 227437563 20035 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-07 10:33:21] CVMFS is ok
[2025-10-07 10:33:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 10:33:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 10:33:21] Further information can be found at the LHC@home message board.
[2025-10-07 10:33:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 10:33:21] Checking for apptainer binary...
[2025-10-07 10:33:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 10:33:21] Running /usr/bin/apptainer --version
[2025-10-07 10:33:21] apptainer version 1.4.2-1.el9
[2025-10-07 10:33:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 10:33:21] c6-6-8-3.aglt2.org
[2025-10-07 10:33:21] apptainer works
[2025-10-07 10:33:21] Set ATHENA_PROC_NUMBER=8
[2025-10-07 10:33:21] Set ATHENA_CORE_NUMBER=8
[2025-10-07 10:33:22] Starting ATLAS job with PandaID=6826053534
[2025-10-07 10:33:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 15:04:50]  *** The last 200 lines of the pilot log: ***
[2025-10-07 15:04:50] 2025-10-07 19:03:52,215 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 15:04:50] 2025-10-07 19:03:52,215 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 15:04:50] 2025-10-07 19:03:52,263 | INFO     | fitting pss+swap vs Time
[2025-10-07 15:04:50] 2025-10-07 19:03:52,263 | INFO     | sum of square deviations: 5705240223.939363
[2025-10-07 15:04:50] 2025-10-07 19:03:52,265 | INFO     | sum of deviations: 37916360371.63637
[2025-10-07 15:04:50] 2025-10-07 19:03:52,265 | INFO     | mean x: 1759855734.9848485
[2025-10-07 15:04:50] 2025-10-07 19:03:52,265 | INFO     | mean y: 2097613.659090909
[2025-10-07 15:04:50] 2025-10-07 19:03:52,265 | INFO     | -- intersect: -11693698116.341307
[2025-10-07 15:04:50] 2025-10-07 19:03:52,265 | INFO     | intersect: -11693698116.341307
[2025-10-07 15:04:50] 2025-10-07 19:03:52,284 | INFO     | chi2: 2.826912596003382
[2025-10-07 15:04:50] 2025-10-07 19:03:52,285 | INFO     | sum of square deviations: 5387176460.702696
[2025-10-07 15:04:50] 2025-10-07 19:03:52,287 | INFO     | sum of deviations: 56017648354.94598
[2025-10-07 15:04:50] 2025-10-07 19:03:52,287 | INFO     | mean x: 1759855582.4864864
[2025-10-07 15:04:50] 2025-10-07 19:03:52,287 | INFO     | mean y: 2106181.413127413
[2025-10-07 15:04:50] 2025-10-07 19:03:52,287 | INFO     | -- intersect: -18297456102.157883
[2025-10-07 15:04:50] 2025-10-07 19:03:52,287 | INFO     | intersect: -18297456102.157883
[2025-10-07 15:04:50] 2025-10-07 19:03:52,287 | INFO     | chi2: 1.9538722656167418
[2025-10-07 15:04:50] 2025-10-07 19:03:52,287 | INFO     | current chi2=1.9538722656167418 (change=30.88317380667951 %)
[2025-10-07 15:04:50] 2025-10-07 19:03:52,309 | INFO     | sum of square deviations: 5081158948.964604
[2025-10-07 15:04:50] 2025-10-07 19:03:52,311 | INFO     | sum of deviations: 54991176358.04337
[2025-10-07 15:04:50] 2025-10-07 19:03:52,311 | INFO     | mean x: 1759855429.988189
[2025-10-07 15:04:50] 2025-10-07 19:03:52,311 | INFO     | mean y: 2105664.681102362
[2025-10-07 15:04:50] 2025-10-07 19:03:52,311 | INFO     | -- intersect: -19044045279.85116
[2025-10-07 15:04:50] 2025-10-07 19:03:52,311 | INFO     | intersect: -19044045279.85116
[2025-10-07 15:04:50] 2025-10-07 19:03:52,312 | INFO     | chi2: 1.9529218689665095
[2025-10-07 15:04:50] 2025-10-07 19:03:52,312 | INFO     | current chi2=1.9529218689665095 (change=0.048641698178372356 %)
[2025-10-07 15:04:50] 2025-10-07 19:03:52,312 | INFO     | right removable region: 253
[2025-10-07 15:04:50] 2025-10-07 19:03:52,312 | INFO     | sum of square deviations: 5387130102.741324
[2025-10-07 15:04:50] 2025-10-07 19:03:52,334 | INFO     | sum of deviations: -5912401717.208492
[2025-10-07 15:04:50] 2025-10-07 19:03:52,334 | INFO     | mean x: 1759855887.4942086
[2025-10-07 15:04:50] 2025-10-07 19:03:52,335 | INFO     | mean y: 2118527.861003861
[2025-10-07 15:04:50] 2025-10-07 19:03:52,335 | INFO     | -- intersect: 1933568998.3008213
[2025-10-07 15:04:50] 2025-10-07 19:03:52,335 | INFO     | intersect: 1933568998.3008213
[2025-10-07 15:04:50] 2025-10-07 19:03:52,335 | INFO     | chi2: 1.1218462448233726
[2025-10-07 15:04:50] 2025-10-07 19:03:52,335 | INFO     | current chi2=1.1218462448233726 (change=60.315495908525406 %)
[2025-10-07 15:04:50] 2025-10-07 19:03:52,336 | INFO     | sum of square deviations: 5081066718.996103
[2025-10-07 15:04:50] 2025-10-07 19:03:52,358 | INFO     | sum of deviations: -17013625517.035439
[2025-10-07 15:04:50] 2025-10-07 19:03:52,359 | INFO     | mean x: 1759856040.003937
[2025-10-07 15:04:50] 2025-10-07 19:03:52,359 | INFO     | mean y: 2124054.0354330707
[2025-10-07 15:04:50] 2025-10-07 19:03:52,359 | INFO     | -- intersect: 5894888956.448611
[2025-10-07 15:04:50] 2025-10-07 19:03:52,359 | INFO     | intersect: 5894888956.448611
[2025-10-07 15:04:50] 2025-10-07 19:03:52,359 | INFO     | chi2: 1.027441831622052
[2025-10-07 15:04:50] 2025-10-07 19:03:52,359 | INFO     | current chi2=1.027441831622052 (change=8.4150937471992 %)
[2025-10-07 15:04:50] 2025-10-07 19:03:52,360 | INFO     | left removable region: 20
[2025-10-07 15:04:50] 2025-10-07 19:03:52,360 | INFO     | sum of square deviations: 3922119440.2403517
[2025-10-07 15:04:50] 2025-10-07 19:03:52,381 | INFO     | sum of deviations: 3032822231.1587944
[2025-10-07 15:04:50] 2025-10-07 19:03:52,381 | INFO     | mean x: 1759856009.4935622
[2025-10-07 15:04:50] 2025-10-07 19:03:52,381 | INFO     | mean y: 2132262.772532189
[2025-10-07 15:04:50] 2025-10-07 19:03:52,381 | INFO     | -- intersect: -1358695858.490241
[2025-10-07 15:04:50] 2025-10-07 19:03:52,381 | INFO     | intersect: -1358695858.490241
[2025-10-07 15:04:50] 2025-10-07 19:03:52,381 | INFO     | chi2: 0.12909486732220088
[2025-10-07 15:04:50] 2025-10-07 19:03:52,382 | INFO     | -- intersect: -1358695858.490241
[2025-10-07 15:04:50] 2025-10-07 19:03:52,382 | INFO     | current memory leak: 0.77 B/s (using 233 data points, chi2=0.13)
[2025-10-07 15:04:50] 2025-10-07 19:03:52,382 | INFO     | could have reported an average CPU frequency of 2700 MHz (12 samples)
[2025-10-07 15:04:50] 2025-10-07 19:03:52,382 | INFO     | ..............................
[2025-10-07 15:04:50] 2025-10-07 19:03:52,382 | INFO     | . Timing measurements:
[2025-10-07 15:04:50] 2025-10-07 19:03:52,383 | INFO     | . get job = 0 s
[2025-10-07 15:04:50] 2025-10-07 19:03:52,383 | INFO     | . initial setup = 3 s
[2025-10-07 15:04:50] 2025-10-07 19:03:52,383 | INFO     | . payload setup = 24 s
[2025-10-07 15:04:50] 2025-10-07 19:03:52,383 | INFO     | . stage-in = 0 s
[2025-10-07 15:04:50] 2025-10-07 19:03:52,383 | INFO     | . payload execution = 16096 s
[2025-10-07 15:04:50] 2025-10-07 19:03:52,383 | INFO     | . stage-out = 3 s
[2025-10-07 15:04:50] 2025-10-07 19:03:52,383 | INFO     | . log creation = 0 s
[2025-10-07 15:04:50] 2025-10-07 19:03:52,383 | INFO     | ..............................
[2025-10-07 15:04:50] 2025-10-07 19:03:52,430 | INFO     | time since job start (16197s) is within the limit (172800.0s)
[2025-10-07 15:04:50] 2025-10-07 19:03:52,621 | INFO     | 
[2025-10-07 15:04:50] 2025-10-07 19:03:52,621 | INFO     | job summary report
[2025-10-07 15:04:50] 2025-10-07 19:03:52,621 | INFO     | --------------------------------------------------
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | PanDA job id: 6826053534
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | task id: 46373048
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | errors: (none)
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | pilot state: finished 
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | transexitcode: 0
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | exeerrorcode: 0
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | exeerrordiag: 
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | exitcode: 0
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | exitmsg: OK
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | cpuconsumptiontime: 51289 s
[2025-10-07 15:04:50] 2025-10-07 19:03:52,626 | INFO     | nevents: 400
[2025-10-07 15:04:50] 2025-10-07 19:03:52,627 | INFO     | neventsw: 0
[2025-10-07 15:04:50] 2025-10-07 19:03:52,627 | INFO     | pid: 650283
[2025-10-07 15:04:50] 2025-10-07 19:03:52,627 | INFO     | pgrp: 650283
[2025-10-07 15:04:50] 2025-10-07 19:03:52,627 | INFO     | corecount: 8
[2025-10-07 15:04:50] 2025-10-07 19:03:52,627 | INFO     | event service: False
[2025-10-07 15:04:50] 2025-10-07 19:03:52,627 | INFO     | sizes: {0: 2348670, 1: 2348869, 12: 2348869, 15: 2349159, 23: 2349187, 16125: 2380604, 16130: 2389686, 16160: 2389824}
[2025-10-07 15:04:50] 2025-10-07 19:03:52,627 | INFO     | --------------------------------------------------
[2025-10-07 15:04:50] 2025-10-07 19:03:52,627 | INFO     | 
[2025-10-07 15:04:50] 2025-10-07 19:03:52,627 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-07 15:04:50] 2025-10-07 19:03:52,692 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,692 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,692 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,692 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 15:04:50] 2025-10-07 19:03:52,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,694 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 15:04:50] 2025-10-07 19:03:52,694 | INFO     | job 6826053534 has completed (purged errors)
[2025-10-07 15:04:50] 2025-10-07 19:03:52,694 | INFO     | overall cleanup function is called
[2025-10-07 15:04:50] 2025-10-07 19:03:53,704 | INFO     | --- collectZombieJob: --- 10, [650283]
[2025-10-07 15:04:50] 2025-10-07 19:03:53,704 | INFO     | zombie collector waiting for pid 650283
[2025-10-07 15:04:50] 2025-10-07 19:03:53,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 15:04:50] 2025-10-07 19:03:53,704 | INFO     | collected zombie processes
[2025-10-07 15:04:50] 2025-10-07 19:03:53,705 | INFO     | will attempt to kill all subprocesses of pid=650283
[2025-10-07 15:04:50] 2025-10-07 19:03:54,661 | INFO     | process IDs to be killed: [650283] (in reverse order)
[2025-10-07 15:04:50] 2025-10-07 19:03:54,846 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 15:04:50] 2025-10-07 19:03:54,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 15:04:50] 2025-10-07 19:03:54,886 | INFO     | did not find any defunct processes belonging to 650283
[2025-10-07 15:04:50] 2025-10-07 19:03:54,901 | INFO     | did not find any defunct processes belonging to 650283
[2025-10-07 15:04:50] 2025-10-07 19:03:54,901 | INFO     | ready for new job
[2025-10-07 15:04:50] 2025-10-07 19:03:54,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 15:04:50] 2025-10-07 19:03:54,903 | INFO     | ***************************************
[2025-10-07 15:04:50] 2025-10-07 19:03:54,903 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 15:04:50] 2025-10-07 19:03:54,903 | INFO     | ***************************************
[2025-10-07 15:04:50] 2025-10-07 19:03:54,903 | INFO     | 
[2025-10-07 15:04:50] 2025-10-07 19:03:54,926 | INFO     | architecture information:
[2025-10-07 15:04:50] 2025-10-07 19:03:54,929 | INFO     | executing command: cat /etc/os-release
[2025-10-07 15:04:50] 2025-10-07 19:03:55,017 | INFO     | cat /etc/os-release:
[2025-10-07 15:04:50] NAME="CentOS Linux"
[2025-10-07 15:04:50] VERSION="7 (Core)"
[2025-10-07 15:04:50] ID="centos"
[2025-10-07 15:04:50] ID_LIKE="rhel fedora"
[2025-10-07 15:04:50] VERSION_ID="7"
[2025-10-07 15:04:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 15:04:50] ANSI_COLOR="0;31"
[2025-10-07 15:04:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 15:04:50] HOME_URL="https://www.centos.org/"
[2025-10-07 15:04:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 15:04:50] 
[2025-10-07 15:04:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 15:04:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 15:04:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 15:04:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 15:04:50] 
[2025-10-07 15:04:50] 2025-10-07 19:03:55,017 | INFO     | ***************************************
[2025-10-07 15:04:50] 2025-10-07 19:03:55,521 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-07 15:04:50] 2025-10-07 19:03:55,568 | INFO     | sufficient remaining disk space (94339334144 B)
[2025-10-07 15:04:50] 2025-10-07 19:03:55,568 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 15:04:50] 2025-10-07 19:03:55,568 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 15:04:50] 2025-10-07 19:03:55,568 | INFO     | update_server=False
[2025-10-07 15:04:50] 2025-10-07 19:03:55,569 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 15:04:50] 2025-10-07 19:03:56,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 15:04:50] 2025-10-07 19:03:56,417 | INFO     | all data control threads have been joined
[2025-10-07 15:04:50] 2025-10-07 19:03:56,452 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 15:04:50] 2025-10-07 19:03:56,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:04:50] 2025-10-07 19:03:56,457 | INFO     | aborting loop
[2025-10-07 15:04:50] 2025-10-07 19:03:56,574 | INFO     | [job] retrieve thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:56,666 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:56,814 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:56,877 | INFO     | all payload control threads have been joined
[2025-10-07 15:04:50] 2025-10-07 19:03:57,095 | INFO     | [payload] failed_post thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:57,110 | INFO     | all job control threads have been joined
[2025-10-07 15:04:50] 2025-10-07 19:03:57,423 | INFO     | [data] control thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:57,463 | INFO     | [job] job monitor thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:57,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:04:50] 2025-10-07 19:03:57,723 | INFO     | [job] validate thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:57,723 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:57,761 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:57,761 | INFO     | [data] copytool_in thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:57,883 | INFO     | [payload] control thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:58,106 | INFO     | [payload] validate_post thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:58,118 | INFO     | [job] control thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:58,306 | INFO     | [data] copytool_out thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:03:58,673 | INFO     | [job] queue monitor thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:04:00,480 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 15:04:50] 2025-10-07 19:04:23,880 | INFO     | [monitor] cgroup control has ended
[2025-10-07 15:04:50] 2025-10-07 19:04:24,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139647328683840)>', '<ExcThread(monitor, started 139647055271680)>']
[2025-10-07 15:04:50] 2025-10-07 19:04:27,092 | INFO     | PID=640847 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 15:04:50] 2025-10-07 19:04:27,092 | INFO     | .. there are 23 such processes running
[2025-10-07 15:04:50] 2025-10-07 19:04:27,093 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 15:04:50] 2025-10-07 19:04:27,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 15:04:50] 2025-10-07 19:04:27,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 15:04:50] 2025-10-07 19:04:27,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 15:04:50] 2025-10-07 19:04:27,093 | INFO     | [monitor] control thread has ended
[2025-10-07 15:04:50] 2025-10-07 19:04:29,121 | INFO     | all workflow threads have been joined
[2025-10-07 15:04:50] 2025-10-07 19:04:29,122 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 15:04:50] 2025-10-07 19:04:29,122 | INFO     | traces error code: 0
[2025-10-07 15:04:50] 2025-10-07 19:04:29,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 15:04:50] 2025-10-07 19:04:29,324 [wrapper] ==== pilot stdout END ====
[2025-10-07 15:04:50] 2025-10-07 19:04:29,339 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 15:04:50] 2025-10-07 19:04:29,354 [wrapper] pilotpid: 640847
[2025-10-07 15:04:50] 2025-10-07 19:04:29,376 [wrapper] Pilot exit status: 0
[2025-10-07 15:04:50] 2025-10-07 19:04:29,588 [wrapper] pandaids: 6826053534
[2025-10-07 15:04:50] 2025-10-07 19:04:29,847 [wrapper] cleanup supervisor_pilot 1401277 640848
[2025-10-07 15:04:50] 2025-10-07 19:04:29,869 [wrapper] Test setup, not cleaning
[2025-10-07 15:04:50] 2025-10-07 19:04:29,872 [wrapper] apfmon messages muted
[2025-10-07 15:04:50] 2025-10-07 19:04:29,892 [wrapper] ==== wrapper stdout END ====
[2025-10-07 15:04:50] 2025-10-07 19:04:29,902 [wrapper] ==== wrapper stderr END ====
[2025-10-07 15:04:50]  *** Error codes and diagnostics ***
[2025-10-07 15:04:50]     "exeErrorCode": 0,
[2025-10-07 15:04:50]     "exeErrorDiag": "",
[2025-10-07 15:04:50]     "pilotErrorCode": 0,
[2025-10-07 15:04:50]     "pilotErrorDiag": "",
[2025-10-07 15:04:50]  *** Listing of results directory ***
[2025-10-07 15:04:50] total 416084
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas      5112 Sep 30 11:04 queuedata.json
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas    552446 Sep 30 11:06 pilot3.tar.gz
[2025-10-07 15:04:50] -rwx------. 1 boincer umatlas     36292 Sep 30 11:06 runpilot2-wrapper.sh
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas       100 Oct  7 10:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 15:04:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  7 10:33 run_atlas
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas       105 Oct  7 10:33 job.xml
[2025-10-07 15:04:50] -rw-r--r--. 2 boincer umatlas 222632776 Oct  7 10:33 EVNT.46373045._002030.pool.root.1
[2025-10-07 15:04:50] -rw-r--r--. 2 boincer umatlas    565605 Oct  7 10:33 input.tar.gz
[2025-10-07 15:04:50] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 10:33 start_atlas.sh
[2025-10-07 15:04:50] drwxrwx--x. 2 boincer umatlas      4096 Oct  7 10:33 shared
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas         0 Oct  7 10:33 boinc_lockfile
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas      2538 Oct  7 10:33 pandaJob.out
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas    976803 Oct  7 10:33 agis_schedconf.cvmfs.json
[2025-10-07 15:04:50] drwx------. 4 boincer umatlas      4096 Oct  7 10:33 pilot3
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas      6858 Oct  7 15:00 init_data.xml
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas 194507096 Oct  7 15:02 HITS.46373048._063515.pool.root.1
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas       531 Oct  7 15:02 boinc_task_state.xml
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas      1044 Oct  7 15:03 memory_monitor_summary.json
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas   1560401 Oct  7 15:03 agis_ddmendpoints.agis.ALL.json
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas    487532 Oct  7 15:03 log.46373048._063515.job.log.tgz.1
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas      7827 Oct  7 15:03 heartbeat.json
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas        95 Oct  7 15:04 pilot_heartbeat.json
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas      4823 Oct  7 15:04 pilotlog.txt
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas   2029485 Oct  7 15:04 log.46373048._063515.job.log.1
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas       357 Oct  7 15:04 output.list
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas       620 Oct  7 15:04 runtime_log
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas   2539520 Oct  7 15:04 result.tar.gz
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas       655 Oct  7 15:04 s1QLDmT7qN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWc8MDmULOOYo.diag
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas      8704 Oct  7 15:04 runtime_log.err
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas        28 Oct  7 15:04 wrapper_checkpoint.txt
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas      8192 Oct  7 15:04 boinc_mmap_file
[2025-10-07 15:04:50] -rw-r--r--. 1 boincer umatlas     20993 Oct  7 15:04 stderr.txt
[2025-10-07 15:04:50] HITS file was successfully produced:
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas 194507096 Oct  7 15:02 shared/HITS.pool.root.1
[2025-10-07 15:04:50]  *** Contents of shared directory: ***
[2025-10-07 15:04:50] total 410428
[2025-10-07 15:04:50] -rw-r--r--. 2 boincer umatlas 222632776 Oct  7 10:33 ATLAS.root_0
[2025-10-07 15:04:50] -rw-r--r--. 2 boincer umatlas    565605 Oct  7 10:33 input.tar.gz
[2025-10-07 15:04:50] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 10:33 start_atlas.sh
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas 194507096 Oct  7 15:02 HITS.pool.root.1
[2025-10-07 15:04:50] -rw-------. 1 boincer umatlas   2539520 Oct  7 15:04 result.tar.gz
15:04:52 (635529): run_atlas exited; CPU time 51928.185678
15:04:52 (635529): called boinc_finish(0)

</stderr_txt>
]]>

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