Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:20:27 (16536): wrapper (7.7.26015): starting
10:20:27 (16536): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 10:20:27] Arguments: --nthreads 8
[2025-10-07 10:20:27] Threads: 8
[2025-10-07 10:20:27] Checking for CVMFS
[2025-10-07 10:20:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 10:20:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 10:20:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 10:20:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 10:20:27] 2.11.2.0 2866 1411 67540 151438 0 56 17675459 20275200 1 130560 0 1086848 99.991 45211 35376 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 10:20:27] CVMFS is ok
[2025-10-07 10:20:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 10:20:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 10:20:27] Further information can be found at the LHC@home message board.
[2025-10-07 10:20:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 10:20:27] Checking for apptainer binary...
[2025-10-07 10:20:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 10:20:27] Running /usr/bin/apptainer --version
[2025-10-07 10:20:27] apptainer version 1.3.2-1.el7
[2025-10-07 10:20:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 10:20:29] c-204-35.aglt2.org
[2025-10-07 10:20:29] apptainer works
[2025-10-07 10:20:29] Set ATHENA_PROC_NUMBER=8
[2025-10-07 10:20:29] Set ATHENA_CORE_NUMBER=8
[2025-10-07 10:20:29] Starting ATLAS job with PandaID=6833168367
[2025-10-07 10:20:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 12:13:03]  *** The last 200 lines of the pilot log: ***
[2025-10-07 12:13:03] 2025-10-07 16:12:22,583 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 12:13:03] 2025-10-07 16:12:22,583 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 12:13:03] 2025-10-07 16:12:22,585 | INFO     | fitting pss+swap vs Time
[2025-10-07 12:13:03] 2025-10-07 16:12:22,586 | INFO     | sum of square deviations: 401533110.0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,586 | INFO     | sum of deviations: -2691350621.999999
[2025-10-07 12:13:03] 2025-10-07 16:12:22,586 | INFO     | mean x: 1759850172.0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,587 | INFO     | mean y: 2598769.972477064
[2025-10-07 12:13:03] 2025-10-07 16:12:22,587 | INFO     | -- intersect: 11798323050.440918
[2025-10-07 12:13:03] 2025-10-07 16:12:22,587 | INFO     | intersect: 11798323050.440918
[2025-10-07 12:13:03] 2025-10-07 16:12:22,587 | INFO     | chi2: 1.606425605262074
[2025-10-07 12:13:03] 2025-10-07 16:12:22,587 | INFO     | sum of square deviations: 348769330.0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,588 | INFO     | sum of deviations: -1423438629.5000014
[2025-10-07 12:13:03] 2025-10-07 16:12:22,588 | INFO     | mean x: 1759850019.5
[2025-10-07 12:13:03] 2025-10-07 16:12:22,588 | INFO     | mean y: 2602437.1634615385
[2025-10-07 12:13:03] 2025-10-07 16:12:22,588 | INFO     | -- intersect: 7185110428.570363
[2025-10-07 12:13:03] 2025-10-07 16:12:22,588 | INFO     | intersect: 7185110428.570363
[2025-10-07 12:13:03] 2025-10-07 16:12:22,589 | INFO     | chi2: 1.6092026488371949
[2025-10-07 12:13:03] 2025-10-07 16:12:22,589 | INFO     | current chi2=1.6092026488371949 (change=-0.17287097304875346 %)
[2025-10-07 12:13:03] 2025-10-07 16:12:22,589 | INFO     | right removable region: 103
[2025-10-07 12:13:03] 2025-10-07 16:12:22,589 | INFO     | sum of square deviations: 348769330.0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,590 | INFO     | sum of deviations: -19220241119.999996
[2025-10-07 12:13:03] 2025-10-07 16:12:22,590 | INFO     | mean x: 1759850324.5
[2025-10-07 12:13:03] 2025-10-07 16:12:22,590 | INFO     | mean y: 2645563.6923076925
[2025-10-07 12:13:03] 2025-10-07 16:12:22,590 | INFO     | -- intersect: 96985793628.91994
[2025-10-07 12:13:03] 2025-10-07 16:12:22,590 | INFO     | intersect: 96985793628.91994
[2025-10-07 12:13:03] 2025-10-07 16:12:22,590 | INFO     | chi2: 0.1437774270948157
[2025-10-07 12:13:03] 2025-10-07 16:12:22,591 | INFO     | current chi2=0.1437774270948157 (change=91.04985461985588 %)
[2025-10-07 12:13:03] 2025-10-07 16:12:22,591 | INFO     | sum of square deviations: 300842850.0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,591 | INFO     | sum of deviations: -20608648944.000004
[2025-10-07 12:13:03] 2025-10-07 16:12:22,591 | INFO     | mean x: 1759850477.0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,591 | INFO     | mean y: 2649813.6363636362
[2025-10-07 12:13:03] 2025-10-07 16:12:22,592 | INFO     | -- intersect: 120557752500.71686
[2025-10-07 12:13:03] 2025-10-07 16:12:22,592 | INFO     | intersect: 120557752500.71686
[2025-10-07 12:13:03] 2025-10-07 16:12:22,592 | INFO     | chi2: 0.0808409835431155
[2025-10-07 12:13:03] 2025-10-07 16:12:22,592 | INFO     | current chi2=0.0808409835431155 (change=43.77352191049852 %)
[2025-10-07 12:13:03] 2025-10-07 16:12:22,592 | INFO     | sum of square deviations: 257521107.5
[2025-10-07 12:13:03] 2025-10-07 16:12:22,593 | INFO     | sum of deviations: -18758291048.000004
[2025-10-07 12:13:03] 2025-10-07 16:12:22,593 | INFO     | mean x: 1759850629.5
[2025-10-07 12:13:03] 2025-10-07 16:12:22,593 | INFO     | mean y: 2643275.7021276597
[2025-10-07 12:13:03] 2025-10-07 16:12:22,593 | INFO     | -- intersect: 128193262792.84995
[2025-10-07 12:13:03] 2025-10-07 16:12:22,593 | INFO     | intersect: 128193262792.84995
[2025-10-07 12:13:03] 2025-10-07 16:12:22,593 | INFO     | chi2: 0.07659421969696925
[2025-10-07 12:13:03] 2025-10-07 16:12:22,594 | INFO     | current chi2=0.07659421969696925 (change=5.253231294348731 %)
[2025-10-07 12:13:03] 2025-10-07 16:12:22,594 | INFO     | left removable region: 30
[2025-10-07 12:13:03] 2025-10-07 16:12:22,594 | INFO     | sum of square deviations: 120605052.0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,594 | INFO     | sum of deviations: -10580091563.999998
[2025-10-07 12:13:03] 2025-10-07 16:12:22,594 | INFO     | mean x: 1759850904.0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,594 | INFO     | mean y: 2620326.328767123
[2025-10-07 12:13:03] 2025-10-07 16:12:22,595 | INFO     | -- intersect: 154385736079.29214
[2025-10-07 12:13:03] 2025-10-07 16:12:22,595 | INFO     | intersect: 154385736079.29214
[2025-10-07 12:13:03] 2025-10-07 16:12:22,595 | INFO     | chi2: 0.06680945363939546
[2025-10-07 12:13:03] 2025-10-07 16:12:22,595 | INFO     | -- intersect: 154385736079.29214
[2025-10-07 12:13:03] 2025-10-07 16:12:22,595 | INFO     | current memory leak: -87.73 B/s (using 73 data points, chi2=0.07)
[2025-10-07 12:13:03] 2025-10-07 16:12:22,596 | INFO     | could have reported an average CPU frequency of 1955 MHz (7 samples)
[2025-10-07 12:13:03] 2025-10-07 16:12:22,596 | INFO     | ..............................
[2025-10-07 12:13:03] 2025-10-07 16:12:22,596 | INFO     | . Timing measurements:
[2025-10-07 12:13:03] 2025-10-07 16:12:22,596 | INFO     | . get job = 0 s
[2025-10-07 12:13:03] 2025-10-07 16:12:22,596 | INFO     | . initial setup = 2 s
[2025-10-07 12:13:03] 2025-10-07 16:12:22,596 | INFO     | . payload setup = 8 s
[2025-10-07 12:13:03] 2025-10-07 16:12:22,596 | INFO     | . stage-in = 0 s
[2025-10-07 12:13:03] 2025-10-07 16:12:22,596 | INFO     | . payload execution = 6652 s
[2025-10-07 12:13:03] 2025-10-07 16:12:22,597 | INFO     | . stage-out = 0 s
[2025-10-07 12:13:03] 2025-10-07 16:12:22,597 | INFO     | . log creation = 0 s
[2025-10-07 12:13:03] 2025-10-07 16:12:22,597 | INFO     | ..............................
[2025-10-07 12:13:03] 2025-10-07 16:12:22,688 | INFO     | 
[2025-10-07 12:13:03] 2025-10-07 16:12:22,688 | INFO     | job summary report
[2025-10-07 12:13:03] 2025-10-07 16:12:22,688 | INFO     | --------------------------------------------------
[2025-10-07 12:13:03] 2025-10-07 16:12:22,688 | INFO     | PanDA job id: 6833168367
[2025-10-07 12:13:03] 2025-10-07 16:12:22,689 | INFO     | task id: 46376905
[2025-10-07 12:13:03] 2025-10-07 16:12:22,689 | INFO     | errors: (none)
[2025-10-07 12:13:03] 2025-10-07 16:12:22,689 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 12:13:03] 2025-10-07 16:12:22,689 | INFO     | pilot state: finished 
[2025-10-07 12:13:03] 2025-10-07 16:12:22,689 | INFO     | transexitcode: 0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,689 | INFO     | exeerrorcode: 0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,689 | INFO     | exeerrordiag: 
[2025-10-07 12:13:03] 2025-10-07 16:12:22,690 | INFO     | exitcode: 0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,690 | INFO     | exitmsg: OK
[2025-10-07 12:13:03] 2025-10-07 16:12:22,690 | INFO     | cpuconsumptiontime: 48074 s
[2025-10-07 12:13:03] 2025-10-07 16:12:22,690 | INFO     | nevents: 400
[2025-10-07 12:13:03] 2025-10-07 16:12:22,690 | INFO     | neventsw: 0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,690 | INFO     | pid: 26818
[2025-10-07 12:13:03] 2025-10-07 16:12:22,690 | INFO     | pgrp: 26818
[2025-10-07 12:13:03] 2025-10-07 16:12:22,691 | INFO     | corecount: 8
[2025-10-07 12:13:03] 2025-10-07 16:12:22,691 | INFO     | event service: False
[2025-10-07 12:13:03] 2025-10-07 16:12:22,691 | INFO     | sizes: {0: 2348649, 1: 2348848, 6: 2349110, 11: 2349138, 6664: 2376217, 6666: 2385215, 6669: 2385399, 6679: 2385593}
[2025-10-07 12:13:03] 2025-10-07 16:12:22,691 | INFO     | --------------------------------------------------
[2025-10-07 12:13:03] 2025-10-07 16:12:22,692 | INFO     | 
[2025-10-07 12:13:03] 2025-10-07 16:12:22,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 12:13:03] 2025-10-07 16:12:22,718 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,718 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,719 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,719 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,719 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,720 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,721 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 12:13:03] 2025-10-07 16:12:22,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,721 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 12:13:03] 2025-10-07 16:12:22,722 | INFO     | job 6833168367 has completed (purged errors)
[2025-10-07 12:13:03] 2025-10-07 16:12:22,722 | INFO     | overall cleanup function is called
[2025-10-07 12:13:03] 2025-10-07 16:12:22,815 | INFO     | PID=20326 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 12:13:03] 2025-10-07 16:12:23,731 | INFO     | --- collectZombieJob: --- 10, [26818]
[2025-10-07 12:13:03] 2025-10-07 16:12:23,731 | INFO     | zombie collector waiting for pid 26818
[2025-10-07 12:13:03] 2025-10-07 16:12:23,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 12:13:03] 2025-10-07 16:12:23,732 | INFO     | collected zombie processes
[2025-10-07 12:13:03] 2025-10-07 16:12:23,732 | INFO     | will attempt to kill all subprocesses of pid=26818
[2025-10-07 12:13:03] 2025-10-07 16:12:23,817 | INFO     | process IDs to be killed: [26818] (in reverse order)
[2025-10-07 12:13:03] 2025-10-07 16:12:23,874 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 12:13:03] 2025-10-07 16:12:23,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 12:13:03] 2025-10-07 16:12:23,879 | INFO     | did not find any defunct processes belonging to 26818
[2025-10-07 12:13:03] 2025-10-07 16:12:23,883 | INFO     | did not find any defunct processes belonging to 26818
[2025-10-07 12:13:03] 2025-10-07 16:12:23,883 | INFO     | ready for new job
[2025-10-07 12:13:03] 2025-10-07 16:12:23,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 12:13:03] 2025-10-07 16:12:23,884 | INFO     | ***************************************
[2025-10-07 12:13:03] 2025-10-07 16:12:23,885 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 12:13:03] 2025-10-07 16:12:23,885 | INFO     | ***************************************
[2025-10-07 12:13:03] 2025-10-07 16:12:23,885 | INFO     | 
[2025-10-07 12:13:03] 2025-10-07 16:12:23,885 | INFO     | architecture information:
[2025-10-07 12:13:03] 2025-10-07 16:12:23,886 | INFO     | executing command: cat /etc/os-release
[2025-10-07 12:13:03] 2025-10-07 16:12:23,905 | INFO     | cat /etc/os-release:
[2025-10-07 12:13:03] NAME="CentOS Linux"
[2025-10-07 12:13:03] VERSION="7 (Core)"
[2025-10-07 12:13:03] ID="centos"
[2025-10-07 12:13:03] ID_LIKE="rhel fedora"
[2025-10-07 12:13:03] VERSION_ID="7"
[2025-10-07 12:13:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 12:13:03] ANSI_COLOR="0;31"
[2025-10-07 12:13:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 12:13:03] HOME_URL="https://www.centos.org/"
[2025-10-07 12:13:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 12:13:03] 
[2025-10-07 12:13:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 12:13:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 12:13:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 12:13:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 12:13:03] 
[2025-10-07 12:13:03] 2025-10-07 16:12:23,906 | INFO     | ***************************************
[2025-10-07 12:13:03] 2025-10-07 16:12:24,409 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 12:13:03] 2025-10-07 16:12:24,430 | INFO     | sufficient remaining disk space (18589155328 B)
[2025-10-07 12:13:03] 2025-10-07 16:12:24,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 12:13:03] 2025-10-07 16:12:24,431 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 12:13:03] 2025-10-07 16:12:24,431 | INFO     | update_server=False
[2025-10-07 12:13:03] 2025-10-07 16:12:24,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 12:13:03] 2025-10-07 16:12:24,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 12:13:03] 2025-10-07 16:12:24,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 12:13:03] 2025-10-07 16:12:25,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 12:13:03] 2025-10-07 16:12:25,082 | INFO     | all data control threads have been joined
[2025-10-07 12:13:03] 2025-10-07 16:12:25,159 | INFO     | all job control threads have been joined
[2025-10-07 12:13:03] 2025-10-07 16:12:25,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 12:13:03] 2025-10-07 16:12:25,184 | INFO     | aborting loop
[2025-10-07 12:13:03] 2025-10-07 16:12:25,435 | INFO     | [job] retrieve thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:25,437 | INFO     | [job] queue monitor thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:25,702 | INFO     | all payload control threads have been joined
[2025-10-07 12:13:03] 2025-10-07 16:12:26,027 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,030 | INFO     | [payload] failed_post thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,085 | INFO     | [data] control thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,162 | INFO     | [job] control thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,189 | INFO     | [job] job monitor thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,392 | INFO     | [data] copytool_in thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,398 | INFO     | [job] validate thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,410 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,565 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,620 | INFO     | [payload] validate_post thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,703 | INFO     | [payload] control thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:26,726 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:27,039 | INFO     | [data] copytool_out thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:28,438 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 12:13:03] 2025-10-07 16:12:53,902 | INFO     | 6699s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-07 12:13:03] 2025-10-07 16:12:55,023 | INFO     | PID=20326 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 12:13:03] 2025-10-07 16:12:55,024 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 12:13:03] 2025-10-07 16:12:55,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 12:13:03] 2025-10-07 16:12:55,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 12:13:03] 2025-10-07 16:12:57,182 | INFO     | [monitor] cgroup control has ended
[2025-10-07 12:13:03] 2025-10-07 16:12:57,815 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135169492800)>', '<ExcThread(monitor, started 140134498424576)>']
[2025-10-07 12:13:03] 2025-10-07 16:12:58,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 12:13:03] 2025-10-07 16:12:58,037 | INFO     | [monitor] control thread has ended
[2025-10-07 12:13:03] 2025-10-07 16:13:02,838 | INFO     | all workflow threads have been joined
[2025-10-07 12:13:03] 2025-10-07 16:13:02,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 12:13:03] 2025-10-07 16:13:02,839 | INFO     | traces error code: 0
[2025-10-07 12:13:03] 2025-10-07 16:13:02,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 12:13:03] 2025-10-07 16:13:02,936 [wrapper] ==== pilot stdout END ====
[2025-10-07 12:13:03] 2025-10-07 16:13:02,941 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 12:13:03] 2025-10-07 16:13:02,946 [wrapper] pilotpid: 20326
[2025-10-07 12:13:03] 2025-10-07 16:13:02,951 [wrapper] Pilot exit status: 0
[2025-10-07 12:13:03] 2025-10-07 16:13:02,969 [wrapper] pandaids: 6833168367
[2025-10-07 12:13:03] 2025-10-07 16:13:03,022 [wrapper] cleanup supervisor_pilot  7485 20327
[2025-10-07 12:13:03] 2025-10-07 16:13:03,026 [wrapper] Test setup, not cleaning
[2025-10-07 12:13:03] 2025-10-07 16:13:03,030 [wrapper] apfmon messages muted
[2025-10-07 12:13:03] 2025-10-07 16:13:03,035 [wrapper] ==== wrapper stdout END ====
[2025-10-07 12:13:03] 2025-10-07 16:13:03,039 [wrapper] ==== wrapper stderr END ====
[2025-10-07 12:13:03]  *** Error codes and diagnostics ***
[2025-10-07 12:13:03]     "exeErrorCode": 0,
[2025-10-07 12:13:03]     "exeErrorDiag": "",
[2025-10-07 12:13:03]     "pilotErrorCode": 0,
[2025-10-07 12:13:03]     "pilotErrorDiag": "",
[2025-10-07 12:13:03]  *** Listing of results directory ***
[2025-10-07 12:13:03] total 387812
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas      5112 Oct  7 00:30 queuedata.json
[2025-10-07 12:13:03] -rwx------ 1 boincer umatlas     36292 Oct  7 00:31 runpilot2-wrapper.sh
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas    552446 Oct  7 00:31 pilot3.tar.gz
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas       100 Oct  7 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 12:13:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct  7 10:20 run_atlas
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas       105 Oct  7 10:20 job.xml
[2025-10-07 12:13:03] -rw-r--r-- 2 boincer umatlas 212592568 Oct  7 10:20 EVNT.46376901._004764.pool.root.1
[2025-10-07 12:13:03] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 10:20 start_atlas.sh
[2025-10-07 12:13:03] drwxrwx--x 2 boincer umatlas      4096 Oct  7 10:20 shared
[2025-10-07 12:13:03] -rw-r--r-- 2 boincer umatlas    565601 Oct  7 10:20 input.tar.gz
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas         0 Oct  7 10:20 boinc_lockfile
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas      2521 Oct  7 10:20 pandaJob.out
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas    976803 Oct  7 10:20 agis_schedconf.cvmfs.json
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas   1560401 Oct  7 10:20 agis_ddmendpoints.agis.ALL.json
[2025-10-07 12:13:03] drwx------ 4 boincer umatlas      4096 Oct  7 10:20 pilot3
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas      5909 Oct  7 12:10 init_data.xml
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas 178033450 Oct  7 12:11 HITS.46376905._128052.pool.root.1
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas      1049 Oct  7 12:12 memory_monitor_summary.json
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas       529 Oct  7 12:12 boinc_task_state.xml
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas    357103 Oct  7 12:12 log.46376905._128052.job.log.tgz.1
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas        95 Oct  7 12:12 pilot_heartbeat.json
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas      7853 Oct  7 12:12 heartbeat.json
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas      8192 Oct  7 12:12 boinc_mmap_file
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas        27 Oct  7 12:12 wrapper_checkpoint.txt
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas      4861 Oct  7 12:13 pilotlog.txt
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas    942852 Oct  7 12:13 log.46376905._128052.job.log.1
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas       357 Oct  7 12:13 output.list
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas       620 Oct  7 12:13 runtime_log
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas   1320960 Oct  7 12:13 result.tar.gz
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas       658 Oct  7 12:13 WnMNDmaXEQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmb5VNDm4KN1Vm.diag
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas      8703 Oct  7 12:13 runtime_log.err
[2025-10-07 12:13:03] -rw-r--r-- 1 boincer umatlas     21036 Oct  7 12:13 stderr.txt
[2025-10-07 12:13:03] HITS file was successfully produced:
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas 178033450 Oct  7 12:11 shared/HITS.pool.root.1
[2025-10-07 12:13:03]  *** Contents of shared directory: ***
[2025-10-07 12:13:03] total 383344
[2025-10-07 12:13:03] -rw-r--r-- 2 boincer umatlas 212592568 Oct  7 10:20 ATLAS.root_0
[2025-10-07 12:13:03] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 10:20 start_atlas.sh
[2025-10-07 12:13:03] -rw-r--r-- 2 boincer umatlas    565601 Oct  7 10:20 input.tar.gz
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas 178033450 Oct  7 12:11 HITS.pool.root.1
[2025-10-07 12:13:03] -rw------- 1 boincer umatlas   1320960 Oct  7 12:13 result.tar.gz
12:13:05 (16536): run_atlas exited; CPU time 48097.542048
12:13:05 (16536): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN