Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:24:11 (46958): wrapper (7.7.26015): starting
11:24:11 (46958): wrapper: running run_atlas (--nthreads 9)
[2025-10-07 11:24:11] Arguments: --nthreads 9
[2025-10-07 11:24:11] Threads: 9
[2025-10-07 11:24:11] Checking for CVMFS
[2025-10-07 11:24:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 11:24:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 11:24:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 11:24:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 11:24:12] 2.13.2.0 2935877 116925 556616 151440 3 152 21705810 40960001 38859 16776704 0 511870779 99.768 316450218 17675 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-07 11:24:12] CVMFS is ok
[2025-10-07 11:24:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 11:24:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 11:24:12] Further information can be found at the LHC@home message board.
[2025-10-07 11:24:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 11:24:12] Checking for apptainer binary...
[2025-10-07 11:24:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 11:24:12] Running /usr/bin/apptainer --version
[2025-10-07 11:24:12] apptainer version 1.4.2-1.el9
[2025-10-07 11:24:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 11:24:12] c7-2-17.aglt2.org
[2025-10-07 11:24:12] apptainer works
[2025-10-07 11:24:12] Set ATHENA_PROC_NUMBER=9
[2025-10-07 11:24:12] Set ATHENA_CORE_NUMBER=9
[2025-10-07 11:24:12] Starting ATLAS job with PandaID=6833168419
[2025-10-07 11:24:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:09:36 (1854862): wrapper (7.7.26015): starting
13:09:36 (1854862): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 13:09:36] Arguments: --nthreads 8
[2025-10-07 13:09:36] Threads: 8
[2025-10-07 13:09:36] This job has been restarted, cleaning up previous attempt
[2025-10-07 13:09:36] Checking for CVMFS
[2025-10-07 13:09:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 13:09:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 13:09:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 13:09:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 13:09:38] 2.13.2.0 2935877 117031 588436 151441 1 806 28977120 40960000 35115 16776704 0 513314287 99.767 318804616 17624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-07 13:09:38] CVMFS is ok
[2025-10-07 13:09:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 13:09:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 13:09:38] Further information can be found at the LHC@home message board.
[2025-10-07 13:09:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 13:09:38] Checking for apptainer binary...
[2025-10-07 13:09:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 13:09:38] Running /usr/bin/apptainer --version
[2025-10-07 13:09:38] apptainer version 1.4.2-1.el9
[2025-10-07 13:09:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 13:09:38] c7-2-17.aglt2.org
[2025-10-07 13:09:38] apptainer works
[2025-10-07 13:09:38] Set ATHENA_PROC_NUMBER=8
[2025-10-07 13:09:38] Set ATHENA_CORE_NUMBER=8
[2025-10-07 13:09:38] Starting ATLAS job with PandaID=6833168419
[2025-10-07 13:09:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 15:04:10]  *** The last 200 lines of the pilot log: ***
[2025-10-07 15:04:10] 2025-10-07 18:52:50,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 15:04:10] 2025-10-07 18:52:50,290 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 15:04:10] 2025-10-07 18:52:50,315 | INFO     | fitting pss+swap vs Time
[2025-10-07 15:04:10] 2025-10-07 18:52:50,315 | INFO     | sum of square deviations: 319438579.96039516
[2025-10-07 15:04:10] 2025-10-07 18:52:50,315 | INFO     | sum of deviations: 10684596937.009897
[2025-10-07 15:04:10] 2025-10-07 18:52:50,315 | INFO     | mean x: 1759860091.019802
[2025-10-07 15:04:10] 2025-10-07 18:52:50,315 | INFO     | mean y: 2227066.495049505
[2025-10-07 15:04:10] 2025-10-07 18:52:50,316 | INFO     | -- intersect: -58861657628.9836
[2025-10-07 15:04:10] 2025-10-07 18:52:50,316 | INFO     | intersect: -58861657628.9836
[2025-10-07 15:04:10] 2025-10-07 18:52:50,316 | INFO     | chi2: 2.1999997961254216
[2025-10-07 15:04:10] 2025-10-07 18:52:50,316 | INFO     | sum of square deviations: 274303459.9583326
[2025-10-07 15:04:10] 2025-10-07 18:52:50,316 | INFO     | sum of deviations: 15876539944.08334
[2025-10-07 15:04:10] 2025-10-07 18:52:50,316 | INFO     | mean x: 1759859938.5208333
[2025-10-07 15:04:10] 2025-10-07 18:52:50,316 | INFO     | mean y: 2243817.4583333335
[2025-10-07 15:04:10] 2025-10-07 18:52:50,317 | INFO     | -- intersect: -101857523515.26979
[2025-10-07 15:04:10] 2025-10-07 18:52:50,317 | INFO     | intersect: -101857523515.26979
[2025-10-07 15:04:10] 2025-10-07 18:52:50,317 | INFO     | chi2: 1.5202243741748118
[2025-10-07 15:04:10] 2025-10-07 18:52:50,317 | INFO     | current chi2=1.5202243741748118 (change=30.898885679344666 %)
[2025-10-07 15:04:10] 2025-10-07 18:52:50,333 | INFO     | sum of square deviations: 233633539.95604375
[2025-10-07 15:04:10] 2025-10-07 18:52:50,334 | INFO     | sum of deviations: 14992861716.824171
[2025-10-07 15:04:10] 2025-10-07 18:52:50,334 | INFO     | mean x: 1759859786.0219781
[2025-10-07 15:04:10] 2025-10-07 18:52:50,334 | INFO     | mean y: 2240533.087912088
[2025-10-07 15:04:10] 2025-10-07 18:52:50,334 | INFO     | -- intersect: -112932462325.8915
[2025-10-07 15:04:10] 2025-10-07 18:52:50,334 | INFO     | intersect: -112932462325.8915
[2025-10-07 15:04:10] 2025-10-07 18:52:50,334 | INFO     | chi2: 1.521120793832862
[2025-10-07 15:04:10] 2025-10-07 18:52:50,334 | INFO     | current chi2=1.521120793832862 (change=-0.05896627322112756 %)
[2025-10-07 15:04:10] 2025-10-07 18:52:50,334 | INFO     | right removable region: 90
[2025-10-07 15:04:10] 2025-10-07 18:52:50,334 | INFO     | sum of square deviations: 274302239.9583326
[2025-10-07 15:04:10] 2025-10-07 18:52:50,335 | INFO     | sum of deviations: -3338650999.979166
[2025-10-07 15:04:10] 2025-10-07 18:52:50,335 | INFO     | mean x: 1759860243.5208333
[2025-10-07 15:04:10] 2025-10-07 18:52:50,335 | INFO     | mean y: 2273363.7395833335
[2025-10-07 15:04:10] 2025-10-07 18:52:50,335 | INFO     | -- intersect: 21422292255.116207
[2025-10-07 15:04:10] 2025-10-07 18:52:50,335 | INFO     | intersect: 21422292255.116207
[2025-10-07 15:04:10] 2025-10-07 18:52:50,335 | INFO     | chi2: 0.7170738596720343
[2025-10-07 15:04:10] 2025-10-07 18:52:50,335 | INFO     | current chi2=0.7170738596720343 (change=67.40573063075166 %)
[2025-10-07 15:04:10] 2025-10-07 18:52:50,335 | INFO     | sum of square deviations: 233631099.95604375
[2025-10-07 15:04:10] 2025-10-07 18:52:50,335 | INFO     | sum of deviations: -3726924591.4175835
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | mean x: 1759860396.0219781
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | mean y: 2274777.208791209
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | -- intersect: 28075878799.234142
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | intersect: 28075878799.234142
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | chi2: 0.716268872113089
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | current chi2=0.716268872113089 (change=0.11226006192911399 %)
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | left removable region: 20
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | sum of square deviations: 106336877.5
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | sum of deviations: 602143749.0
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | mean x: 1759860365.5
[2025-10-07 15:04:10] 2025-10-07 18:52:50,336 | INFO     | mean y: 2300314.8857142855
[2025-10-07 15:04:10] 2025-10-07 18:52:50,337 | INFO     | -- intersect: -9963094034.771397
[2025-10-07 15:04:10] 2025-10-07 18:52:50,337 | INFO     | intersect: -9963094034.771397
[2025-10-07 15:04:10] 2025-10-07 18:52:50,337 | INFO     | chi2: 0.004059862395818983
[2025-10-07 15:04:10] 2025-10-07 18:52:50,337 | INFO     | -- intersect: -9963094034.771397
[2025-10-07 15:04:10] 2025-10-07 18:52:50,337 | INFO     | current memory leak: 5.66 B/s (using 70 data points, chi2=0.00)
[2025-10-07 15:04:10] 2025-10-07 18:52:50,348 | INFO     | could have reported an average CPU frequency of 3367 MHz (7 samples)
[2025-10-07 15:04:10] 2025-10-07 18:52:50,348 | INFO     | ..............................
[2025-10-07 15:04:10] 2025-10-07 18:52:50,348 | INFO     | . Timing measurements:
[2025-10-07 15:04:10] 2025-10-07 18:52:50,348 | INFO     | . get job = 0 s
[2025-10-07 15:04:10] 2025-10-07 18:52:50,348 | INFO     | . initial setup = 1 s
[2025-10-07 15:04:10] 2025-10-07 18:52:50,348 | INFO     | . payload setup = 10 s
[2025-10-07 15:04:10] 2025-10-07 18:52:50,348 | INFO     | . stage-in = 0 s
[2025-10-07 15:04:10] 2025-10-07 18:52:50,348 | INFO     | . payload execution = 6118 s
[2025-10-07 15:04:10] 2025-10-07 18:52:50,348 | INFO     | . stage-out = 4 s
[2025-10-07 15:04:10] 2025-10-07 18:52:50,349 | INFO     | . log creation = 0 s
[2025-10-07 15:04:10] 2025-10-07 18:52:50,349 | INFO     | ..............................
[2025-10-07 15:04:10] 2025-10-07 18:52:50,884 | INFO     | time since job start (6175s) is within the limit (172800.0s)
[2025-10-07 15:04:10] 2025-10-07 18:52:51,085 | INFO     | 
[2025-10-07 15:04:10] 2025-10-07 18:52:51,085 | INFO     | job summary report
[2025-10-07 15:04:10] 2025-10-07 18:52:51,085 | INFO     | --------------------------------------------------
[2025-10-07 15:04:10] 2025-10-07 18:52:51,085 | INFO     | PanDA job id: 6833168419
[2025-10-07 15:04:10] 2025-10-07 18:52:51,085 | INFO     | task id: 46376905
[2025-10-07 15:04:10] 2025-10-07 18:52:51,086 | INFO     | errors: (none)
[2025-10-07 15:04:10] 2025-10-07 18:52:51,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 15:04:10] 2025-10-07 18:52:51,086 | INFO     | pilot state: finished 
[2025-10-07 15:04:10] 2025-10-07 18:52:51,086 | INFO     | transexitcode: 0
[2025-10-07 15:04:10] 2025-10-07 18:52:51,086 | INFO     | exeerrorcode: 0
[2025-10-07 15:04:10] 2025-10-07 18:52:51,086 | INFO     | exeerrordiag: 
[2025-10-07 15:04:10] 2025-10-07 18:52:51,086 | INFO     | exitcode: 0
[2025-10-07 15:04:10] 2025-10-07 18:52:51,086 | INFO     | exitmsg: OK
[2025-10-07 15:04:10] 2025-10-07 18:52:51,086 | INFO     | cpuconsumptiontime: 27545 s
[2025-10-07 15:04:10] 2025-10-07 18:52:51,105 | INFO     | nevents: 400
[2025-10-07 15:04:10] 2025-10-07 18:52:51,105 | INFO     | neventsw: 0
[2025-10-07 15:04:10] 2025-10-07 18:52:51,105 | INFO     | pid: 1923203
[2025-10-07 15:04:10] 2025-10-07 18:52:51,105 | INFO     | pgrp: 1923203
[2025-10-07 15:04:10] 2025-10-07 18:52:51,106 | INFO     | corecount: 8
[2025-10-07 15:04:10] 2025-10-07 18:52:51,106 | INFO     | event service: False
[2025-10-07 15:04:10] 2025-10-07 18:52:51,106 | INFO     | sizes: {0: 2348649, 1: 2348848, 9: 2349110, 11: 2349138, 6134: 2375870, 6139: 2384868, 6143: 2385052, 6155: 2385246}
[2025-10-07 15:04:10] 2025-10-07 18:52:51,106 | INFO     | --------------------------------------------------
[2025-10-07 15:04:10] 2025-10-07 18:52:51,106 | INFO     | 
[2025-10-07 15:04:10] 2025-10-07 18:52:51,106 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | job 6833168419 has completed (purged errors)
[2025-10-07 15:04:10] 2025-10-07 18:52:51,208 | INFO     | overall cleanup function is called
[2025-10-07 15:04:10] 2025-10-07 18:52:52,254 | INFO     | --- collectZombieJob: --- 10, [1923203]
[2025-10-07 15:04:10] 2025-10-07 18:52:52,254 | INFO     | zombie collector waiting for pid 1923203
[2025-10-07 15:04:10] 2025-10-07 18:52:52,254 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 15:04:10] 2025-10-07 18:52:52,254 | INFO     | collected zombie processes
[2025-10-07 15:04:10] 2025-10-07 18:52:52,254 | INFO     | will attempt to kill all subprocesses of pid=1923203
[2025-10-07 15:04:10] 2025-10-07 18:52:56,078 | INFO     | process IDs to be killed: [1923203] (in reverse order)
[2025-10-07 15:04:10] 2025-10-07 18:52:56,333 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 15:04:10] 2025-10-07 18:52:56,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 15:04:10] 2025-10-07 18:52:56,364 | INFO     | did not find any defunct processes belonging to 1923203
[2025-10-07 15:04:10] 2025-10-07 18:52:56,516 | INFO     | did not find any defunct processes belonging to 1923203
[2025-10-07 15:04:10] 2025-10-07 18:52:56,516 | INFO     | ready for new job
[2025-10-07 15:04:10] 2025-10-07 18:52:56,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 15:04:10] 2025-10-07 18:52:56,535 | INFO     | ***************************************
[2025-10-07 15:04:10] 2025-10-07 18:52:56,535 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 15:04:10] 2025-10-07 18:52:56,535 | INFO     | ***************************************
[2025-10-07 15:04:10] 2025-10-07 18:52:56,535 | INFO     | 
[2025-10-07 15:04:10] 2025-10-07 18:52:56,573 | INFO     | architecture information:
[2025-10-07 15:04:10] 2025-10-07 18:52:56,578 | INFO     | executing command: cat /etc/os-release
[2025-10-07 15:04:10] 2025-10-07 18:52:56,710 | INFO     | cat /etc/os-release:
[2025-10-07 15:04:10] NAME="CentOS Linux"
[2025-10-07 15:04:10] VERSION="7 (Core)"
[2025-10-07 15:04:10] ID="centos"
[2025-10-07 15:04:10] ID_LIKE="rhel fedora"
[2025-10-07 15:04:10] VERSION_ID="7"
[2025-10-07 15:04:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 15:04:10] ANSI_COLOR="0;31"
[2025-10-07 15:04:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 15:04:10] HOME_URL="https://www.centos.org/"
[2025-10-07 15:04:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 15:04:10] 
[2025-10-07 15:04:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 15:04:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 15:04:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 15:04:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 15:04:10] 
[2025-10-07 15:04:10] 2025-10-07 18:52:56,711 | INFO     | ***************************************
[2025-10-07 15:04:10] 2025-10-07 18:52:57,214 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-07 15:04:10] 2025-10-07 18:52:57,326 | INFO     | sufficient remaining disk space (126899716096 B)
[2025-10-07 15:04:10] 2025-10-07 18:52:57,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 15:04:10] 2025-10-07 18:52:57,392 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 15:04:10] 2025-10-07 18:52:57,392 | INFO     | update_server=False
[2025-10-07 15:04:10] 2025-10-07 18:52:57,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 15:04:10] 2025-10-07 18:52:57,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:04:10] 2025-10-07 18:52:57,776 | INFO     | aborting loop
[2025-10-07 15:04:10] 2025-10-07 18:52:57,884 | INFO     | all payload control threads have been joined
[2025-10-07 15:04:10] 2025-10-07 18:52:57,998 | INFO     | all data control threads have been joined
[2025-10-07 15:04:10] 2025-10-07 18:52:58,105 | INFO     | all job control threads have been joined
[2025-10-07 15:04:10] 2025-10-07 18:52:58,398 | INFO     | [job] retrieve thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:58,440 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:58,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 15:04:10] 2025-10-07 18:52:58,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 15:04:10] 2025-10-07 18:52:58,782 | INFO     | [job] job monitor thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:58,890 | INFO     | [payload] control thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:58,957 | INFO     | [payload] failed_post thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:59,004 | INFO     | [data] control thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:59,114 | INFO     | [job] control thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:59,194 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:59,194 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:59,195 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:59,195 | INFO     | [data] copytool_in thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:59,362 | INFO     | [payload] validate_post thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:59,389 | INFO     | [job] validate thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:52:59,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:04:10] 2025-10-07 18:53:00,669 | INFO     | [data] copytool_out thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:53:00,837 | INFO     | [job] queue monitor thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:53:02,712 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 15:04:10] 2025-10-07 18:53:05,698 | INFO     | [monitor] cgroup control has ended
[2025-10-07 15:04:10] 2025-10-07 18:53:06,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140012558313280)>', '<ExcThread(monitor, started 140012217681664)>']
[2025-10-07 15:04:10] 2025-10-07 18:53:11,961 | INFO     | all workflow threads have been joined
[2025-10-07 15:04:10] 2025-10-07 18:53:11,961 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 15:04:10] 2025-10-07 18:53:11,969 | INFO     | traces error code: 0
[2025-10-07 15:04:10] 2025-10-07 18:53:11,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 15:04:10] 2025-10-07 18:53:29,985 | INFO     | PID=1879009 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 15:04:10] 2025-10-07 18:53:29,988 | INFO     | .. there are 57 such processes running
[2025-10-07 15:04:10] 2025-10-07 18:53:29,988 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 15:04:10] 2025-10-07 18:53:29,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 15:04:10] 2025-10-07 18:53:29,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 15:04:10] 2025-10-07 18:53:29,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 15:04:10] 2025-10-07 18:53:29,989 | INFO     | [monitor] control thread has ended
[2025-10-07 15:04:10] 2025-10-07 18:53:30,336 [wrapper] ==== pilot stdout END ====
[2025-10-07 15:04:10] 2025-10-07 18:53:30,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 15:04:10] 2025-10-07 18:53:30,388 [wrapper] pilotpid: 1879009
[2025-10-07 15:04:10] 2025-10-07 18:53:30,407 [wrapper] Pilot exit status: 0
[2025-10-07 15:04:10] 2025-10-07 18:53:30,495 [wrapper] pandaids: 6833168419 6833168419
[2025-10-07 15:04:10] 2025-10-07 18:53:30,647 [wrapper] cleanup supervisor_pilot 2838493 1879010
[2025-10-07 15:04:10] 2025-10-07 18:53:30,651 [wrapper] Test setup, not cleaning
[2025-10-07 15:04:10] 2025-10-07 18:53:30,655 [wrapper] apfmon messages muted
[2025-10-07 15:04:10] 2025-10-07 18:53:30,664 [wrapper] ==== wrapper stdout END ====
[2025-10-07 15:04:10] 2025-10-07 18:53:30,677 [wrapper] ==== wrapper stderr END ====
[2025-10-07 15:04:10]  *** Error codes and diagnostics ***
[2025-10-07 15:04:10]     "exeErrorCode": 0,
[2025-10-07 15:04:10]     "exeErrorDiag": "",
[2025-10-07 15:04:10]     "pilotErrorCode": 0,
[2025-10-07 15:04:10]     "pilotErrorDiag": "",
[2025-10-07 15:04:10]  *** Listing of results directory ***
[2025-10-07 15:04:10] total 600088
[2025-10-07 15:04:10] drwx------. 4 boincer umatlas      4096 Jul 31 09:00 pilot3
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas      5112 Oct  7 00:30 queuedata.json
[2025-10-07 15:04:10] -rwx------. 1 boincer umatlas     36292 Oct  7 00:31 runpilot2-wrapper.sh
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas    552446 Oct  7 00:31 pilot3.tar.gz
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas       100 Oct  7 11:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 15:04:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  7 11:24 run_atlas
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas       105 Oct  7 11:24 job.xml
[2025-10-07 15:04:10] -rw-r--r--. 3 boincer umatlas 212834037 Oct  7 11:24 EVNT.46376901._004766.pool.root.1
[2025-10-07 15:04:10] -rw-r--r--. 3 boincer umatlas 212834037 Oct  7 11:24 ATLAS.root_0
[2025-10-07 15:04:10] drwxrwx--x. 2 boincer umatlas      4096 Oct  7 11:24 shared
[2025-10-07 15:04:10] -rw-r--r--. 2 boincer umatlas    565597 Oct  7 11:24 input.tar.gz
[2025-10-07 15:04:10] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 11:24 start_atlas.sh
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas         0 Oct  7 11:24 boinc_lockfile
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas      2521 Oct  7 13:09 pandaJob.out
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas    977512 Oct  7 13:09 agis_schedconf.cvmfs.json
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas 182734943 Oct  7 14:51 HITS.46376905._128104.pool.root.1
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas       529 Oct  7 14:51 boinc_task_state.xml
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas      1048 Oct  7 14:52 memory_monitor_summary.json
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas   1560401 Oct  7 14:52 agis_ddmendpoints.agis.ALL.json
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas    347406 Oct  7 14:52 log.46376905._128104.job.log.tgz.1
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas      7799 Oct  7 14:52 heartbeat.json
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas       823 Oct  7 14:53 pilotlog.txt
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas        96 Oct  7 14:53 pilot_heartbeat.json
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas    745626 Oct  7 14:53 log.46376905._128104.job.log.1
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas       357 Oct  7 14:53 output.list
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas       620 Oct  7 14:53 runtime_log
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas   1116160 Oct  7 14:53 result.tar.gz
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas       780 Oct  7 14:53 ZedKDmbXEQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmP6VNDmf3kkFo.diag
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas      8783 Oct  7 14:53 runtime_log.err
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas      6936 Oct  7 15:04 init_data.xml
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas      8192 Oct  7 15:04 boinc_mmap_file
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas        27 Oct  7 15:04 wrapper_checkpoint.txt
[2025-10-07 15:04:10] -rw-r--r--. 1 boincer umatlas     23154 Oct  7 15:04 stderr.txt
[2025-10-07 15:04:10] HITS file was successfully produced:
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas 182734943 Oct  7 14:51 shared/HITS.pool.root.1
[2025-10-07 15:04:10]  *** Contents of shared directory: ***
[2025-10-07 15:04:10] total 387976
[2025-10-07 15:04:10] -rw-r--r--. 3 boincer umatlas 212834037 Oct  7 11:24 ATLAS.root_0
[2025-10-07 15:04:10] -rw-r--r--. 2 boincer umatlas    565597 Oct  7 11:24 input.tar.gz
[2025-10-07 15:04:10] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 11:24 start_atlas.sh
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas 182734943 Oct  7 14:51 HITS.pool.root.1
[2025-10-07 15:04:10] -rw-------. 1 boincer umatlas   1116160 Oct  7 14:53 result.tar.gz
15:04:12 (1854862): run_atlas exited; CPU time 27588.374829
15:04:12 (1854862): called boinc_finish(0)

</stderr_txt>
]]>

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