Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:16:40 (22907): wrapper (7.7.26015): starting
10:16:40 (22907): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 10:16:40] Arguments: --nthreads 12
[2025-10-07 10:16:40] Threads: 12
[2025-10-07 10:16:40] Checking for CVMFS
[2025-10-07 10:16:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 10:16:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 10:16:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 10:16:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 10:16:41] 2.11.2.0 2925 215790 101244 151438 2 56 19428457 20275201 1 130560 1 104124595 99.984 13062159 12486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 10:16:41] CVMFS is ok
[2025-10-07 10:16:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 10:16:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 10:16:41] Further information can be found at the LHC@home message board.
[2025-10-07 10:16:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 10:16:41] Checking for apptainer binary...
[2025-10-07 10:16:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 10:16:41] Running /usr/bin/apptainer --version
[2025-10-07 10:16:41] apptainer version 1.3.2-1.el7
[2025-10-07 10:16:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 10:16:42] c-205-9.aglt2.org
[2025-10-07 10:16:42] apptainer works
[2025-10-07 10:16:42] Set ATHENA_PROC_NUMBER=12
[2025-10-07 10:16:42] Set ATHENA_CORE_NUMBER=12
[2025-10-07 10:16:42] Starting ATLAS job with PandaID=6833160773
[2025-10-07 10:16:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 11:23:28]  *** The last 200 lines of the pilot log: ***
[2025-10-07 11:23:28]  replicas=None
[2025-10-07 11:23:28]  scope=mc23_13p6TeV
[2025-10-07 11:23:28]  status=None
[2025-10-07 11:23:28]  status_code=0
[2025-10-07 11:23:28]  storage_token=
[2025-10-07 11:23:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6833160773/log.46376905._124838.job.log.tgz.1
[2025-10-07 11:23:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/6e/log.46376905._124838.job.log.tgz.1
[2025-10-07 11:23:28]  workdir=None
[2025-10-07 11:23:28] ]
[2025-10-07 11:23:28] 2025-10-07 15:22:47,871 | INFO     | transferring file log.46376905._124838.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6833160773/log.46376905._124838.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-07 11:23:28] 2025-10-07 15:22:47,872 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6833160773/log.46376905._124838.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._124838.job
[2025-10-07 11:23:28] 2025-10-07 15:22:47,894 | INFO     | adding to output.list: log.46376905._124838.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/6e/log.46376905._124838.job.log.tg
[2025-10-07 11:23:28] 2025-10-07 15:22:47,895 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 11:23:28] 2025-10-07 15:22:47,896 | INFO     | summary of transferred files:
[2025-10-07 11:23:28] 2025-10-07 15:22:47,896 | INFO     |  -- lfn=log.46376905._124838.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 11:23:28] 2025-10-07 15:22:47,896 | INFO     | stage-out finished correctly
[2025-10-07 11:23:28] 2025-10-07 15:22:49,227 | INFO     | time since job start (3952s) is within the limit (172800.0s)
[2025-10-07 11:23:28] 2025-10-07 15:22:49,305 | INFO     | monitor loop #295: job 0:6833160773 is in state 'finished'
[2025-10-07 11:23:28] 2025-10-07 15:22:49,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 11:23:28] 2025-10-07 15:22:50,596 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 11:23:28] 2025-10-07 15:22:50,990 | INFO     | job 6833160773 has state=finished
[2025-10-07 11:23:28] 2025-10-07 15:22:50,990 | INFO     | preparing for final server update for job 6833160773 in state='finished'
[2025-10-07 11:23:28] 2025-10-07 15:22:50,991 | INFO     | this job has now completed (state=finished)
[2025-10-07 11:23:28] 2025-10-07 15:22:50,991 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 11:23:28] 2025-10-07 15:22:50,991 | INFO     | log transfer has been attempted: DONE
[2025-10-07 11:23:28] 2025-10-07 15:22:50,992 | INFO     | job 6833160773 has finished - writing final server update
[2025-10-07 11:23:28] 2025-10-07 15:22:50,992 | INFO     | total number of processed events: 400 (read)
[2025-10-07 11:23:28] 2025-10-07 15:22:50,993 | INFO     | executing command: lscpu
[2025-10-07 11:23:28] 2025-10-07 15:22:51,019 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 11:23:28] 2025-10-07 15:22:51,242 | INFO     | time since job start (3954s) is within the limit (172800.0s)
[2025-10-07 11:23:28] 2025-10-07 15:22:51,808 | INFO     | monitor loop #296: job 0:6833160773 is in state 'finished'
[2025-10-07 11:23:28] 2025-10-07 15:22:51,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 11:23:28] 2025-10-07 15:22:53,248 | INFO     | time since job start (3956s) is within the limit (172800.0s)
[2025-10-07 11:23:28] 2025-10-07 15:22:54,311 | INFO     | monitor loop #297: job 0:6833160773 is in state 'finished'
[2025-10-07 11:23:28] 2025-10-07 15:22:54,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 11:23:28] 2025-10-07 15:22:55,253 | INFO     | time since job start (3958s) is within the limit (172800.0s)
[2025-10-07 11:23:28] 2025-10-07 15:22:55,820 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-07 11:23:28] 2025-10-07 15:22:55,824 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-07 11:23:28] 2025-10-07 15:22:55,827 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6833160773/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 11:23:28] 2025-10-07 15:22:55,828 | INFO     | extracted standard info from prmon json
[2025-10-07 11:23:28] 2025-10-07 15:22:55,828 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 11:23:28] 2025-10-07 15:22:55,828 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 11:23:28] 2025-10-07 15:22:55,828 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 11:23:28] 2025-10-07 15:22:55,829 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 11:23:28] 2025-10-07 15:22:55,830 | INFO     | fitting pss+swap vs Time
[2025-10-07 11:23:28] 2025-10-07 15:22:55,830 | INFO     | sum of square deviations: 60482994.5
[2025-10-07 11:23:28] 2025-10-07 15:22:55,831 | INFO     | sum of deviations: -2121327947.9999998
[2025-10-07 11:23:28] 2025-10-07 15:22:55,831 | INFO     | mean x: 1759848689.5
[2025-10-07 11:23:28] 2025-10-07 15:22:55,831 | INFO     | mean y: 2926400.827586207
[2025-10-07 11:23:28] 2025-10-07 15:22:55,831 | INFO     | -- intersect: 61726328824.090935
[2025-10-07 11:23:28] 2025-10-07 15:22:55,831 | INFO     | intersect: 61726328824.090935
[2025-10-07 11:23:28] 2025-10-07 15:22:55,831 | INFO     | chi2: 0.04622691095756088
[2025-10-07 11:23:28] 2025-10-07 15:22:55,831 | INFO     | -- intersect: 61726328824.090935
[2025-10-07 11:23:28] 2025-10-07 15:22:55,832 | INFO     | current memory leak: -35.07 B/s (using 58 data points, chi2=0.05)
[2025-10-07 11:23:28] 2025-10-07 15:22:55,832 | INFO     | could have reported an average CPU frequency of 2056 MHz (6 samples)
[2025-10-07 11:23:28] 2025-10-07 15:22:55,832 | INFO     | ..............................
[2025-10-07 11:23:28] 2025-10-07 15:22:55,832 | INFO     | . Timing measurements:
[2025-10-07 11:23:28] 2025-10-07 15:22:55,832 | INFO     | . get job = 0 s
[2025-10-07 11:23:28] 2025-10-07 15:22:55,832 | INFO     | . initial setup = 2 s
[2025-10-07 11:23:28] 2025-10-07 15:22:55,832 | INFO     | . payload setup = 7 s
[2025-10-07 11:23:28] 2025-10-07 15:22:55,833 | INFO     | . stage-in = 0 s
[2025-10-07 11:23:28] 2025-10-07 15:22:55,833 | INFO     | . payload execution = 3922 s
[2025-10-07 11:23:28] 2025-10-07 15:22:55,833 | INFO     | . stage-out = 0 s
[2025-10-07 11:23:28] 2025-10-07 15:22:55,833 | INFO     | . log creation = 0 s
[2025-10-07 11:23:28] 2025-10-07 15:22:55,833 | INFO     | ..............................
[2025-10-07 11:23:28] 2025-10-07 15:22:55,914 | INFO     | 
[2025-10-07 11:23:28] 2025-10-07 15:22:55,915 | INFO     | job summary report
[2025-10-07 11:23:28] 2025-10-07 15:22:55,915 | INFO     | --------------------------------------------------
[2025-10-07 11:23:28] 2025-10-07 15:22:55,915 | INFO     | PanDA job id: 6833160773
[2025-10-07 11:23:28] 2025-10-07 15:22:55,915 | INFO     | task id: 46376905
[2025-10-07 11:23:28] 2025-10-07 15:22:55,915 | INFO     | errors: (none)
[2025-10-07 11:23:28] 2025-10-07 15:22:55,916 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 11:23:28] 2025-10-07 15:22:55,916 | INFO     | pilot state: finished 
[2025-10-07 11:23:28] 2025-10-07 15:22:55,916 | INFO     | transexitcode: 0
[2025-10-07 11:23:28] 2025-10-07 15:22:55,916 | INFO     | exeerrorcode: 0
[2025-10-07 11:23:28] 2025-10-07 15:22:55,916 | INFO     | exeerrordiag: 
[2025-10-07 11:23:28] 2025-10-07 15:22:55,916 | INFO     | exitcode: 0
[2025-10-07 11:23:28] 2025-10-07 15:22:55,917 | INFO     | exitmsg: OK
[2025-10-07 11:23:28] 2025-10-07 15:22:55,917 | INFO     | cpuconsumptiontime: 42973 s
[2025-10-07 11:23:28] 2025-10-07 15:22:55,917 | INFO     | nevents: 400
[2025-10-07 11:23:28] 2025-10-07 15:22:55,917 | INFO     | neventsw: 0
[2025-10-07 11:23:28] 2025-10-07 15:22:55,917 | INFO     | pid: 574
[2025-10-07 11:23:28] 2025-10-07 15:22:55,917 | INFO     | pgrp: 574
[2025-10-07 11:23:28] 2025-10-07 15:22:55,917 | INFO     | corecount: 12
[2025-10-07 11:23:28] 2025-10-07 15:22:55,918 | INFO     | event service: False
[2025-10-07 11:23:28] 2025-10-07 15:22:55,918 | INFO     | sizes: {0: 2348598, 1: 2348797, 5: 2349059, 11: 2349115, 3933: 2374950, 3934: 2383948, 3937: 2384132, 3942: 2384326}
[2025-10-07 11:23:28] 2025-10-07 15:22:55,918 | INFO     | --------------------------------------------------
[2025-10-07 11:23:28] 2025-10-07 15:22:55,918 | INFO     | 
[2025-10-07 11:23:28] 2025-10-07 15:22:55,918 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 11:23:28] 2025-10-07 15:22:55,942 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,943 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,943 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,943 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,943 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,943 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,945 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 11:23:28] 2025-10-07 15:22:55,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,946 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 11:23:28] 2025-10-07 15:22:55,946 | INFO     | job 6833160773 has completed (purged errors)
[2025-10-07 11:23:28] 2025-10-07 15:22:55,946 | INFO     | overall cleanup function is called
[2025-10-07 11:23:28] 2025-10-07 15:22:56,954 | INFO     | --- collectZombieJob: --- 10, [574]
[2025-10-07 11:23:28] 2025-10-07 15:22:56,954 | INFO     | zombie collector waiting for pid 574
[2025-10-07 11:23:28] 2025-10-07 15:22:56,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 11:23:28] 2025-10-07 15:22:56,955 | INFO     | collected zombie processes
[2025-10-07 11:23:28] 2025-10-07 15:22:56,955 | INFO     | will attempt to kill all subprocesses of pid=574
[2025-10-07 11:23:28] 2025-10-07 15:22:57,045 | INFO     | process IDs to be killed: [574] (in reverse order)
[2025-10-07 11:23:28] 2025-10-07 15:22:57,099 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 11:23:28] 2025-10-07 15:22:57,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 11:23:28] 2025-10-07 15:22:57,101 | INFO     | did not find any defunct processes belonging to 574
[2025-10-07 11:23:28] 2025-10-07 15:22:57,104 | INFO     | did not find any defunct processes belonging to 574
[2025-10-07 11:23:28] 2025-10-07 15:22:57,104 | INFO     | ready for new job
[2025-10-07 11:23:28] 2025-10-07 15:22:57,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 11:23:28] 2025-10-07 15:22:57,105 | INFO     | ***************************************
[2025-10-07 11:23:28] 2025-10-07 15:22:57,105 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 11:23:28] 2025-10-07 15:22:57,105 | INFO     | ***************************************
[2025-10-07 11:23:28] 2025-10-07 15:22:57,105 | INFO     | 
[2025-10-07 11:23:28] 2025-10-07 15:22:57,106 | INFO     | architecture information:
[2025-10-07 11:23:28] 2025-10-07 15:22:57,106 | INFO     | executing command: cat /etc/os-release
[2025-10-07 11:23:28] 2025-10-07 15:22:57,122 | INFO     | cat /etc/os-release:
[2025-10-07 11:23:28] NAME="CentOS Linux"
[2025-10-07 11:23:28] VERSION="7 (Core)"
[2025-10-07 11:23:28] ID="centos"
[2025-10-07 11:23:28] ID_LIKE="rhel fedora"
[2025-10-07 11:23:28] VERSION_ID="7"
[2025-10-07 11:23:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 11:23:28] ANSI_COLOR="0;31"
[2025-10-07 11:23:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 11:23:28] HOME_URL="https://www.centos.org/"
[2025-10-07 11:23:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 11:23:28] 
[2025-10-07 11:23:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 11:23:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 11:23:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 11:23:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 11:23:28] 
[2025-10-07 11:23:28] 2025-10-07 15:22:57,123 | INFO     | ***************************************
[2025-10-07 11:23:28] 2025-10-07 15:22:57,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 11:23:28] 2025-10-07 15:22:57,643 | INFO     | sufficient remaining disk space (29390536704 B)
[2025-10-07 11:23:28] 2025-10-07 15:22:57,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 11:23:28] 2025-10-07 15:22:57,643 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 11:23:28] 2025-10-07 15:22:57,643 | INFO     | update_server=False
[2025-10-07 11:23:28] 2025-10-07 15:22:57,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 11:23:28] 2025-10-07 15:22:57,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 11:23:28] 2025-10-07 15:22:57,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:23:28] 2025-10-07 15:22:57,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:23:28] 2025-10-07 15:22:57,820 | INFO     | aborting loop
[2025-10-07 11:23:28] 2025-10-07 15:22:58,368 | INFO     | all job control threads have been joined
[2025-10-07 11:23:28] 2025-10-07 15:22:58,489 | INFO     | all payload control threads have been joined
[2025-10-07 11:23:28] 2025-10-07 15:22:58,494 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 11:23:28] 2025-10-07 15:22:58,624 | INFO     | all data control threads have been joined
[2025-10-07 11:23:28] 2025-10-07 15:22:58,648 | INFO     | [job] retrieve thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:58,650 | INFO     | [job] queue monitor thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:58,825 | INFO     | [job] job monitor thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:58,959 | INFO     | [payload] validate_post thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:59,032 | INFO     | [job] validate thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:59,090 | INFO     | [payload] failed_post thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:59,375 | INFO     | [job] control thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:59,495 | INFO     | [payload] control thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:59,528 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:59,529 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:59,630 | INFO     | [data] control thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:22:59,682 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:23:00,073 | INFO     | [data] copytool_in thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:23:00,496 | INFO     | [data] copytool_out thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:23:01,650 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:23:03,526 | INFO     | [monitor] cgroup control has ended
[2025-10-07 11:23:28] 2025-10-07 15:23:08,451 | INFO     | job.realtimelogging is not enabled
[2025-10-07 11:23:28] 2025-10-07 15:23:09,456 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 11:23:28] 2025-10-07 15:23:11,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140210589095744)>', '<ExcThread(monitor, started 140209970718464)>']
[2025-10-07 11:23:28] 2025-10-07 15:23:16,079 | INFO     | all workflow threads have been joined
[2025-10-07 11:23:28] 2025-10-07 15:23:16,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 11:23:28] 2025-10-07 15:23:16,079 | INFO     | traces error code: 0
[2025-10-07 11:23:28] 2025-10-07 15:23:16,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 11:23:28] 2025-10-07 15:23:28,457 | INFO     | PID=26586 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 11:23:28] 2025-10-07 15:23:28,457 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 11:23:28] 2025-10-07 15:23:28,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 11:23:28] 2025-10-07 15:23:28,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 11:23:28] 2025-10-07 15:23:28,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 11:23:28] 2025-10-07 15:23:28,458 | INFO     | [monitor] control thread has ended
[2025-10-07 11:23:28] 2025-10-07 15:23:28,569 [wrapper] ==== pilot stdout END ====
[2025-10-07 11:23:28] 2025-10-07 15:23:28,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 11:23:28] 2025-10-07 15:23:28,576 [wrapper] pilotpid: 26586
[2025-10-07 11:23:28] 2025-10-07 15:23:28,580 [wrapper] Pilot exit status: 0
[2025-10-07 11:23:28] 2025-10-07 15:23:28,595 [wrapper] pandaids: 6833160773
[2025-10-07 11:23:28] 2025-10-07 15:23:28,637 [wrapper] cleanup supervisor_pilot  6622 26587
[2025-10-07 11:23:28] 2025-10-07 15:23:28,641 [wrapper] Test setup, not cleaning
[2025-10-07 11:23:28] 2025-10-07 15:23:28,645 [wrapper] apfmon messages muted
[2025-10-07 11:23:28] 2025-10-07 15:23:28,649 [wrapper] ==== wrapper stdout END ====
[2025-10-07 11:23:28] 2025-10-07 15:23:28,652 [wrapper] ==== wrapper stderr END ====
[2025-10-07 11:23:28]  *** Error codes and diagnostics ***
[2025-10-07 11:23:28]     "exeErrorCode": 0,
[2025-10-07 11:23:28]     "exeErrorDiag": "",
[2025-10-07 11:23:28]     "pilotErrorCode": 0,
[2025-10-07 11:23:28]     "pilotErrorDiag": "",
[2025-10-07 11:23:28]  *** Listing of results directory ***
[2025-10-07 11:23:28] total 391944
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas    552446 Oct  6 21:08 pilot3.tar.gz
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas      5112 Oct  6 21:28 queuedata.json
[2025-10-07 11:23:28] -rwx------ 1 boincer umatlas     36292 Oct  6 21:28 runpilot2-wrapper.sh
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas       100 Oct  7 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 11:23:28] -rwxr-xr-x 1 boincer umatlas      7986 Oct  7 10:16 run_atlas
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas       105 Oct  7 10:16 job.xml
[2025-10-07 11:23:28] -rw-r--r-- 2 boincer umatlas 214164539 Oct  7 10:16 EVNT.46376901._004636.pool.root.1
[2025-10-07 11:23:28] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 10:16 start_atlas.sh
[2025-10-07 11:23:28] drwxrwx--x 2 boincer umatlas      4096 Oct  7 10:16 shared
[2025-10-07 11:23:28] -rw-r--r-- 2 boincer umatlas    565606 Oct  7 10:16 input.tar.gz
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas         0 Oct  7 10:16 boinc_lockfile
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas      2520 Oct  7 10:16 pandaJob.out
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas    976803 Oct  7 10:16 agis_schedconf.cvmfs.json
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas   1560401 Oct  7 10:16 agis_ddmendpoints.agis.ALL.json
[2025-10-07 11:23:28] drwx------ 4 boincer umatlas      4096 Oct  7 10:16 pilot3
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas      5952 Oct  7 11:18 init_data.xml
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas 181398049 Oct  7 11:22 HITS.46376905._124838.pool.root.1
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas       529 Oct  7 11:22 boinc_task_state.xml
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas      1050 Oct  7 11:22 memory_monitor_summary.json
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas    370808 Oct  7 11:22 log.46376905._124838.job.log.tgz.1
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas        95 Oct  7 11:22 pilot_heartbeat.json
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas      7848 Oct  7 11:22 heartbeat.json
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas      8192 Oct  7 11:23 boinc_mmap_file
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas        27 Oct  7 11:23 wrapper_checkpoint.txt
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas       745 Oct  7 11:23 pilotlog.txt
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas    578526 Oct  7 11:23 log.46376905._124838.job.log.1
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas       357 Oct  7 11:23 output.list
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas       620 Oct  7 11:23 runtime_log
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas    972800 Oct  7 11:23 result.tar.gz
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas      8700 Oct  7 11:23 runtime_log.err
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas       658 Oct  7 11:23 BymLDmRgBQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmeKMDme7fhOo.diag
[2025-10-07 11:23:28] -rw-r--r-- 1 boincer umatlas     21807 Oct  7 11:23 stderr.txt
[2025-10-07 11:23:28] HITS file was successfully produced:
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas 181398049 Oct  7 11:22 shared/HITS.pool.root.1
[2025-10-07 11:23:28]  *** Contents of shared directory: ***
[2025-10-07 11:23:28] total 387824
[2025-10-07 11:23:28] -rw-r--r-- 2 boincer umatlas 214164539 Oct  7 10:16 ATLAS.root_0
[2025-10-07 11:23:28] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 10:16 start_atlas.sh
[2025-10-07 11:23:28] -rw-r--r-- 2 boincer umatlas    565606 Oct  7 10:16 input.tar.gz
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas 181398049 Oct  7 11:22 HITS.pool.root.1
[2025-10-07 11:23:28] -rw------- 1 boincer umatlas    972800 Oct  7 11:23 result.tar.gz
11:23:30 (22907): run_atlas exited; CPU time 42944.920197
11:23:30 (22907): called boinc_finish(0)

</stderr_txt>
]]>

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