Name p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn_2
Workunit 235428422
Created 7 Oct 2025, 11:54:12 UTC
Sent 7 Oct 2025, 14:20:59 UTC
Report deadline 15 Oct 2025, 14:20:59 UTC
Received 8 Oct 2025, 16:51:53 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10877980
Run time 2 hours 50 min 2 sec
CPU time 8 hours 21 min
Validate state Valid
Credit 506.30
Device peak FLOPS 26.65 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.79 GB
Peak swap size 31.65 GB
Peak disk usage 794.06 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:06:26 (2042349): wrapper (7.7.26015): starting
12:06:26 (2042349): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 12:06:26] Arguments: --nthreads 8
[2025-10-07 12:06:26] Threads: 8
[2025-10-07 12:06:26] Checking for CVMFS
[2025-10-07 12:06:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 12:06:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 12:06:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 12:06:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 12:06:27] 2.13.2.0 645510 118082 293536 151440 0 343 28576002 40960001 18173 16776704 2 289111382 99.685 236357991 34003 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 12:06:27] CVMFS is ok
[2025-10-07 12:06:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 12:06:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 12:06:27] Further information can be found at the LHC@home message board.
[2025-10-07 12:06:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 12:06:27] Checking for apptainer binary...
[2025-10-07 12:06:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 12:06:27] Running /usr/bin/apptainer --version
[2025-10-07 12:06:27] apptainer version 1.4.2-1.el9
[2025-10-07 12:06:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 12:06:27] c-212-5.aglt2.org
[2025-10-07 12:06:27] apptainer works
[2025-10-07 12:06:27] Set ATHENA_PROC_NUMBER=8
[2025-10-07 12:06:27] Set ATHENA_CORE_NUMBER=8
[2025-10-07 12:06:27] Starting ATLAS job with PandaID=6829376182
[2025-10-07 12:06:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:48:15 (5168): wrapper (7.7.26015): starting
09:48:15 (5168): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 09:48:15] Arguments: --nthreads 8
[2025-10-08 09:48:15] Threads: 8
[2025-10-08 09:48:15] This job has been restarted, cleaning up previous attempt
[2025-10-08 09:48:15] Checking for CVMFS
[2025-10-08 09:48:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 09:48:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 09:48:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 09:48:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 09:48:15] 2.13.2.0 5096 0 29200 151473 3 1 28596459 40960000 0 16776704 0 0 0.000 1291 99307 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 09:48:15] CVMFS is ok
[2025-10-08 09:48:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 09:48:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 09:48:15] Further information can be found at the LHC@home message board.
[2025-10-08 09:48:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 09:48:15] Checking for apptainer binary...
[2025-10-08 09:48:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 09:48:15] Running /usr/bin/apptainer --version
[2025-10-08 09:48:15] apptainer version 1.4.2-1.el9
[2025-10-08 09:48:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 09:48:15] c-212-5.aglt2.org
[2025-10-08 09:48:15] apptainer works
[2025-10-08 09:48:15] Set ATHENA_PROC_NUMBER=8
[2025-10-08 09:48:15] Set ATHENA_CORE_NUMBER=8
[2025-10-08 09:48:15] Starting ATLAS job with PandaID=6829376182
[2025-10-08 09:48:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 09:51:22] Job failed
[2025-10-08 09:51:22] ++ pwd
[2025-10-08 09:51:22] + export RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/0/
[2025-10-08 09:51:22] + RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/0/
[2025-10-08 09:51:22] + mv ATLAS.root_0 EVNT.46376901._001954.pool.root.1
[2025-10-08 09:51:22] mv: &#226;&#128;&#152;ATLAS.root_0&#226;&#128;&#153; and &#226;&#128;&#152;EVNT.46376901._001954.pool.root.1&#226;&#128;&#153; are the same file
[2025-10-08 09:51:22] + tar --strip-components=5 -xvf input.tar.gz
[2025-10-08 09:51:22] + umask 077
[2025-10-08 09:51:22] ++ date +%s
[2025-10-08 09:51:22] + ACCOUNTING_STARTTIME=1759931295
[2025-10-08 09:51:22] + echo 'Detecting resource accounting method available for the job.'
[2025-10-08 09:51:22] Detecting resource accounting method available for the job.
[2025-10-08 09:51:22] + JOB_ACCOUNTING=
[2025-10-08 09:51:22] + command -v arc-job-cgroup
[2025-10-08 09:51:22] + '[' -z '' ']'
[2025-10-08 09:51:22] + GNU_TIME=/usr/bin/time
[2025-10-08 09:51:22] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-10-08 09:51:22] Looking for /usr/bin/time tool for accounting measurements
[2025-10-08 09:51:22] + '[' '!' -z /usr/bin/time ']'
[2025-10-08 09:51:22] + /usr/bin/time --version
[2025-10-08 09:51:22] + echo 'GNU time found and will be used for job accounting.'
[2025-10-08 09:51:22] GNU time found and will be used for job accounting.
[2025-10-08 09:51:22] + JOB_ACCOUNTING=gnutime
[2025-10-08 09:51:22] + '[' -z gnutime ']'
[2025-10-08 09:51:22] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-10-08 09:51:22] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-10-08 09:51:22] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-10-04/BOINC_MCORE/6829376182.out
[2025-10-08 09:51:22] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-10-04/BOINC_MCORE/6829376182.out
[2025-10-08 09:51:22] + export PILOT_NOKILL=YES
[2025-10-08 09:51:22] + PILOT_NOKILL=YES
[2025-10-08 09:51:22] + export GRID_GLOBAL_JOBID=p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn
[2025-10-08 09:51:22] + GRID_GLOBAL_JOBID=p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn
[2025-10-08 09:51:22] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn
[2025-10-08 09:51:22] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn
[2025-10-08 09:51:22] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-10-08 09:51:22] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-10-08 09:51:22] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-10-08 09:51:22] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-10-08 09:51:22] ++ pwd
[2025-10-08 09:51:22] + RUNTIME_JOB_DIR=/tmp/boinchome/slots/0
[2025-10-08 09:51:22] + RUNTIME_JOB_STDIN=/dev/null
[2025-10-08 09:51:22] ++ pwd
[2025-10-08 09:51:22] + RUNTIME_JOB_STDOUT=/tmp/boinchome/slots/0/log.46376905._054805.job.log.1
[2025-10-08 09:51:22] ++ pwd
[2025-10-08 09:51:22] + RUNTIME_JOB_STDERR=/tmp/boinchome/slots/0/log.46376905._054805.job.log.1
[2025-10-08 09:51:22] ++ pwd
[2025-10-08 09:51:22] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/0.diag
[2025-10-08 09:51:22] + '[' '!' -z '' ']'
[2025-10-08 09:51:22] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-10-08 09:51:22] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-10-08 09:51:22] + RUNTIME_FRONTEND_SEES_NODE=
[2025-10-08 09:51:22] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-10-08 09:51:22] + '[' '!' -z '' ']'
[2025-10-08 09:51:22] + '[' -z yes ']'
[2025-10-08 09:51:22] ++ pwd
[2025-10-08 09:51:22] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/0/p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn.diag
[2025-10-08 09:51:22] + runtimeenvironments=
[2025-10-08 09:51:22] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-10-08 09:51:22] + RTE_function_0 1
[2025-10-08 09:51:22] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-08 09:51:22] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-08 09:51:22] + export BOINC_APP=ATLAS
[2025-10-08 09:51:22] + BOINC_APP=ATLAS
[2025-10-08 09:51:22] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-08 09:51:22] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-08 09:51:22] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-08 09:51:22] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-08 09:51:22] + '[' -z 1 ']'
[2025-10-08 09:51:22] + '[' 1 == 1 ']'
[2025-10-08 09:51:22] + shift
[2025-10-08 09:51:22] + export SITE_NAME=BOINC
[2025-10-08 09:51:22] + SITE_NAME=BOINC
[2025-10-08 09:51:22] + export ATLAS_LOCAL_AREA=/tmp/boinchome/slots/0/
[2025-10-08 09:51:22] + ATLAS_LOCAL_AREA=/tmp/boinchome/slots/0/
[2025-10-08 09:51:22] + '[' 0 -ne 0 ']'
[2025-10-08 09:51:22] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-10-08 09:51:22] + '[' -f /etc/os-release ']'
[2025-10-08 09:51:22] +++ cat /etc/os-release
[2025-10-08 09:51:22] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-10-08 09:51:22] +++ NAME='CentOS Linux'
[2025-10-08 09:51:22] +++ VERSION='7 (Core)'
[2025-10-08 09:51:22] +++ ID=centos
[2025-10-08 09:51:22] +++ ID_LIKE='rhel fedora'
[2025-10-08 09:51:22] +++ VERSION_ID=7
[2025-10-08 09:51:22] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-10-08 09:51:22] +++ ANSI_COLOR='0;31'
[2025-10-08 09:51:22] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-10-08 09:51:22] +++ HOME_URL=https://www.centos.org/
[2025-10-08 09:51:22] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-10-08 09:51:22] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-10-08 09:51:22] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-10-08 09:51:22] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-10-08 09:51:22] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-10-08 09:51:22] ++ echo 'CentOS Linux 7 (Core)'
[2025-10-08 09:51:22] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-10-08 09:51:22] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-10-08 09:51:22] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-10-08 09:51:22] + HOME=/tmp/boinchome/slots/0
[2025-10-08 09:51:22] + export HOME
[2025-10-08 09:51:22] + cd /tmp/boinchome/slots/0
[2025-10-08 09:51:22] + '[' '!' -z '' ']'
[2025-10-08 09:51:22] + '[' -z '' ']'
[2025-10-08 09:51:22] ++ /bin/hostname -f
[2025-10-08 09:51:22] + nodename=c-212-5.aglt2.org
[2025-10-08 09:51:22] + echo nodename=c-212-5.aglt2.org
[2025-10-08 09:51:22] + echo Processors=2
[2025-10-08 09:51:22] + echo Nodecount=1
[2025-10-08 09:51:22] + echo Benchmark=HEPSPEC:1.0
[2025-10-08 09:51:22] + executable=./runpilot2-wrapper.sh
[2025-10-08 09:51:22] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-10-08 09:51:22] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-10-08 09:51:22] ++ head -n 1
[2025-10-08 09:51:22] ++ tr -d '\0'
[2025-10-08 09:51:22] + line1='#!/bin/bash'
[2025-10-08 09:51:22] ++ echo '#!/bin/bash'
[2025-10-08 09:51:22] ++ sed -n 's/^#! *//p'
[2025-10-08 09:51:22] + shebang=/bin/bash
[2025-10-08 09:51:22] ++ echo /bin/bash
[2025-10-08 09:51:22] ++ awk '{print $1}'
[2025-10-08 09:51:22] + interpreter=/bin/bash
[2025-10-08 09:51:22] + '[' /bin/bash = /usr/bin/env ']'
[2025-10-08 09:51:22] + '[' x/bin/bash = x ']'
[2025-10-08 09:51:22] + type /bin/bash
[2025-10-08 09:51:22] + '[' xgnutime = xgnutime ']'
[2025-10-08 09:51:22] + /usr/bin/time -o /tmp/boinchome/slots/0/p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.5.57 -z -t --piloturl local --mute --container
[2025-10-08 09:51:22] + RESULT=2
[2025-10-08 09:51:22] + sed -i -e /nodename=/d /tmp/boinchome/slots/0/p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn.diag
[2025-10-08 09:51:22] ++ grep domain_name init_data.xml
[2025-10-08 09:51:22] ++ awk -F '>' '{print $2}'
[2025-10-08 09:51:22] ++ awk -F '<' '{print $1}'
[2025-10-08 09:51:22] ++ sed -e 's# #_#g'
[2025-10-08 09:51:22] + hostname=c-212-5.aglt2.org
[2025-10-08 09:51:22] ++ grep user_name init_data.xml
[2025-10-08 09:51:22] ++ awk -F '>' '{print $2}'
[2025-10-08 09:51:22] ++ awk -F '<' '{print $1}'
[2025-10-08 09:51:22] ++ sed -e 's# #_#g'
[2025-10-08 09:51:22] + username=AGLT2
[2025-10-08 09:51:22] + nodename=AGLT2@c-212-5.aglt2.org
[2025-10-08 09:51:22] + echo nodename=AGLT2@c-212-5.aglt2.org
[2025-10-08 09:51:22] + '[' -n 8 ']'
[2025-10-08 09:51:22] + sed -i -e s/Processors=1/Processors=8/ /tmp/boinchome/slots/0/p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn.diag
[2025-10-08 09:51:22] + echo exitcode=2
[2025-10-08 09:51:22] + runtimeenvironments=
[2025-10-08 09:51:22] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-10-08 09:51:22] + RTE_function_0 2
[2025-10-08 09:51:22] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-08 09:51:22] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-10-08 09:51:22] + export BOINC_APP=ATLAS
[2025-10-08 09:51:22] + BOINC_APP=ATLAS
[2025-10-08 09:51:22] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-08 09:51:22] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-10-08 09:51:22] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-08 09:51:22] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-10-08 09:51:22] + '[' -z 2 ']'
[2025-10-08 09:51:22] + '[' 2 == 1 ']'
[2025-10-08 09:51:22] + '[' 0 -ne 0 ']'
[2025-10-08 09:51:22] + echo 'zip all output files'
[2025-10-08 09:51:22] + flist='*.diag '
[2025-10-08 09:51:22] + for f in ./heartbeat.json ./output.list ./log.46376905._054805.job.log.1 ./log.46376905._054805.job.log.1 ./gmlog/
[2025-10-08 09:51:22] + '[' -e ./heartbeat.json ']'
[2025-10-08 09:51:22] + flist='*.diag  ./heartbeat.json'
[2025-10-08 09:51:22] + for f in ./heartbeat.json ./output.list ./log.46376905._054805.job.log.1 ./log.46376905._054805.job.log.1 ./gmlog/
[2025-10-08 09:51:22] + '[' -e ./output.list ']'
[2025-10-08 09:51:22] + for f in ./heartbeat.json ./output.list ./log.46376905._054805.job.log.1 ./log.46376905._054805.job.log.1 ./gmlog/
[2025-10-08 09:51:22] + '[' -e ./log.46376905._054805.job.log.1 ']'
[2025-10-08 09:51:22] + flist='*.diag  ./heartbeat.json ./log.46376905._054805.job.log.1'
[2025-10-08 09:51:22] + for f in ./heartbeat.json ./output.list ./log.46376905._054805.job.log.1 ./log.46376905._054805.job.log.1 ./gmlog/
[2025-10-08 09:51:22] + '[' -e ./log.46376905._054805.job.log.1 ']'
[2025-10-08 09:51:22] + flist='*.diag  ./heartbeat.json ./log.46376905._054805.job.log.1 ./log.46376905._054805.job.log.1'
[2025-10-08 09:51:22] + for f in ./heartbeat.json ./output.list ./log.46376905._054805.job.log.1 ./log.46376905._054805.job.log.1 ./gmlog/
[2025-10-08 09:51:22] + '[' -e ./gmlog/ ']'
[2025-10-08 09:51:22] + '[' -f output.list ']'
[2025-10-08 09:51:22] + tar cvf result.tar.gz p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn.diag ./heartbeat.json ./log.46376905._054805.job.log.1 ./log.46376905._054805.job.log.1
[2025-10-08 09:51:22] + '[' xgnutime = xcgroup ']'
[2025-10-08 09:51:22] + '[' -n '' ']'
[2025-10-08 09:51:22] + '[' -n '' ']'
[2025-10-08 09:51:22] ++ date +%s
[2025-10-08 09:51:22] + ACCOUNTING_ENDTIME=1759931482
[2025-10-08 09:51:22] ++ date -d '1970-01-01 UTC 1759931295 seconds' +%Y%m%d%H%M%SZ
[2025-10-08 09:51:22] + echo LRMSStartTime=20251008094815Z
[2025-10-08 09:51:22] ++ date -d '1970-01-01 UTC 1759931482 seconds' +%Y%m%d%H%M%SZ
[2025-10-08 09:51:22] + echo LRMSEndTime=20251008095122Z
[2025-10-08 09:51:22] + echo walltime=187
[2025-10-08 09:51:22] + echo exitcode=2
[2025-10-08 09:51:22] + exit 2
[2025-10-08 09:51:22] ./pilotlog.txt
[2025-10-08 09:51:22] ./log.46376905._054805.job.log.1
[2025-10-08 09:51:22] ./runtime_log
[2025-10-08 09:51:22] ./runtime_log.err
[2025-10-08 09:51:22] ./PanDA_Pilot-6829376182/pilotlog.txt
[2025-10-08 09:51:22] ./PanDA_Pilot-6829376182/prmon.log
[2025-10-08 09:51:22] ./PanDA_Pilot-6829376182/log.EVNTtoHITS
[2025-10-08 09:51:22] ./PanDA_Pilot-6829376182/PoolFileCatalog.xml
[2025-10-08 09:51:22] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-10-08 09:51:22] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-10-08 09:51:22] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-10-08 09:51:22] ./pilot3/pilot/util/loggingsupport.py
[2025-10-08 09:51:22] ./pilot3/pilot/util/realtimelogger.py
[2025-10-08 09:51:22] ./pilot3/pilot/util/lokirealtimelogger.py
10:00:38 (134982): wrapper (7.7.26015): starting
10:00:38 (134982): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 10:00:38] Arguments: --nthreads 12
[2025-10-08 10:00:38] Threads: 12
[2025-10-08 10:00:38] This job has been restarted, cleaning up previous attempt
[2025-10-08 10:00:38] Checking for CVMFS
[2025-10-08 10:00:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 10:00:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 10:00:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 10:00:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 10:00:38] 2.13.2.0 5096 12 48300 151473 3 188 28623630 40960001 0 16776704 0 289061 99.993 2870 48644 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 10:00:38] CVMFS is ok
[2025-10-08 10:00:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 10:00:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 10:00:38] Further information can be found at the LHC@home message board.
[2025-10-08 10:00:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 10:00:38] Checking for apptainer binary...
[2025-10-08 10:00:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 10:00:38] Running /usr/bin/apptainer --version
[2025-10-08 10:00:38] apptainer version 1.4.2-1.el9
[2025-10-08 10:00:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 10:00:38] c-212-5.aglt2.org
[2025-10-08 10:00:38] apptainer works
[2025-10-08 10:00:39] Set ATHENA_PROC_NUMBER=12
[2025-10-08 10:00:39] Set ATHENA_CORE_NUMBER=12
[2025-10-08 10:00:39] Starting ATLAS job with PandaID=6829376182
[2025-10-08 10:00:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 12:48:10]  *** The last 200 lines of the pilot log: ***
[2025-10-08 12:48:10] 2025-10-08 16:47:27,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 12:48:10] 2025-10-08 16:47:27,721 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 12:48:10] 2025-10-08 16:47:27,721 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 12:48:10] 2025-10-08 16:47:27,725 | INFO     | fitting pss+swap vs Time
[2025-10-08 12:48:10] 2025-10-08 16:47:27,725 | INFO     | sum of square deviations: 1367551573.0975566
[2025-10-08 12:48:10] 2025-10-08 16:47:27,726 | INFO     | sum of deviations: 9272686096.207333
[2025-10-08 12:48:10] 2025-10-08 16:47:27,726 | INFO     | mean x: 1759937039.7195122
[2025-10-08 12:48:10] 2025-10-08 16:47:27,726 | INFO     | mean y: 2657981.0914634145
[2025-10-08 12:48:10] 2025-10-08 16:47:27,726 | INFO     | -- intersect: -11930598533.281502
[2025-10-08 12:48:10] 2025-10-08 16:47:27,726 | INFO     | intersect: -11930598533.281502
[2025-10-08 12:48:10] 2025-10-08 16:47:27,726 | INFO     | chi2: 1.9343269084711556
[2025-10-08 12:48:10] 2025-10-08 16:47:27,727 | INFO     | sum of square deviations: 1246239347.8490546
[2025-10-08 12:48:10] 2025-10-08 16:47:27,727 | INFO     | sum of deviations: 20691484401.773586
[2025-10-08 12:48:10] 2025-10-08 16:47:27,728 | INFO     | mean x: 1759936887.2264152
[2025-10-08 12:48:10] 2025-10-08 16:47:27,728 | INFO     | mean y: 2671959.672955975
[2025-10-08 12:48:10] 2025-10-08 16:47:27,728 | INFO     | -- intersect: -29217803796.45124
[2025-10-08 12:48:10] 2025-10-08 16:47:27,728 | INFO     | intersect: -29217803796.45124
[2025-10-08 12:48:10] 2025-10-08 16:47:27,728 | INFO     | chi2: 1.1038348985203628
[2025-10-08 12:48:10] 2025-10-08 16:47:27,728 | INFO     | current chi2=1.1038348985203628 (change=42.93441849533041 %)
[2025-10-08 12:48:10] 2025-10-08 16:47:27,728 | INFO     | sum of square deviations: 1132322610.084419
[2025-10-08 12:48:10] 2025-10-08 16:47:27,729 | INFO     | sum of deviations: 19809112100.79221
[2025-10-08 12:48:10] 2025-10-08 16:47:27,729 | INFO     | mean x: 1759936734.7337663
[2025-10-08 12:48:10] 2025-10-08 16:47:27,729 | INFO     | mean y: 2670778.116883117
[2025-10-08 12:48:10] 2025-10-08 16:47:27,729 | INFO     | -- intersect: -30786067129.39891
[2025-10-08 12:48:10] 2025-10-08 16:47:27,729 | INFO     | intersect: -30786067129.39891
[2025-10-08 12:48:10] 2025-10-08 16:47:27,729 | INFO     | chi2: 1.1046672157989916
[2025-10-08 12:48:10] 2025-10-08 16:47:27,730 | INFO     | current chi2=1.1046672157989916 (change=-0.07540233414839032 %)
[2025-10-08 12:48:10] 2025-10-08 16:47:27,730 | INFO     | right removable region: 153
[2025-10-08 12:48:10] 2025-10-08 16:47:27,730 | INFO     | sum of square deviations: 1246217387.8490546
[2025-10-08 12:48:10] 2025-10-08 16:47:27,730 | INFO     | sum of deviations: -7952071910.433964
[2025-10-08 12:48:10] 2025-10-08 16:47:27,731 | INFO     | mean x: 1759937192.2264152
[2025-10-08 12:48:10] 2025-10-08 16:47:27,731 | INFO     | mean y: 2679174.4842767296
[2025-10-08 12:48:10] 2025-10-08 16:47:27,731 | INFO     | -- intersect: 11232780155.97277
[2025-10-08 12:48:10] 2025-10-08 16:47:27,731 | INFO     | intersect: 11232780155.97277
[2025-10-08 12:48:10] 2025-10-08 16:47:27,731 | INFO     | chi2: 0.8531075542047921
[2025-10-08 12:48:10] 2025-10-08 16:47:27,731 | INFO     | current chi2=0.8531075542047921 (change=55.89641283132087 %)
[2025-10-08 12:48:10] 2025-10-08 16:47:27,731 | INFO     | sum of square deviations: 1132278690.084419
[2025-10-08 12:48:10] 2025-10-08 16:47:27,732 | INFO     | sum of deviations: -8434990455.831169
[2025-10-08 12:48:10] 2025-10-08 16:47:27,732 | INFO     | mean x: 1759937344.7337663
[2025-10-08 12:48:10] 2025-10-08 16:47:27,732 | INFO     | mean y: 2679817.4675324676
[2025-10-08 12:48:10] 2025-10-08 16:47:27,732 | INFO     | -- intersect: 13113457963.953157
[2025-10-08 12:48:10] 2025-10-08 16:47:27,732 | INFO     | intersect: 13113457963.953157
[2025-10-08 12:48:10] 2025-10-08 16:47:27,732 | INFO     | chi2: 0.8532120060342182
[2025-10-08 12:48:10] 2025-10-08 16:47:27,733 | INFO     | current chi2=0.8532120060342182 (change=-0.012243688256101724 %)
[2025-10-08 12:48:10] 2025-10-08 16:47:27,733 | INFO     | left removable region: 20
[2025-10-08 12:48:10] 2025-10-08 16:47:27,733 | INFO     | sum of square deviations: 729294724.2556405
[2025-10-08 12:48:10] 2025-10-08 16:47:27,733 | INFO     | sum of deviations: 1783038332.992481
[2025-10-08 12:48:10] 2025-10-08 16:47:27,733 | INFO     | mean x: 1759937314.2706766
[2025-10-08 12:48:10] 2025-10-08 16:47:27,734 | INFO     | mean y: 2696101.639097744
[2025-10-08 12:48:10] 2025-10-08 16:47:27,734 | INFO     | -- intersect: -4300140036.674268
[2025-10-08 12:48:10] 2025-10-08 16:47:27,734 | INFO     | intersect: -4300140036.674268
[2025-10-08 12:48:10] 2025-10-08 16:47:27,734 | INFO     | chi2: 0.0005859926898774887
[2025-10-08 12:48:10] 2025-10-08 16:47:27,734 | INFO     | -- intersect: -4300140036.674268
[2025-10-08 12:48:10] 2025-10-08 16:47:27,734 | INFO     | current memory leak: 2.44 B/s (using 133 data points, chi2=0.00)
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | could have reported an average CPU frequency of 3021 MHz (9 samples)
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | ..............................
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | . Timing measurements:
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | . get job = 0 s
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | . initial setup = 0 s
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | . payload setup = 4 s
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | . stage-in = 0 s
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | . payload execution = 9969 s
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | . stage-out = 0 s
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | . log creation = 0 s
[2025-10-08 12:48:10] 2025-10-08 16:47:27,735 | INFO     | ..............................
[2025-10-08 12:48:10] 2025-10-08 16:47:27,818 | INFO     | 
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | job summary report
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | --------------------------------------------------
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | PanDA job id: 6829376182
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | task id: 46376905
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | errors: (none)
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | pilot state: finished 
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | transexitcode: 0
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | exeerrorcode: 0
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | exeerrordiag: 
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | exitcode: 0
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | exitmsg: OK
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | cpuconsumptiontime: 28770 s
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | nevents: 400
[2025-10-08 12:48:10] 2025-10-08 16:47:27,819 | INFO     | neventsw: 0
[2025-10-08 12:48:10] 2025-10-08 16:47:27,820 | INFO     | pid: 195422
[2025-10-08 12:48:10] 2025-10-08 16:47:27,820 | INFO     | pgrp: 195422
[2025-10-08 12:48:10] 2025-10-08 16:47:27,820 | INFO     | corecount: 12
[2025-10-08 12:48:10] 2025-10-08 16:47:27,820 | INFO     | event service: False
[2025-10-08 12:48:10] 2025-10-08 16:47:27,820 | INFO     | sizes: {0: 2347987, 1: 2348843, 4: 2349105, 11: 2349133, 9977: 2377738, 9978: 2386920, 9988: 2387122}
[2025-10-08 12:48:10] 2025-10-08 16:47:27,820 | INFO     | --------------------------------------------------
[2025-10-08 12:48:10] 2025-10-08 16:47:27,820 | INFO     | 
[2025-10-08 12:48:10] 2025-10-08 16:47:27,820 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 12:48:10] 2025-10-08 16:47:27,848 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,848 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,850 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 12:48:10] 2025-10-08 16:47:27,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,850 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 12:48:10] 2025-10-08 16:47:27,850 | INFO     | job 6829376182 has completed (purged errors)
[2025-10-08 12:48:10] 2025-10-08 16:47:27,850 | INFO     | overall cleanup function is called
[2025-10-08 12:48:10] 2025-10-08 16:47:28,863 | INFO     | --- collectZombieJob: --- 10, [195422]
[2025-10-08 12:48:10] 2025-10-08 16:47:28,863 | INFO     | zombie collector waiting for pid 195422
[2025-10-08 12:48:10] 2025-10-08 16:47:28,864 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 12:48:10] 2025-10-08 16:47:28,864 | INFO     | collected zombie processes
[2025-10-08 12:48:10] 2025-10-08 16:47:28,864 | INFO     | will attempt to kill all subprocesses of pid=195422
[2025-10-08 12:48:10] 2025-10-08 16:47:29,213 | INFO     | process IDs to be killed: [195422] (in reverse order)
[2025-10-08 12:48:10] 2025-10-08 16:47:29,343 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 12:48:10] 2025-10-08 16:47:29,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 12:48:10] 2025-10-08 16:47:29,356 | INFO     | did not find any defunct processes belonging to 195422
[2025-10-08 12:48:10] 2025-10-08 16:47:29,371 | INFO     | did not find any defunct processes belonging to 195422
[2025-10-08 12:48:10] 2025-10-08 16:47:29,371 | INFO     | ready for new job
[2025-10-08 12:48:10] 2025-10-08 16:47:29,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 12:48:10] 2025-10-08 16:47:29,373 | INFO     | ***************************************
[2025-10-08 12:48:10] 2025-10-08 16:47:29,374 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 12:48:10] 2025-10-08 16:47:29,374 | INFO     | ***************************************
[2025-10-08 12:48:10] 2025-10-08 16:47:29,374 | INFO     | 
[2025-10-08 12:48:10] 2025-10-08 16:47:29,379 | INFO     | architecture information:
[2025-10-08 12:48:10] 2025-10-08 16:47:29,379 | INFO     | executing command: cat /etc/os-release
[2025-10-08 12:48:10] 2025-10-08 16:47:29,398 | INFO     | cat /etc/os-release:
[2025-10-08 12:48:10] NAME="CentOS Linux"
[2025-10-08 12:48:10] VERSION="7 (Core)"
[2025-10-08 12:48:10] ID="centos"
[2025-10-08 12:48:10] ID_LIKE="rhel fedora"
[2025-10-08 12:48:10] VERSION_ID="7"
[2025-10-08 12:48:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 12:48:10] ANSI_COLOR="0;31"
[2025-10-08 12:48:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 12:48:10] HOME_URL="https://www.centos.org/"
[2025-10-08 12:48:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 12:48:10] 
[2025-10-08 12:48:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 12:48:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 12:48:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 12:48:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 12:48:10] 
[2025-10-08 12:48:10] 2025-10-08 16:47:29,398 | INFO     | ***************************************
[2025-10-08 12:48:10] 2025-10-08 16:47:29,901 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 12:48:10] 2025-10-08 16:47:29,933 | INFO     | sufficient remaining disk space (129383792640 B)
[2025-10-08 12:48:10] 2025-10-08 16:47:29,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 12:48:10] 2025-10-08 16:47:29,934 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 12:48:10] 2025-10-08 16:47:29,934 | INFO     | update_server=False
[2025-10-08 12:48:10] 2025-10-08 16:47:29,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 12:48:10] 2025-10-08 16:47:29,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 12:48:10] 2025-10-08 16:47:29,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 12:48:10] 2025-10-08 16:47:30,071 | INFO     | all payload control threads have been joined
[2025-10-08 12:48:10] 2025-10-08 16:47:30,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 12:48:10] 2025-10-08 16:47:30,119 | INFO     | aborting loop
[2025-10-08 12:48:10] 2025-10-08 16:47:30,787 | INFO     | all data control threads have been joined
[2025-10-08 12:48:10] 2025-10-08 16:47:30,940 | INFO     | [job] retrieve thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,087 | INFO     | [payload] control thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,124 | INFO     | [job] job monitor thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,162 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,189 | INFO     | all job control threads have been joined
[2025-10-08 12:48:10] 2025-10-08 16:47:31,253 | INFO     | [payload] validate_post thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,352 | INFO     | [payload] failed_post thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,756 | INFO     | [data] copytool_in thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,764 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,765 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,796 | INFO     | [data] control thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,936 | INFO     | [job] validate thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:31,948 | INFO     | [data] copytool_out thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:32,195 | INFO     | [job] control thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:32,344 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:32,829 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 12:48:10] 2025-10-08 16:47:33,834 | INFO     | [job] queue monitor thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:47:33,955 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 12:48:10] 2025-10-08 16:48:01,445 | INFO     | PID=157115 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-08 12:48:10] 2025-10-08 16:48:01,445 | INFO     | .. there are 14 such processes running
[2025-10-08 12:48:10] 2025-10-08 16:48:01,446 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 12:48:10] 2025-10-08 16:48:01,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 12:48:10] 2025-10-08 16:48:01,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 12:48:10] 2025-10-08 16:48:03,463 | INFO     | [monitor] cgroup control has ended
[2025-10-08 12:48:10] 2025-10-08 16:48:03,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052211210048)>', '<ExcThread(monitor, started 140051853842176)>']
[2025-10-08 12:48:10] 2025-10-08 16:48:04,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 12:48:10] 2025-10-08 16:48:04,476 | INFO     | [monitor] control thread has ended
[2025-10-08 12:48:10] 2025-10-08 16:48:08,720 | INFO     | all workflow threads have been joined
[2025-10-08 12:48:10] 2025-10-08 16:48:08,720 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 12:48:10] 2025-10-08 16:48:08,721 | INFO     | traces error code: 0
[2025-10-08 12:48:10] 2025-10-08 16:48:08,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 12:48:10] 2025-10-08 16:48:10,003 [wrapper] ==== pilot stdout END ====
[2025-10-08 12:48:10] 2025-10-08 16:48:10,007 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 12:48:10] 2025-10-08 16:48:10,010 [wrapper] pilotpid: 157115
[2025-10-08 12:48:10] 2025-10-08 16:48:10,017 [wrapper] Pilot exit status: 0
[2025-10-08 12:48:10] 2025-10-08 16:48:10,041 [wrapper] pandaids: 6829376182 6829376182 6829376182
[2025-10-08 12:48:10] 2025-10-08 16:48:10,151 [wrapper] cleanup supervisor_pilot  769051 157118
[2025-10-08 12:48:10] 2025-10-08 16:48:10,172 [wrapper] Test setup, not cleaning
[2025-10-08 12:48:10] 2025-10-08 16:48:10,180 [wrapper] apfmon messages muted
[2025-10-08 12:48:10] 2025-10-08 16:48:10,184 [wrapper] ==== wrapper stdout END ====
[2025-10-08 12:48:10] 2025-10-08 16:48:10,199 [wrapper] ==== wrapper stderr END ====
[2025-10-08 12:48:10]  *** Error codes and diagnostics ***
[2025-10-08 12:48:10]     "exeErrorCode": 0,
[2025-10-08 12:48:10]     "exeErrorDiag": "",
[2025-10-08 12:48:10]     "pilotErrorCode": 0,
[2025-10-08 12:48:10]     "pilotErrorDiag": "",
[2025-10-08 12:48:10]  *** Listing of results directory ***
[2025-10-08 12:48:10] total 594928
[2025-10-08 12:48:10] drwx------. 4 boincer umatlas      4096 Jul 31 09:00 pilot3
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 03:03 pilot3.tar.gz
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 03:08 queuedata.json
[2025-10-08 12:48:10] -rwx------. 1 boincer umatlas     36292 Oct  4 03:10 runpilot2-wrapper.sh
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas       100 Oct  7 12:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 12:48:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  7 12:06 run_atlas
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas       105 Oct  7 12:06 job.xml
[2025-10-08 12:48:10] -rw-r--r--. 3 boincer umatlas 212043519 Oct  7 12:06 EVNT.46376901._001954.pool.root.1
[2025-10-08 12:48:10] -rw-r--r--. 3 boincer umatlas 212043519 Oct  7 12:06 ATLAS.root_0
[2025-10-08 12:48:10] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 12:06 start_atlas.sh
[2025-10-08 12:48:10] -rw-r--r--. 2 boincer umatlas    565600 Oct  7 12:06 input.tar.gz
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas         0 Oct  7 12:06 boinc_lockfile
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas         0 Oct  8 09:48 wrapper_sigint_24750
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas   1560401 Oct  8 09:48 agis_ddmendpoints.agis.ALL.json
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas         0 Oct  8 09:51 wrapper_sigkill_24750
[2025-10-08 12:48:10] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 09:51 shared
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas      2518 Oct  8 10:00 pandaJob.out
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas    979369 Oct  8 10:00 agis_schedconf.cvmfs.json
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas      6946 Oct  8 12:46 init_data.xml
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas 177648310 Oct  8 12:46 HITS.46376905._054805.pool.root.1
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas       531 Oct  8 12:46 boinc_task_state.xml
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas      1042 Oct  8 12:47 memory_monitor_summary.json
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas    465224 Oct  8 12:47 log.46376905._054805.job.log.tgz.1
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas      7793 Oct  8 12:47 heartbeat.json
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas        98 Oct  8 12:48 pilot_heartbeat.json
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas        28 Oct  8 12:48 wrapper_checkpoint.txt
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas      4824 Oct  8 12:48 pilotlog.txt
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas   1322852 Oct  8 12:48 log.46376905._054805.job.log.1
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas       357 Oct  8 12:48 output.list
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas       620 Oct  8 12:48 runtime_log
[2025-10-08 12:48:10] -rw-r--r--. 2 boincer umatlas   1812480 Oct  8 12:48 result.tar.gz
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas      8786 Oct  8 12:48 runtime_log.err
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas      1388 Oct  8 12:48 p3lNDmUaBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDZKNDm6836dn.diag
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas     19453 Oct  8 12:48 stderr.txt
[2025-10-08 12:48:10] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 12:48 boinc_mmap_file
[2025-10-08 12:48:10] HITS file was successfully produced:
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas 177648310 Oct  8 12:46 shared/HITS.pool.root.1
[2025-10-08 12:48:10]  *** Contents of shared directory: ***
[2025-10-08 12:48:10] total 382912
[2025-10-08 12:48:10] -rw-r--r--. 3 boincer umatlas 212043519 Oct  7 12:06 ATLAS.root_0
[2025-10-08 12:48:10] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 12:06 start_atlas.sh
[2025-10-08 12:48:10] -rw-r--r--. 2 boincer umatlas    565600 Oct  7 12:06 input.tar.gz
[2025-10-08 12:48:10] -rw-------. 1 boincer umatlas 177648310 Oct  8 12:46 HITS.pool.root.1
[2025-10-08 12:48:10] -rw-r--r--. 2 boincer umatlas   1812480 Oct  8 12:48 result.tar.gz
12:48:12 (134982): run_atlas exited; CPU time 29100.256947
12:48:12 (134982): called boinc_finish(0)

</stderr_txt>
]]>


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