Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:51:01 (1623835): wrapper (7.7.26015): starting
23:51:01 (1623835): wrapper: running run_atlas (--nthreads 4)
[2025-10-07 23:51:01] Arguments: --nthreads 4
[2025-10-07 23:51:01] Threads: 4
[2025-10-07 23:51:01] Checking for CVMFS
[2025-10-07 23:51:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 23:51:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 23:51:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 23:51:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 23:51:01] 2.9.2.0 832696 2039 93308 151448 1 57 28418799 36864000 0 130560 0 2072593 99.993 69594 1024 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-07 23:51:01] CVMFS is ok
[2025-10-07 23:51:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 23:51:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 23:51:01] Further information can be found at the LHC@home message board.
[2025-10-07 23:51:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 23:51:01] Checking for apptainer binary...
[2025-10-07 23:51:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 23:51:01] Running /usr/bin/apptainer --version
[2025-10-07 23:51:01] apptainer version 1.4.1-1.1
[2025-10-07 23:51:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 23:51:01] thA375a
[2025-10-07 23:51:01] apptainer works
[2025-10-07 23:51:01] Set ATHENA_PROC_NUMBER=4
[2025-10-07 23:51:01] Set ATHENA_CORE_NUMBER=4
[2025-10-07 23:51:01] Starting ATLAS job with PandaID=6833172206
[2025-10-07 23:51:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 00:54:42]  *** The last 200 lines of the pilot log: ***
[2025-10-08 00:54:42] 2025-10-07 22:54:10,582 | INFO     | will attempt to kill all subprocesses of pid=1634184
[2025-10-08 00:54:42] 2025-10-07 22:54:10,626 | INFO     | process IDs to be killed: [1634184] (in reverse order)
[2025-10-08 00:54:42] 2025-10-07 22:54:10,659 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 00:54:42] 2025-10-07 22:54:10,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 00:54:42] 2025-10-07 22:54:10,661 | INFO     | did not find any defunct processes belonging to 1634184
[2025-10-08 00:54:42] 2025-10-07 22:54:10,662 | INFO     | did not find any defunct processes belonging to 1634184
[2025-10-08 00:54:42] 2025-10-07 22:54:10,662 | INFO     | ready for new job
[2025-10-08 00:54:42] 2025-10-07 22:54:10,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 00:54:42] 2025-10-07 22:54:10,663 | INFO     | ***************************************
[2025-10-08 00:54:42] 2025-10-07 22:54:10,663 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 00:54:42] 2025-10-07 22:54:10,663 | INFO     | ***************************************
[2025-10-08 00:54:42] 2025-10-07 22:54:10,663 | INFO     | 
[2025-10-08 00:54:42] 2025-10-07 22:54:10,664 | INFO     | architecture information:
[2025-10-08 00:54:42] 2025-10-07 22:54:10,664 | INFO     | executing command: cat /etc/os-release
[2025-10-08 00:54:42] 2025-10-07 22:54:10,678 | INFO     | cat /etc/os-release:
[2025-10-08 00:54:42] NAME="CentOS Linux"
[2025-10-08 00:54:42] VERSION="7 (Core)"
[2025-10-08 00:54:42] ID="centos"
[2025-10-08 00:54:42] ID_LIKE="rhel fedora"
[2025-10-08 00:54:42] VERSION_ID="7"
[2025-10-08 00:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 00:54:42] ANSI_COLOR="0;31"
[2025-10-08 00:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 00:54:42] HOME_URL="https://www.centos.org/"
[2025-10-08 00:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 00:54:42] 
[2025-10-08 00:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 00:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 00:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 00:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 00:54:42] 
[2025-10-08 00:54:42] 2025-10-07 22:54:10,678 | INFO     | ***************************************
[2025-10-08 00:54:42] 2025-10-07 22:54:11,181 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-08 00:54:42] 2025-10-07 22:54:11,200 | INFO     | sufficient remaining disk space (232258535424 B)
[2025-10-08 00:54:42] 2025-10-07 22:54:11,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 00:54:42] 2025-10-07 22:54:11,200 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 00:54:42] 2025-10-07 22:54:11,201 | INFO     | update_server=False
[2025-10-08 00:54:42] 2025-10-07 22:54:11,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 00:54:42] 2025-10-07 22:54:11,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 00:54:42] 2025-10-07 22:54:11,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 00:54:42] 2025-10-07 22:54:11,416 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 00:54:42] 2025-10-07 22:54:11,416 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 00:54:42] 2025-10-07 22:54:11,416 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 00:54:42] 2025-10-07 22:54:11,416 | INFO     | will abort loop
[2025-10-08 00:54:42] 2025-10-07 22:54:11,464 | INFO     | all job control threads have been joined
[2025-10-08 00:54:42] 2025-10-07 22:54:11,611 | INFO     | all payload control threads have been joined
[2025-10-08 00:54:42] 2025-10-07 22:54:11,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 00:54:42] 2025-10-07 22:54:12,121 | INFO     | all data control threads have been joined
[2025-10-08 00:54:42] 2025-10-07 22:54:12,206 | INFO     | [job] queue monitor thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:12,207 | INFO     | [job] retrieve thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:12,268 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:12,370 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:12,422 | INFO     | [job] job monitor thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:12,443 | INFO     | [payload] validate_post thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:12,470 | INFO     | [job] control thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:12,617 | INFO     | [payload] control thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:12,674 | INFO     | [payload] failed_post thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:12,836 | INFO     | [data] copytool_in thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:13,127 | INFO     | [data] control thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:13,330 | INFO     | [data] copytool_out thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:13,499 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:13,590 | INFO     | [job] validate thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:13,695 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:14,532 | INFO     | [monitor] cgroup control has ended
[2025-10-08 00:54:42] 2025-10-07 22:54:15,866 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 00:54:42] 2025-10-07 22:54:16,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899624351552)>', '<ExcThread(monitor, started 139898560444160)>']
[2025-10-08 00:54:42] 2025-10-07 22:54:21,763 | INFO     | all workflow threads have been joined
[2025-10-08 00:54:42] 2025-10-07 22:54:21,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 00:54:42] 2025-10-07 22:54:21,763 | INFO     | traces error code: 0
[2025-10-08 00:54:42] 2025-10-07 22:54:21,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 00:54:42] 2025-10-07 22:54:42,075 | INFO     | PID=1627618 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 00:54:42] 2025-10-07 22:54:42,075 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 00:54:42] 2025-10-07 22:54:42,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 00:54:42] 2025-10-07 22:54:42,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 00:54:42] 2025-10-07 22:54:42,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 00:54:42] 2025-10-07 22:54:42,076 | INFO     | [monitor] control thread has ended
[2025-10-08 00:54:42] 2025-10-07 22:54:42,151 [wrapper] ==== pilot stdout END ====
[2025-10-08 00:54:42] 2025-10-07 22:54:42,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 00:54:42] 2025-10-07 22:54:42,159 [wrapper] pilotpid: 1627618
[2025-10-08 00:54:42] 2025-10-07 22:54:42,163 [wrapper] Pilot exit status: 0
[2025-10-08 00:54:42] 2025-10-07 22:54:42,174 [wrapper] pandaids: 6833172206
[2025-10-08 00:54:42] 2025-10-07 22:54:42,197 [wrapper] cleanup supervisor_pilot 1644115 1627619
[2025-10-08 00:54:42] 2025-10-07 22:54:42,201 [wrapper] Test setup, not cleaning
[2025-10-08 00:54:42] 2025-10-07 22:54:42,205 [wrapper] apfmon messages muted
[2025-10-08 00:54:42] 2025-10-07 22:54:42,209 [wrapper] ==== wrapper stdout END ====
[2025-10-08 00:54:42] 2025-10-07 22:54:42,213 [wrapper] ==== wrapper stderr END ====
[2025-10-08 00:54:42]  *** Error codes and diagnostics ***
[2025-10-08 00:54:42]     "exeErrorCode": 0,
[2025-10-08 00:54:42]     "exeErrorDiag": "",
[2025-10-08 00:54:42]     "pilotErrorCode": 0,
[2025-10-08 00:54:42]     "pilotErrorDiag": "",
[2025-10-08 00:54:42]  *** Listing of results directory ***
[2025-10-08 00:54:42] total 387072
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc    552446 Oct  7 08:32 pilot3.tar.gz
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc      5112 Oct  7 08:41 queuedata.json
[2025-10-08 00:54:42] -rwx------ 1 boinc boinc     36292 Oct  7 08:41 runpilot2-wrapper.sh
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc       100 Oct  7 23:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 00:54:42] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 23:51 run_atlas
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc       105 Oct  7 23:51 job.xml
[2025-10-08 00:54:42] -rw-r--r-- 2 boinc boinc 214222040 Oct  7 23:51 EVNT.46376901._004839.pool.root.1
[2025-10-08 00:54:42] -rw-r--r-- 2 boinc boinc    565604 Oct  7 23:51 input.tar.gz
[2025-10-08 00:54:42] -rw-r--r-- 2 boinc boinc     15120 Oct  7 23:51 start_atlas.sh
[2025-10-08 00:54:42] drwxrwx--x 2 boinc boinc      4096 Oct  7 23:51 shared
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc         0 Oct  7 23:51 boinc_setup_complete
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc      6378 Oct  7 23:51 init_data.xml
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc         0 Oct  7 23:51 boinc_lockfile
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc      2521 Oct  7 23:51 pandaJob.out
[2025-10-08 00:54:42] -rw------- 1 boinc boinc    979849 Oct  7 23:51 agis_schedconf.cvmfs.json
[2025-10-08 00:54:42] -rw------- 1 boinc boinc   1560401 Oct  7 23:51 agis_ddmendpoints.agis.ALL.json
[2025-10-08 00:54:42] drwx------ 4 boinc boinc      4096 Oct  7 23:51 pilot3
[2025-10-08 00:54:42] -rw------- 1 boinc boinc 176620688 Oct  8 00:53 HITS.46376905._129924.pool.root.1
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc       529 Oct  8 00:53 boinc_task_state.xml
[2025-10-08 00:54:42] -rw------- 1 boinc boinc      1032 Oct  8 00:54 memory_monitor_summary.json
[2025-10-08 00:54:42] -rw------- 1 boinc boinc    251980 Oct  8 00:54 log.46376905._129924.job.log.tgz.1
[2025-10-08 00:54:42] -rw------- 1 boinc boinc      7758 Oct  8 00:54 heartbeat.json
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc        27 Oct  8 00:54 wrapper_checkpoint.txt
[2025-10-08 00:54:42] -rw------- 1 boinc boinc       747 Oct  8 00:54 pilotlog.txt
[2025-10-08 00:54:42] -rw------- 1 boinc boinc        95 Oct  8 00:54 pilot_heartbeat.json
[2025-10-08 00:54:42] -rw------- 1 boinc boinc    565402 Oct  8 00:54 log.46376905._129924.job.log.1
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc      8192 Oct  8 00:54 boinc_mmap_file
[2025-10-08 00:54:42] -rw------- 1 boinc boinc       357 Oct  8 00:54 output.list
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc       620 Oct  8 00:54 runtime_log
[2025-10-08 00:54:42] -rw------- 1 boinc boinc    839680 Oct  8 00:54 result.tar.gz
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc      8782 Oct  8 00:54 runtime_log.err
[2025-10-08 00:54:42] -rw------- 1 boinc boinc       659 Oct  8 00:54 j7FKDm7YGQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmMWNDmzgnBPn.diag
[2025-10-08 00:54:42] -rw-r--r-- 1 boinc boinc     10425 Oct  8 00:54 stderr.txt
[2025-10-08 00:54:42] HITS file was successfully produced:
[2025-10-08 00:54:42] -rw------- 1 boinc boinc 176620688 Oct  8 00:53 shared/HITS.pool.root.1
[2025-10-08 00:54:42]  *** Contents of shared directory: ***
[2025-10-08 00:54:42] total 383088
[2025-10-08 00:54:42] -rw-r--r-- 2 boinc boinc 214222040 Oct  7 23:51 ATLAS.root_0
[2025-10-08 00:54:42] -rw-r--r-- 2 boinc boinc    565604 Oct  7 23:51 input.tar.gz
[2025-10-08 00:54:42] -rw-r--r-- 2 boinc boinc     15120 Oct  7 23:51 start_atlas.sh
[2025-10-08 00:54:42] -rw------- 1 boinc boinc 176620688 Oct  8 00:53 HITS.pool.root.1
[2025-10-08 00:54:42] -rw------- 1 boinc boinc    839680 Oct  8 00:54 result.tar.gz
00:55:04 (1623835): run_atlas exited; CPU time 14006.041943
00:55:04 (1623835): called boinc_finish(0)

</stderr_txt>
]]>

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