Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:04:50 (19081): wrapper (7.7.26015): starting
10:04:50 (19081): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 10:04:50] Arguments: --nthreads 12
[2025-10-07 10:04:50] Threads: 12
[2025-10-07 10:04:50] Checking for CVMFS
[2025-10-07 10:04:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 10:04:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 10:04:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 10:04:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 10:04:50] 2.11.2.0 2947 215732 98200 151435 1 56 17865792 20275201 1 130560 1 102703990 99.983 13050147 11063 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 10:04:50] CVMFS is ok
[2025-10-07 10:04:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 10:04:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 10:04:50] Further information can be found at the LHC@home message board.
[2025-10-07 10:04:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 10:04:50] Checking for apptainer binary...
[2025-10-07 10:04:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 10:04:50] Running /usr/bin/apptainer --version
[2025-10-07 10:04:50] apptainer version 1.3.2-1.el7
[2025-10-07 10:04:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 10:04:52] c-205-18.aglt2.org
[2025-10-07 10:04:52] apptainer works
[2025-10-07 10:04:52] Set ATHENA_PROC_NUMBER=12
[2025-10-07 10:04:52] Set ATHENA_CORE_NUMBER=12
[2025-10-07 10:04:52] Starting ATLAS job with PandaID=6833170350
[2025-10-07 10:04:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 11:10:21]  *** The last 200 lines of the pilot log: ***
[2025-10-07 11:10:21]  replicas=None
[2025-10-07 11:10:21]  scope=mc23_13p6TeV
[2025-10-07 11:10:21]  status=None
[2025-10-07 11:10:21]  status_code=0
[2025-10-07 11:10:21]  storage_token=
[2025-10-07 11:10:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6833170350/log.46376905._129270.job.log.tgz.1
[2025-10-07 11:10:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/1e/log.46376905._129270.job.log.tgz.1
[2025-10-07 11:10:21]  workdir=None
[2025-10-07 11:10:21] ]
[2025-10-07 11:10:21] 2025-10-07 15:09:41,839 | INFO     | transferring file log.46376905._129270.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6833170350/log.46376905._129270.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-07 11:10:21] 2025-10-07 15:09:41,839 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6833170350/log.46376905._129270.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._129270.job
[2025-10-07 11:10:21] 2025-10-07 15:09:41,862 | INFO     | adding to output.list: log.46376905._129270.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/1e/log.46376905._129270.job.log.tg
[2025-10-07 11:10:21] 2025-10-07 15:09:41,863 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 11:10:21] 2025-10-07 15:09:41,863 | INFO     | summary of transferred files:
[2025-10-07 11:10:21] 2025-10-07 15:09:41,863 | INFO     |  -- lfn=log.46376905._129270.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 11:10:21] 2025-10-07 15:09:41,864 | INFO     | stage-out finished correctly
[2025-10-07 11:10:21] 2025-10-07 15:09:42,022 | INFO     | time since job start (3875s) is within the limit (172800.0s)
[2025-10-07 11:10:21] 2025-10-07 15:09:42,677 | INFO     | monitor loop #290: job 0:6833170350 is in state 'finished'
[2025-10-07 11:10:21] 2025-10-07 15:09:42,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 11:10:21] 2025-10-07 15:09:43,286 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 11:10:21] 2025-10-07 15:09:44,028 | INFO     | time since job start (3877s) is within the limit (172800.0s)
[2025-10-07 11:10:21] 2025-10-07 15:09:44,172 | INFO     | job 6833170350 has state=finished
[2025-10-07 11:10:21] 2025-10-07 15:09:44,172 | INFO     | preparing for final server update for job 6833170350 in state='finished'
[2025-10-07 11:10:21] 2025-10-07 15:09:44,173 | INFO     | this job has now completed (state=finished)
[2025-10-07 11:10:21] 2025-10-07 15:09:44,173 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 11:10:21] 2025-10-07 15:09:44,173 | INFO     | log transfer has been attempted: DONE
[2025-10-07 11:10:21] 2025-10-07 15:09:44,173 | INFO     | job 6833170350 has finished - writing final server update
[2025-10-07 11:10:21] 2025-10-07 15:09:44,174 | INFO     | total number of processed events: 400 (read)
[2025-10-07 11:10:21] 2025-10-07 15:09:44,175 | INFO     | executing command: lscpu
[2025-10-07 11:10:21] 2025-10-07 15:09:44,202 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 11:10:21] 2025-10-07 15:09:45,180 | INFO     | monitor loop #291: job 0:6833170350 is in state 'finished'
[2025-10-07 11:10:21] 2025-10-07 15:09:45,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 11:10:21] 2025-10-07 15:09:46,033 | INFO     | time since job start (3879s) is within the limit (172800.0s)
[2025-10-07 11:10:21] 2025-10-07 15:09:47,153 | INFO     | PID=23235 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 11:10:21] 2025-10-07 15:09:47,683 | INFO     | monitor loop #292: job 0:6833170350 is in state 'finished'
[2025-10-07 11:10:21] 2025-10-07 15:09:47,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 11:10:21] 2025-10-07 15:09:48,153 | INFO     | time since job start (3881s) is within the limit (172800.0s)
[2025-10-07 11:10:21] 2025-10-07 15:09:48,843 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-07 11:10:21] 2025-10-07 15:09:48,847 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-10-07 11:10:21] 2025-10-07 15:09:48,849 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6833170350/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 11:10:21] 2025-10-07 15:09:48,850 | INFO     | extracted standard info from prmon json
[2025-10-07 11:10:21] 2025-10-07 15:09:48,850 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 11:10:21] 2025-10-07 15:09:48,850 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 11:10:21] 2025-10-07 15:09:48,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 11:10:21] 2025-10-07 15:09:48,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 11:10:21] 2025-10-07 15:09:48,852 | INFO     | fitting pss+swap vs Time
[2025-10-07 11:10:21] 2025-10-07 15:09:48,852 | INFO     | sum of square deviations: 54438230.0
[2025-10-07 11:10:21] 2025-10-07 15:09:48,852 | INFO     | sum of deviations: 1828869304.0
[2025-10-07 11:10:21] 2025-10-07 15:09:48,852 | INFO     | mean x: 1759847918.5
[2025-10-07 11:10:21] 2025-10-07 15:09:48,852 | INFO     | mean y: 2700729.285714286
[2025-10-07 11:10:21] 2025-10-07 15:09:48,853 | INFO     | -- intersect: -59119938597.02861
[2025-10-07 11:10:21] 2025-10-07 15:09:48,853 | INFO     | intersect: -59119938597.02861
[2025-10-07 11:10:21] 2025-10-07 15:09:48,853 | INFO     | chi2: 0.04457683665601073
[2025-10-07 11:10:21] 2025-10-07 15:09:48,853 | INFO     | -- intersect: -59119938597.02861
[2025-10-07 11:10:21] 2025-10-07 15:09:48,853 | INFO     | current memory leak: 33.60 B/s (using 56 data points, chi2=0.04)
[2025-10-07 11:10:21] 2025-10-07 15:09:48,853 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-10-07 11:10:21] 2025-10-07 15:09:48,854 | INFO     | ..............................
[2025-10-07 11:10:21] 2025-10-07 15:09:48,854 | INFO     | . Timing measurements:
[2025-10-07 11:10:21] 2025-10-07 15:09:48,854 | INFO     | . get job = 0 s
[2025-10-07 11:10:21] 2025-10-07 15:09:48,854 | INFO     | . initial setup = 2 s
[2025-10-07 11:10:21] 2025-10-07 15:09:48,854 | INFO     | . payload setup = 7 s
[2025-10-07 11:10:21] 2025-10-07 15:09:48,854 | INFO     | . stage-in = 0 s
[2025-10-07 11:10:21] 2025-10-07 15:09:48,854 | INFO     | . payload execution = 3844 s
[2025-10-07 11:10:21] 2025-10-07 15:09:48,854 | INFO     | . stage-out = 0 s
[2025-10-07 11:10:21] 2025-10-07 15:09:48,854 | INFO     | . log creation = 0 s
[2025-10-07 11:10:21] 2025-10-07 15:09:48,854 | INFO     | ..............................
[2025-10-07 11:10:21] 2025-10-07 15:09:49,317 | INFO     | 
[2025-10-07 11:10:21] 2025-10-07 15:09:49,318 | INFO     | job summary report
[2025-10-07 11:10:21] 2025-10-07 15:09:49,326 | INFO     | --------------------------------------------------
[2025-10-07 11:10:21] 2025-10-07 15:09:49,326 | INFO     | PanDA job id: 6833170350
[2025-10-07 11:10:21] 2025-10-07 15:09:49,326 | INFO     | task id: 46376905
[2025-10-07 11:10:21] 2025-10-07 15:09:49,326 | INFO     | errors: (none)
[2025-10-07 11:10:21] 2025-10-07 15:09:49,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 11:10:21] 2025-10-07 15:09:49,327 | INFO     | pilot state: finished 
[2025-10-07 11:10:21] 2025-10-07 15:09:49,327 | INFO     | transexitcode: 0
[2025-10-07 11:10:21] 2025-10-07 15:09:49,327 | INFO     | exeerrorcode: 0
[2025-10-07 11:10:21] 2025-10-07 15:09:49,327 | INFO     | exeerrordiag: 
[2025-10-07 11:10:21] 2025-10-07 15:09:49,327 | INFO     | exitcode: 0
[2025-10-07 11:10:21] 2025-10-07 15:09:49,327 | INFO     | exitmsg: OK
[2025-10-07 11:10:21] 2025-10-07 15:09:49,328 | INFO     | cpuconsumptiontime: 41332 s
[2025-10-07 11:10:21] 2025-10-07 15:09:49,328 | INFO     | nevents: 400
[2025-10-07 11:10:21] 2025-10-07 15:09:49,328 | INFO     | neventsw: 0
[2025-10-07 11:10:21] 2025-10-07 15:09:49,328 | INFO     | pid: 30395
[2025-10-07 11:10:21] 2025-10-07 15:09:49,328 | INFO     | pgrp: 30395
[2025-10-07 11:10:21] 2025-10-07 15:09:49,328 | INFO     | corecount: 12
[2025-10-07 11:10:21] 2025-10-07 15:09:49,329 | INFO     | event service: False
[2025-10-07 11:10:21] 2025-10-07 15:09:49,329 | INFO     | sizes: {0: 2348820, 5: 2349082, 11: 2349138, 3855: 2374921, 3856: 2374920, 3858: 2383974, 3859: 2384158, 3865: 2384352}
[2025-10-07 11:10:21] 2025-10-07 15:09:49,329 | INFO     | --------------------------------------------------
[2025-10-07 11:10:21] 2025-10-07 15:09:49,329 | INFO     | 
[2025-10-07 11:10:21] 2025-10-07 15:09:49,329 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 11:10:21] 2025-10-07 15:09:49,352 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,352 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,352 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,352 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,355 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 11:10:21] 2025-10-07 15:09:49,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,355 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 11:10:21] 2025-10-07 15:09:49,355 | INFO     | job 6833170350 has completed (purged errors)
[2025-10-07 11:10:21] 2025-10-07 15:09:49,356 | INFO     | overall cleanup function is called
[2025-10-07 11:10:21] 2025-10-07 15:09:50,364 | INFO     | --- collectZombieJob: --- 10, [30395]
[2025-10-07 11:10:21] 2025-10-07 15:09:50,364 | INFO     | zombie collector waiting for pid 30395
[2025-10-07 11:10:21] 2025-10-07 15:09:50,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 11:10:21] 2025-10-07 15:09:50,364 | INFO     | collected zombie processes
[2025-10-07 11:10:21] 2025-10-07 15:09:50,365 | INFO     | will attempt to kill all subprocesses of pid=30395
[2025-10-07 11:10:21] 2025-10-07 15:09:50,455 | INFO     | process IDs to be killed: [30395] (in reverse order)
[2025-10-07 11:10:21] 2025-10-07 15:09:50,507 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 11:10:21] 2025-10-07 15:09:50,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 11:10:21] 2025-10-07 15:09:50,510 | INFO     | did not find any defunct processes belonging to 30395
[2025-10-07 11:10:21] 2025-10-07 15:09:50,512 | INFO     | did not find any defunct processes belonging to 30395
[2025-10-07 11:10:21] 2025-10-07 15:09:50,513 | INFO     | ready for new job
[2025-10-07 11:10:21] 2025-10-07 15:09:50,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 11:10:21] 2025-10-07 15:09:50,514 | INFO     | ***************************************
[2025-10-07 11:10:21] 2025-10-07 15:09:50,514 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 11:10:21] 2025-10-07 15:09:50,514 | INFO     | ***************************************
[2025-10-07 11:10:21] 2025-10-07 15:09:50,514 | INFO     | 
[2025-10-07 11:10:21] 2025-10-07 15:09:50,514 | INFO     | architecture information:
[2025-10-07 11:10:21] 2025-10-07 15:09:50,515 | INFO     | executing command: cat /etc/os-release
[2025-10-07 11:10:21] 2025-10-07 15:09:50,530 | INFO     | cat /etc/os-release:
[2025-10-07 11:10:21] NAME="CentOS Linux"
[2025-10-07 11:10:21] VERSION="7 (Core)"
[2025-10-07 11:10:21] ID="centos"
[2025-10-07 11:10:21] ID_LIKE="rhel fedora"
[2025-10-07 11:10:21] VERSION_ID="7"
[2025-10-07 11:10:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 11:10:21] ANSI_COLOR="0;31"
[2025-10-07 11:10:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 11:10:21] HOME_URL="https://www.centos.org/"
[2025-10-07 11:10:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 11:10:21] 
[2025-10-07 11:10:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 11:10:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 11:10:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 11:10:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 11:10:21] 
[2025-10-07 11:10:21] 2025-10-07 15:09:50,530 | INFO     | ***************************************
[2025-10-07 11:10:21] 2025-10-07 15:09:51,033 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 11:10:21] 2025-10-07 15:09:51,050 | INFO     | sufficient remaining disk space (29393682432 B)
[2025-10-07 11:10:21] 2025-10-07 15:09:51,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 11:10:21] 2025-10-07 15:09:51,051 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 11:10:21] 2025-10-07 15:09:51,051 | INFO     | update_server=False
[2025-10-07 11:10:21] 2025-10-07 15:09:51,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 11:10:21] 2025-10-07 15:09:51,079 | INFO     | all data control threads have been joined
[2025-10-07 11:10:21] 2025-10-07 15:09:51,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:10:21] 2025-10-07 15:09:51,191 | INFO     | aborting loop
[2025-10-07 11:10:21] 2025-10-07 15:09:52,053 | INFO     | [job] retrieve thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:52,082 | INFO     | [data] control thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:52,196 | INFO     | [job] job monitor thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:52,207 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:52,240 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:52,252 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:52,285 | INFO     | all payload control threads have been joined
[2025-10-07 11:10:21] 2025-10-07 15:09:52,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 11:10:21] 2025-10-07 15:09:52,747 | INFO     | all job control threads have been joined
[2025-10-07 11:10:21] 2025-10-07 15:09:52,812 | INFO     | [data] copytool_in thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:52,914 | INFO     | [payload] failed_post thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:53,290 | INFO     | [payload] control thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:53,433 | INFO     | [job] validate thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:53,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:53,495 | INFO     | [payload] validate_post thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:53,753 | INFO     | [job] control thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:53,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 11:10:21] 2025-10-07 15:09:53,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:10:21] 2025-10-07 15:09:54,464 | INFO     | [data] copytool_out thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:54,954 | INFO     | [job] queue monitor thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:09:57,883 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 11:10:21] 2025-10-07 15:10:12,943 | INFO     | [monitor] cgroup control has ended
[2025-10-07 11:10:21] 2025-10-07 15:10:13,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140070404831040)>', '<ExcThread(monitor, started 140069721585408)>']
[2025-10-07 11:10:21] 2025-10-07 15:10:18,851 | INFO     | all workflow threads have been joined
[2025-10-07 11:10:21] 2025-10-07 15:10:18,851 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 11:10:21] 2025-10-07 15:10:18,851 | INFO     | traces error code: 0
[2025-10-07 11:10:21] 2025-10-07 15:10:18,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 11:10:21] 2025-10-07 15:10:21,360 | INFO     | PID=23235 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 11:10:21] 2025-10-07 15:10:21,361 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 11:10:21] 2025-10-07 15:10:21,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 11:10:21] 2025-10-07 15:10:21,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 11:10:21] 2025-10-07 15:10:21,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 11:10:21] 2025-10-07 15:10:21,362 | INFO     | [monitor] control thread has ended
[2025-10-07 11:10:21] 2025-10-07 15:10:21,450 [wrapper] ==== pilot stdout END ====
[2025-10-07 11:10:21] 2025-10-07 15:10:21,454 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 11:10:21] 2025-10-07 15:10:21,458 [wrapper] pilotpid: 23235
[2025-10-07 11:10:21] 2025-10-07 15:10:21,462 [wrapper] Pilot exit status: 0
[2025-10-07 11:10:21] 2025-10-07 15:10:21,479 [wrapper] pandaids: 6833170350
[2025-10-07 11:10:21] 2025-10-07 15:10:21,518 [wrapper] cleanup supervisor_pilot  6366 23236
[2025-10-07 11:10:21] 2025-10-07 15:10:21,522 [wrapper] Test setup, not cleaning
[2025-10-07 11:10:21] 2025-10-07 15:10:21,526 [wrapper] apfmon messages muted
[2025-10-07 11:10:21] 2025-10-07 15:10:21,530 [wrapper] ==== wrapper stdout END ====
[2025-10-07 11:10:21] 2025-10-07 15:10:21,534 [wrapper] ==== wrapper stderr END ====
[2025-10-07 11:10:21]  *** Error codes and diagnostics ***
[2025-10-07 11:10:21]     "exeErrorCode": 0,
[2025-10-07 11:10:21]     "exeErrorDiag": "",
[2025-10-07 11:10:21]     "pilotErrorCode": 0,
[2025-10-07 11:10:21]     "pilotErrorDiag": "",
[2025-10-07 11:10:21]  *** Listing of results directory ***
[2025-10-07 11:10:21] total 385328
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas    552446 Oct  7 01:44 pilot3.tar.gz
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas      5112 Oct  7 02:12 queuedata.json
[2025-10-07 11:10:21] -rwx------ 1 boincer umatlas     36292 Oct  7 02:13 runpilot2-wrapper.sh
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas       100 Oct  7 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 11:10:21] -rwxr-xr-x 1 boincer umatlas      7986 Oct  7 10:04 run_atlas
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas       105 Oct  7 10:04 job.xml
[2025-10-07 11:10:21] -rw-r--r-- 2 boincer umatlas 214691861 Oct  7 10:04 EVNT.46376901._004813.pool.root.1
[2025-10-07 11:10:21] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 10:04 start_atlas.sh
[2025-10-07 11:10:21] drwxrwx--x 2 boincer umatlas      4096 Oct  7 10:04 shared
[2025-10-07 11:10:21] -rw-r--r-- 2 boincer umatlas    565607 Oct  7 10:04 input.tar.gz
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas         0 Oct  7 10:04 boinc_lockfile
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas      2521 Oct  7 10:04 pandaJob.out
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas    975010 Oct  7 10:05 agis_schedconf.cvmfs.json
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas   1560401 Oct  7 10:05 agis_ddmendpoints.agis.ALL.json
[2025-10-07 11:10:21] drwx------ 4 boincer umatlas      4096 Oct  7 10:05 pilot3
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas      5953 Oct  7 11:00 init_data.xml
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas 174126751 Oct  7 11:09 HITS.46376905._129270.pool.root.1
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas       530 Oct  7 11:09 boinc_task_state.xml
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas      1050 Oct  7 11:09 memory_monitor_summary.json
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas    368619 Oct  7 11:09 log.46376905._129270.job.log.tgz.1
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas      7856 Oct  7 11:09 heartbeat.json
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas      8192 Oct  7 11:09 boinc_mmap_file
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas        27 Oct  7 11:09 wrapper_checkpoint.txt
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas        95 Oct  7 11:10 pilot_heartbeat.json
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas       745 Oct  7 11:10 pilotlog.txt
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas    569833 Oct  7 11:10 log.46376905._129270.job.log.1
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas       357 Oct  7 11:10 output.list
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas       620 Oct  7 11:10 runtime_log
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas    952320 Oct  7 11:10 result.tar.gz
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas      8705 Oct  7 11:10 runtime_log.err
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas       659 Oct  7 11:10 2EJKDmp7FQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8FWNDm7jiQCo.diag
[2025-10-07 11:10:21] -rw-r--r-- 1 boincer umatlas     21958 Oct  7 11:10 stderr.txt
[2025-10-07 11:10:21] HITS file was successfully produced:
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas 174126751 Oct  7 11:09 shared/HITS.pool.root.1
[2025-10-07 11:10:21]  *** Contents of shared directory: ***
[2025-10-07 11:10:21] total 381220
[2025-10-07 11:10:21] -rw-r--r-- 2 boincer umatlas 214691861 Oct  7 10:04 ATLAS.root_0
[2025-10-07 11:10:21] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 10:04 start_atlas.sh
[2025-10-07 11:10:21] -rw-r--r-- 2 boincer umatlas    565607 Oct  7 10:04 input.tar.gz
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas 174126751 Oct  7 11:09 HITS.pool.root.1
[2025-10-07 11:10:21] -rw------- 1 boincer umatlas    952320 Oct  7 11:10 result.tar.gz
11:10:23 (19081): run_atlas exited; CPU time 41312.476388
11:10:23 (19081): called boinc_finish(0)

</stderr_txt>
]]>

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