Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
15:10:56 (857676): wrapper (7.7.26015): starting
15:10:56 (857676): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 15:10:56] Arguments: --nthreads 8
[2025-10-07 15:10:56] Threads: 8
[2025-10-07 15:10:56] Checking for CVMFS
[2025-10-07 15:10:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 15:10:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 15:10:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 15:10:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 15:10:57] 2.13.2.0 857748 0 25504 151434 4 1 2116255 4096000 0 130560 0 0 100.000 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 15:10:57] CVMFS is ok
[2025-10-07 15:10:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 15:10:57] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 15:10:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 15:10:57] Further information can be found at the LHC@home message board.
[2025-10-07 15:10:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 15:10:57] Checking for apptainer binary...
[2025-10-07 15:10:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 15:10:57] Running /usr/bin/apptainer --version
[2025-10-07 15:10:57] apptainer version 1.4.3
[2025-10-07 15:10:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 15:10:57] 9570
[2025-10-07 15:10:57] apptainer works
[2025-10-07 15:10:57] Set ATHENA_PROC_NUMBER=8
[2025-10-07 15:10:57] Set ATHENA_CORE_NUMBER=8
[2025-10-07 15:10:57] Starting ATLAS job with PandaID=6833551375
[2025-10-07 15:10:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 19:39:42]  *** The last 200 lines of the pilot log: ***
[2025-10-07 19:39:42] 2025-10-07 17:38:45,967 | INFO     | monitor loop #1186: job 0:6833551375 is in state 'finished'
[2025-10-07 19:39:42] 2025-10-07 17:38:45,967 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 19:39:42] 2025-10-07 17:38:46,843 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 19:39:42] 2025-10-07 17:38:46,844 | INFO     | found 3 cores (3 cores per socket, 1 socket) , CPU MHz: 2396.398
[2025-10-07 19:39:42] 2025-10-07 17:38:46,844 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6833551375/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 19:39:42] 2025-10-07 17:38:46,845 | INFO     | extracted standard info from prmon json
[2025-10-07 19:39:42] 2025-10-07 17:38:46,845 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 19:39:42] 2025-10-07 17:38:46,845 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 19:39:42] 2025-10-07 17:38:46,845 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 19:39:42] 2025-10-07 17:38:46,845 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 19:39:42] 2025-10-07 17:38:46,847 | INFO     | fitting pss+swap vs Time
[2025-10-07 19:39:42] 2025-10-07 17:38:46,847 | INFO     | sum of square deviations: 5640782972.0
[2025-10-07 19:39:42] 2025-10-07 17:38:46,848 | INFO     | sum of deviations: -12505206301.999996
[2025-10-07 19:39:42] 2025-10-07 17:38:46,848 | INFO     | mean x: 1759850686.0
[2025-10-07 19:39:42] 2025-10-07 17:38:46,848 | INFO     | mean y: 2528386.8098859317
[2025-10-07 19:39:42] 2025-10-07 17:38:46,848 | INFO     | -- intersect: 3903989584.3753886
[2025-10-07 19:39:42] 2025-10-07 17:38:46,848 | INFO     | intersect: 3903989584.3753886
[2025-10-07 19:39:42] 2025-10-07 17:38:46,848 | INFO     | chi2: 1.2323595430952583
[2025-10-07 19:39:42] 2025-10-07 17:38:46,849 | INFO     | sum of square deviations: 5325139844.5
[2025-10-07 19:39:42] 2025-10-07 17:38:46,849 | INFO     | sum of deviations: -12979493624.000006
[2025-10-07 19:39:42] 2025-10-07 17:38:46,849 | INFO     | mean x: 1759850533.5
[2025-10-07 19:39:42] 2025-10-07 17:38:46,850 | INFO     | mean y: 2528157.6356589147
[2025-10-07 19:39:42] 2025-10-07 17:38:46,850 | INFO     | -- intersect: 4291987110.0326147
[2025-10-07 19:39:42] 2025-10-07 17:38:46,850 | INFO     | intersect: 4291987110.0326147
[2025-10-07 19:39:42] 2025-10-07 17:38:46,850 | INFO     | chi2: 1.2305761063350615
[2025-10-07 19:39:42] 2025-10-07 17:38:46,850 | INFO     | current chi2=1.2305761063350615 (change=0.144717243452945 %)
[2025-10-07 19:39:42] 2025-10-07 17:38:46,850 | INFO     | right removable region: 257
[2025-10-07 19:39:42] 2025-10-07 17:38:46,850 | INFO     | sum of square deviations: 5325139844.5
[2025-10-07 19:39:42] 2025-10-07 17:38:46,851 | INFO     | sum of deviations: -38153293569.0
[2025-10-07 19:39:42] 2025-10-07 17:38:46,851 | INFO     | mean x: 1759850838.5
[2025-10-07 19:39:42] 2025-10-07 17:38:46,851 | INFO     | mean y: 2540604.201550388
[2025-10-07 19:39:42] 2025-10-07 17:38:46,851 | INFO     | -- intersect: 12611431194.800817
[2025-10-07 19:39:42] 2025-10-07 17:38:46,851 | INFO     | intersect: 12611431194.800817
[2025-10-07 19:39:42] 2025-10-07 17:38:46,851 | INFO     | chi2: 0.13261983187185317
[2025-10-07 19:39:42] 2025-10-07 17:38:46,851 | INFO     | current chi2=0.13261983187185317 (change=89.2385438474588 %)
[2025-10-07 19:39:42] 2025-10-07 17:38:46,851 | INFO     | sum of square deviations: 5021496942.0
[2025-10-07 19:39:42] 2025-10-07 17:38:46,852 | INFO     | sum of deviations: -33807150990.0
[2025-10-07 19:39:42] 2025-10-07 17:38:46,852 | INFO     | mean x: 1759850991.0
[2025-10-07 19:39:42] 2025-10-07 17:38:46,852 | INFO     | mean y: 2538419.2924901186
[2025-10-07 19:39:42] 2025-10-07 17:38:46,852 | INFO     | -- intersect: 11850708170.231697
[2025-10-07 19:39:42] 2025-10-07 17:38:46,852 | INFO     | intersect: 11850708170.231697
[2025-10-07 19:39:42] 2025-10-07 17:38:46,852 | INFO     | chi2: 0.1302539347703714
[2025-10-07 19:39:42] 2025-10-07 17:38:46,852 | INFO     | current chi2=0.1302539347703714 (change=1.7839693114434598 %)
[2025-10-07 19:39:42] 2025-10-07 17:38:46,852 | INFO     | left removable region: 20
[2025-10-07 19:39:42] 2025-10-07 17:38:46,853 | INFO     | sum of square deviations: 4127772278.0
[2025-10-07 19:39:42] 2025-10-07 17:38:46,853 | INFO     | sum of deviations: -23218864930.0
[2025-10-07 19:39:42] 2025-10-07 17:38:46,853 | INFO     | mean x: 1759851113.0
[2025-10-07 19:39:42] 2025-10-07 17:38:46,853 | INFO     | mean y: 2532394.189873418
[2025-10-07 19:39:42] 2025-10-07 17:38:46,853 | INFO     | -- intersect: 9901757094.021332
[2025-10-07 19:39:42] 2025-10-07 17:38:46,853 | INFO     | intersect: 9901757094.021332
[2025-10-07 19:39:42] 2025-10-07 17:38:46,853 | INFO     | chi2: 0.11385065602280235
[2025-10-07 19:39:42] 2025-10-07 17:38:46,853 | INFO     | -- intersect: 9901757094.021332
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | current memory leak: -5.63 B/s (using 237 data points, chi2=0.11)
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | could have reported an average CPU frequency of 2396 MHz (12 samples)
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | ..............................
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | . Timing measurements:
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | . get job = 0 s
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | . initial setup = 1 s
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | . payload setup = 4 s
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | . stage-in = 0 s
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | . payload execution = 16026 s
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | . stage-out = 0 s
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | . log creation = 0 s
[2025-10-07 19:39:42] 2025-10-07 17:38:46,854 | INFO     | ..............................
[2025-10-07 19:39:42] 2025-10-07 17:38:47,031 | INFO     | time since job start (16057s) is within the limit (172800.0s)
[2025-10-07 19:39:42] 2025-10-07 17:38:47,392 | INFO     | 
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | job summary report
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | --------------------------------------------------
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | PanDA job id: 6833551375
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | task id: 46373048
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | errors: (none)
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | pilot state: finished 
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | transexitcode: 0
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | exeerrorcode: 0
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | exeerrordiag: 
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | exitcode: 0
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | exitmsg: OK
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | cpuconsumptiontime: 27256 s
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | nevents: 400
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | neventsw: 0
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | pid: 878084
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | pgrp: 878084
[2025-10-07 19:39:42] 2025-10-07 17:38:47,393 | INFO     | corecount: 8
[2025-10-07 19:39:42] 2025-10-07 17:38:47,394 | INFO     | event service: False
[2025-10-07 19:39:42] 2025-10-07 17:38:47,394 | INFO     | sizes: {0: 2348847, 1: 2348847, 3: 2349137, 11: 2349165, 16033: 2380659, 16034: 2380658, 16036: 2389910, 16043: 2390048}
[2025-10-07 19:39:42] 2025-10-07 17:38:47,394 | INFO     | --------------------------------------------------
[2025-10-07 19:39:42] 2025-10-07 17:38:47,394 | INFO     | 
[2025-10-07 19:39:42] 2025-10-07 17:38:47,394 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-07 19:39:42] 2025-10-07 17:38:47,410 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,410 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,410 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,410 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,410 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | job 6833551375 has completed (purged errors)
[2025-10-07 19:39:42] 2025-10-07 17:38:47,411 | INFO     | overall cleanup function is called
[2025-10-07 19:39:42] 2025-10-07 17:38:48,417 | INFO     | --- collectZombieJob: --- 10, [878084]
[2025-10-07 19:39:42] 2025-10-07 17:38:48,418 | INFO     | zombie collector waiting for pid 878084
[2025-10-07 19:39:42] 2025-10-07 17:38:48,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 19:39:42] 2025-10-07 17:38:48,418 | INFO     | collected zombie processes
[2025-10-07 19:39:42] 2025-10-07 17:38:48,418 | INFO     | will attempt to kill all subprocesses of pid=878084
[2025-10-07 19:39:42] 2025-10-07 17:38:48,442 | INFO     | process IDs to be killed: [878084] (in reverse order)
[2025-10-07 19:39:42] 2025-10-07 17:38:48,467 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 19:39:42] 2025-10-07 17:38:48,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 19:39:42] 2025-10-07 17:38:48,468 | INFO     | did not find any defunct processes belonging to 878084
[2025-10-07 19:39:42] 2025-10-07 17:38:48,469 | INFO     | did not find any defunct processes belonging to 878084
[2025-10-07 19:39:42] 2025-10-07 17:38:48,469 | INFO     | ready for new job
[2025-10-07 19:39:42] 2025-10-07 17:38:48,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 19:39:42] 2025-10-07 17:38:48,471 | INFO     | ***************************************
[2025-10-07 19:39:42] 2025-10-07 17:38:48,471 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 19:39:42] 2025-10-07 17:38:48,472 | INFO     | ***************************************
[2025-10-07 19:39:42] 2025-10-07 17:38:48,472 | INFO     | 
[2025-10-07 19:39:42] 2025-10-07 17:38:48,472 | INFO     | pilot is running in a VM
[2025-10-07 19:39:42] 2025-10-07 17:38:48,472 | INFO     | architecture information:
[2025-10-07 19:39:42] 2025-10-07 17:38:48,472 | INFO     | executing command: cat /etc/os-release
[2025-10-07 19:39:42] 2025-10-07 17:38:48,483 | INFO     | cat /etc/os-release:
[2025-10-07 19:39:42] NAME="CentOS Linux"
[2025-10-07 19:39:42] VERSION="7 (Core)"
[2025-10-07 19:39:42] ID="centos"
[2025-10-07 19:39:42] ID_LIKE="rhel fedora"
[2025-10-07 19:39:42] VERSION_ID="7"
[2025-10-07 19:39:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 19:39:42] ANSI_COLOR="0;31"
[2025-10-07 19:39:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 19:39:42] HOME_URL="https://www.centos.org/"
[2025-10-07 19:39:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 19:39:42] 
[2025-10-07 19:39:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 19:39:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 19:39:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 19:39:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 19:39:42] 
[2025-10-07 19:39:42] 2025-10-07 17:38:48,483 | INFO     | ***************************************
[2025-10-07 19:39:42] 2025-10-07 17:38:48,986 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-07 19:39:42] 2025-10-07 17:38:48,998 | INFO     | sufficient remaining disk space (59123957760 B)
[2025-10-07 19:39:42] 2025-10-07 17:38:48,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 19:39:42] 2025-10-07 17:38:48,998 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 19:39:42] 2025-10-07 17:38:48,998 | INFO     | update_server=False
[2025-10-07 19:39:42] 2025-10-07 17:38:48,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 19:39:42] 2025-10-07 17:38:48,998 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-07 19:39:42] 2025-10-07 17:38:48,999 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 19:39:42] 2025-10-07 17:38:48,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 19:39:42] 2025-10-07 17:38:48,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 19:39:42] 2025-10-07 17:38:49,113 | INFO     | all payload control threads have been joined
[2025-10-07 19:39:42] 2025-10-07 17:38:49,455 | INFO     | all data control threads have been joined
[2025-10-07 19:39:42] 2025-10-07 17:38:49,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 19:39:42] 2025-10-07 17:38:49,474 | INFO     | aborting loop
[2025-10-07 19:39:42] 2025-10-07 17:38:49,645 | INFO     | all job control threads have been joined
[2025-10-07 19:39:42] 2025-10-07 17:38:50,004 | INFO     | [job] retrieve thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:50,119 | INFO     | [payload] control thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:50,148 | INFO     | [job] validate thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:50,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 19:39:42] 2025-10-07 17:38:50,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 19:39:42] 2025-10-07 17:38:50,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:50,396 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:50,460 | INFO     | [data] control thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:50,467 | INFO     | [data] copytool_in thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:50,479 | INFO     | [job] job monitor thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:50,651 | INFO     | [job] control thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:50,919 | INFO     | [payload] failed_post thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:51,070 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:51,173 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:51,549 | INFO     | [payload] validate_post thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:51,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 19:39:42] 2025-10-07 17:38:52,175 | INFO     | [data] copytool_out thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:52,908 | INFO     | [job] queue monitor thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:38:54,208 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 19:39:42] 2025-10-07 17:39:36,589 | INFO     | [monitor] cgroup control has ended
[2025-10-07 19:39:42] 2025-10-07 17:39:37,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124440779921216)>', '<ExcThread(monitor, started 124439689684736)>']
[2025-10-07 19:39:42] 2025-10-07 17:39:37,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 19:39:42] 2025-10-07 17:39:37,219 | INFO     | [monitor] control thread has ended
[2025-10-07 19:39:42] 2025-10-07 17:39:42,174 | INFO     | all workflow threads have been joined
[2025-10-07 19:39:42] 2025-10-07 17:39:42,175 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 19:39:42] 2025-10-07 17:39:42,175 | INFO     | traces error code: 0
[2025-10-07 19:39:42] 2025-10-07 17:39:42,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 19:39:42] 2025-10-07 17:39:42,267 [wrapper] ==== pilot stdout END ====
[2025-10-07 19:39:42] 2025-10-07 17:39:42,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 19:39:42] 2025-10-07 17:39:42,273 [wrapper] pilotpid: 865386
[2025-10-07 19:39:42] 2025-10-07 17:39:42,275 [wrapper] Pilot exit status: 0
[2025-10-07 19:39:42] 2025-10-07 17:39:42,284 [wrapper] pandaids: 6833551375
[2025-10-07 19:39:42] 2025-10-07 17:39:42,302 [wrapper] cleanup supervisor_pilot  934942 865387
[2025-10-07 19:39:42] 2025-10-07 17:39:42,305 [wrapper] Test setup, not cleaning
[2025-10-07 19:39:42] 2025-10-07 17:39:42,307 [wrapper] apfmon messages muted
[2025-10-07 19:39:42] 2025-10-07 17:39:42,309 [wrapper] ==== wrapper stdout END ====
[2025-10-07 19:39:42] 2025-10-07 17:39:42,311 [wrapper] ==== wrapper stderr END ====
[2025-10-07 19:39:42]  *** Error codes and diagnostics ***
[2025-10-07 19:39:42]     "exeErrorCode": 0,
[2025-10-07 19:39:42]     "exeErrorDiag": "",
[2025-10-07 19:39:42]     "pilotErrorCode": 0,
[2025-10-07 19:39:42]     "pilotErrorDiag": "",
[2025-10-07 19:39:42]  *** Listing of results directory ***
[2025-10-07 19:39:42] total 414708
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc    552446 Oct  7 12:56 pilot3.tar.gz
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc      5112 Oct  7 13:00 queuedata.json
[2025-10-07 19:39:42] -rwx------ 1 boinc boinc     36292 Oct  7 13:02 runpilot2-wrapper.sh
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc       100 Oct  7 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 19:39:42] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 15:10 run_atlas
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc       105 Oct  7 15:10 job.xml
[2025-10-07 19:39:42] -rw-r--r-- 2 boinc boinc 218867093 Oct  7 15:10 EVNT.46373045._002323.pool.root.1
[2025-10-07 19:39:42] -rw-r--r-- 2 boinc boinc     15120 Oct  7 15:10 start_atlas.sh
[2025-10-07 19:39:42] drwxrwx--x 2 boinc boinc      4096 Oct  7 15:10 shared
[2025-10-07 19:39:42] -rw-r--r-- 2 boinc boinc    565611 Oct  7 15:10 input.tar.gz
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc         0 Oct  7 15:10 boinc_lockfile
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc      2537 Oct  7 15:10 pandaJob.out
[2025-10-07 19:39:42] -rw------- 1 boinc boinc    975010 Oct  7 15:11 agis_schedconf.cvmfs.json
[2025-10-07 19:39:42] drwx------ 4 boinc boinc      4096 Oct  7 15:11 pilot3
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc      6824 Oct  7 19:23 init_data.xml
[2025-10-07 19:39:42] -rw------- 1 boinc boinc        95 Oct  7 19:37 pilot_heartbeat.json
[2025-10-07 19:39:42] -rw------- 1 boinc boinc 196393942 Oct  7 19:38 HITS.46373048._097549.pool.root.1
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc       530 Oct  7 19:38 boinc_task_state.xml
[2025-10-07 19:39:42] -rw------- 1 boinc boinc      1027 Oct  7 19:38 memory_monitor_summary.json
[2025-10-07 19:39:42] -rw------- 1 boinc boinc   1560401 Oct  7 19:38 agis_ddmendpoints.agis.ALL.json
[2025-10-07 19:39:42] -rw------- 1 boinc boinc    488534 Oct  7 19:38 log.46373048._097549.job.log.tgz.1
[2025-10-07 19:39:42] -rw------- 1 boinc boinc      7709 Oct  7 19:38 heartbeat.json
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc      8192 Oct  7 19:39 boinc_mmap_file
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc        28 Oct  7 19:39 wrapper_checkpoint.txt
[2025-10-07 19:39:42] -rw------- 1 boinc boinc      4621 Oct  7 19:39 pilotlog.txt
[2025-10-07 19:39:42] -rw------- 1 boinc boinc   2264009 Oct  7 19:39 log.46373048._097549.job.log.1
[2025-10-07 19:39:42] -rw------- 1 boinc boinc       357 Oct  7 19:39 output.list
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc       620 Oct  7 19:39 runtime_log
[2025-10-07 19:39:42] -rw------- 1 boinc boinc   2775040 Oct  7 19:39 result.tar.gz
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc      8735 Oct  7 19:39 runtime_log.err
[2025-10-07 19:39:42] -rw------- 1 boinc boinc       642 Oct  7 19:39 28rNDmIeKQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMsWNDmcQ9pln.diag
[2025-10-07 19:39:42] -rw-r--r-- 1 boinc boinc     21072 Oct  7 19:39 stderr.txt
[2025-10-07 19:39:42] HITS file was successfully produced:
[2025-10-07 19:39:42] -rw------- 1 boinc boinc 196393942 Oct  7 19:38 shared/HITS.pool.root.1
[2025-10-07 19:39:42]  *** Contents of shared directory: ***
[2025-10-07 19:39:42] total 408824
[2025-10-07 19:39:42] -rw-r--r-- 2 boinc boinc 218867093 Oct  7 15:10 ATLAS.root_0
[2025-10-07 19:39:42] -rw-r--r-- 2 boinc boinc     15120 Oct  7 15:10 start_atlas.sh
[2025-10-07 19:39:42] -rw-r--r-- 2 boinc boinc    565611 Oct  7 15:10 input.tar.gz
[2025-10-07 19:39:42] -rw------- 1 boinc boinc 196393942 Oct  7 19:38 HITS.pool.root.1
[2025-10-07 19:39:42] -rw------- 1 boinc boinc   2775040 Oct  7 19:39 result.tar.gz
19:39:43 (857676): run_atlas exited; CPU time 27243.861933
19:39:43 (857676): called boinc_finish(0)

</stderr_txt>
]]>

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