Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:33:15 (9375): wrapper (7.7.26015): starting
22:33:15 (9375): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 22:33:16] Arguments: --nthreads 8
[2025-10-07 22:33:16] Threads: 8
[2025-10-07 22:33:16] Checking for CVMFS
[2025-10-07 22:33:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 22:33:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 22:33:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 22:33:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 22:33:19] 2.11.2.0 23110 213689 136996 151446 3 61 13431469 25165825 4632 130560 0 107287215 99.871 67584945 3511 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 22:33:19] CVMFS is ok
[2025-10-07 22:33:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 22:33:19] Checking for apptainer binary...
[2025-10-07 22:33:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 22:33:19] Running /usr/bin/apptainer --version
[2025-10-07 22:33:19] apptainer version 1.3.2-1.el7
[2025-10-07 22:33:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 22:33:32] cg-vwn378.simple-grid.lan
[2025-10-07 22:33:32] apptainer works
[2025-10-07 22:33:32] Set ATHENA_PROC_NUMBER=8
[2025-10-07 22:33:32] Set ATHENA_CORE_NUMBER=8
[2025-10-07 22:33:32] Starting ATLAS job with PandaID=6833421714
[2025-10-07 22:33:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 02:21:33]  *** The last 200 lines of the pilot log: ***
[2025-10-08 02:21:34] 2025-10-08 00:20:41,418 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 02:21:34] 2025-10-08 00:20:41,419 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-08 02:21:34] 2025-10-08 00:20:41,421 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6833421714/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 02:21:34] 2025-10-08 00:20:41,422 | INFO     | extracted standard info from prmon json
[2025-10-08 02:21:34] 2025-10-08 00:20:41,422 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 02:21:34] 2025-10-08 00:20:41,422 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 02:21:34] 2025-10-08 00:20:41,422 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 02:21:34] 2025-10-08 00:20:41,422 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 02:21:34] 2025-10-08 00:20:41,427 | INFO     | fitting pss+swap vs Time
[2025-10-08 02:21:34] 2025-10-08 00:20:41,427 | INFO     | sum of square deviations: 2912836010.0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,436 | INFO     | sum of deviations: 41237650782.00001
[2025-10-08 02:21:34] 2025-10-08 00:20:41,436 | INFO     | mean x: 1759876290.0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,437 | INFO     | mean y: 2444437.81042654
[2025-10-08 02:21:34] 2025-10-08 00:20:41,437 | INFO     | -- intersect: -24912505671.770844
[2025-10-08 02:21:34] 2025-10-08 00:20:41,437 | INFO     | intersect: -24912505671.770844
[2025-10-08 02:21:34] 2025-10-08 00:20:41,437 | INFO     | chi2: 5.041236183950322
[2025-10-08 02:21:34] 2025-10-08 00:20:41,438 | INFO     | sum of square deviations: 2710627567.5
[2025-10-08 02:21:34] 2025-10-08 00:20:41,439 | INFO     | sum of deviations: 54055172966.49999
[2025-10-08 02:21:34] 2025-10-08 00:20:41,440 | INFO     | mean x: 1759876137.5
[2025-10-08 02:21:34] 2025-10-08 00:20:41,440 | INFO     | mean y: 2453902.7524271845
[2025-10-08 02:21:34] 2025-10-08 00:20:41,440 | INFO     | -- intersect: -35092890862.70969
[2025-10-08 02:21:34] 2025-10-08 00:20:41,440 | INFO     | intersect: -35092890862.70969
[2025-10-08 02:21:34] 2025-10-08 00:20:41,440 | INFO     | chi2: 4.3110898270424105
[2025-10-08 02:21:34] 2025-10-08 00:20:41,441 | INFO     | current chi2=4.3110898270424105 (change=14.483478461740463 %)
[2025-10-08 02:21:34] 2025-10-08 00:20:41,441 | INFO     | right removable region: 205
[2025-10-08 02:21:34] 2025-10-08 00:20:41,441 | INFO     | sum of square deviations: 2710627567.5
[2025-10-08 02:21:34] 2025-10-08 00:20:41,443 | INFO     | sum of deviations: -25134798954.5
[2025-10-08 02:21:34] 2025-10-08 00:20:41,443 | INFO     | mean x: 1759876442.5
[2025-10-08 02:21:34] 2025-10-08 00:20:41,443 | INFO     | mean y: 2494389.645631068
[2025-10-08 02:21:34] 2025-10-08 00:20:41,443 | INFO     | -- intersect: 16321276467.035604
[2025-10-08 02:21:34] 2025-10-08 00:20:41,443 | INFO     | intersect: 16321276467.035604
[2025-10-08 02:21:34] 2025-10-08 00:20:41,444 | INFO     | chi2: 1.1047238559276076
[2025-10-08 02:21:34] 2025-10-08 00:20:41,444 | INFO     | current chi2=1.1047238559276076 (change=78.08625076038504 %)
[2025-10-08 02:21:34] 2025-10-08 00:20:41,444 | INFO     | sum of square deviations: 2518000700.0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,446 | INFO     | sum of deviations: -34363495390.0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,446 | INFO     | mean x: 1759876595.0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,446 | INFO     | mean y: 2501585.9452736317
[2025-10-08 02:21:34] 2025-10-08 00:20:41,446 | INFO     | -- intersect: 24019774996.25505
[2025-10-08 02:21:34] 2025-10-08 00:20:41,446 | INFO     | intersect: 24019774996.25505
[2025-10-08 02:21:34] 2025-10-08 00:20:41,447 | INFO     | chi2: 0.9283237176954051
[2025-10-08 02:21:34] 2025-10-08 00:20:41,447 | INFO     | current chi2=0.9283237176954051 (change=15.967803834930667 %)
[2025-10-08 02:21:34] 2025-10-08 00:20:41,447 | INFO     | left removable region: 20
[2025-10-08 02:21:34] 2025-10-08 00:20:41,447 | INFO     | sum of square deviations: 1963274020.0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,448 | INFO     | sum of deviations: -7772636225.999998
[2025-10-08 02:21:34] 2025-10-08 00:20:41,449 | INFO     | mean x: 1759876717.0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,449 | INFO     | mean y: 2501670.918918919
[2025-10-08 02:21:34] 2025-10-08 00:20:41,449 | INFO     | -- intersect: 6969884412.451935
[2025-10-08 02:21:34] 2025-10-08 00:20:41,449 | INFO     | intersect: 6969884412.451935
[2025-10-08 02:21:34] 2025-10-08 00:20:41,449 | INFO     | chi2: 0.08698421705387592
[2025-10-08 02:21:34] 2025-10-08 00:20:41,449 | INFO     | -- intersect: 6969884412.451935
[2025-10-08 02:21:34] 2025-10-08 00:20:41,450 | INFO     | current memory leak: -3.96 B/s (using 185 data points, chi2=0.09)
[2025-10-08 02:21:34] 2025-10-08 00:20:41,450 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-08 02:21:34] 2025-10-08 00:20:41,450 | INFO     | ..............................
[2025-10-08 02:21:34] 2025-10-08 00:20:41,451 | INFO     | . Timing measurements:
[2025-10-08 02:21:34] 2025-10-08 00:20:41,451 | INFO     | . get job = 0 s
[2025-10-08 02:21:34] 2025-10-08 00:20:41,451 | INFO     | . initial setup = 5 s
[2025-10-08 02:21:34] 2025-10-08 00:20:41,451 | INFO     | . payload setup = 124 s
[2025-10-08 02:21:34] 2025-10-08 00:20:41,451 | INFO     | . stage-in = 0 s
[2025-10-08 02:21:34] 2025-10-08 00:20:41,451 | INFO     | . payload execution = 13004 s
[2025-10-08 02:21:34] 2025-10-08 00:20:41,451 | INFO     | . stage-out = 4 s
[2025-10-08 02:21:34] 2025-10-08 00:20:41,451 | INFO     | . log creation = 1 s
[2025-10-08 02:21:34] 2025-10-08 00:20:41,451 | INFO     | ..............................
[2025-10-08 02:21:34] 2025-10-08 00:20:41,669 | INFO     | 
[2025-10-08 02:21:34] 2025-10-08 00:20:41,669 | INFO     | job summary report
[2025-10-08 02:21:34] 2025-10-08 00:20:41,669 | INFO     | --------------------------------------------------
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | PanDA job id: 6833421714
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | task id: 46376905
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | errors: (none)
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | pilot state: finished 
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | transexitcode: 0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | exeerrorcode: 0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | exeerrordiag: 
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | exitcode: 0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | exitmsg: OK
[2025-10-08 02:21:34] 2025-10-08 00:20:41,670 | INFO     | cpuconsumptiontime: 49048 s
[2025-10-08 02:21:34] 2025-10-08 00:20:41,671 | INFO     | nevents: 400
[2025-10-08 02:21:34] 2025-10-08 00:20:41,671 | INFO     | neventsw: 0
[2025-10-08 02:21:34] 2025-10-08 00:20:41,671 | INFO     | pid: 19708
[2025-10-08 02:21:34] 2025-10-08 00:20:41,671 | INFO     | pgrp: 19708
[2025-10-08 02:21:34] 2025-10-08 00:20:41,671 | INFO     | corecount: 8
[2025-10-08 02:21:34] 2025-10-08 00:20:41,671 | INFO     | event service: False
[2025-10-08 02:21:34] 2025-10-08 00:20:41,671 | INFO     | sizes: {0: 2347991, 1: 2348677, 2: 2348876, 13: 2348876, 23: 2348932, 34: 2348960, 45: 2349116, 56: 2349144, 66: 2349172, 77: 2349200, 88: 2349256, 93: 2349826, 99
[2025-10-08 02:21:34] 2025-10-08 00:20:41,671 | INFO     | --------------------------------------------------
[2025-10-08 02:21:34] 2025-10-08 00:20:41,671 | INFO     | 
[2025-10-08 02:21:34] 2025-10-08 00:20:41,671 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-08 02:21:34] 2025-10-08 00:20:42,043 | INFO     | PID=13192 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 02:21:34] 2025-10-08 00:20:42,043 | INFO     | .. there are 9 such processes running
[2025-10-08 02:21:34] 2025-10-08 00:20:42,088 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,088 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,088 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,088 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,088 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,089 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,089 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,089 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,089 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,089 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,089 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,089 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,090 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 02:21:34] 2025-10-08 00:20:42,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,090 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 02:21:34] 2025-10-08 00:20:42,090 | INFO     | job 6833421714 has completed (purged errors)
[2025-10-08 02:21:34] 2025-10-08 00:20:42,090 | INFO     | overall cleanup function is called
[2025-10-08 02:21:34] 2025-10-08 00:20:43,099 | INFO     | --- collectZombieJob: --- 10, [19708]
[2025-10-08 02:21:34] 2025-10-08 00:20:43,100 | INFO     | zombie collector waiting for pid 19708
[2025-10-08 02:21:34] 2025-10-08 00:20:43,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 02:21:34] 2025-10-08 00:20:43,100 | INFO     | collected zombie processes
[2025-10-08 02:21:34] 2025-10-08 00:20:43,100 | INFO     | will attempt to kill all subprocesses of pid=19708
[2025-10-08 02:21:34] 2025-10-08 00:20:43,197 | INFO     | process IDs to be killed: [19708] (in reverse order)
[2025-10-08 02:21:34] 2025-10-08 00:20:43,872 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 02:21:34] 2025-10-08 00:20:43,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 02:21:34] 2025-10-08 00:20:43,876 | INFO     | did not find any defunct processes belonging to 19708
[2025-10-08 02:21:34] 2025-10-08 00:20:43,879 | INFO     | did not find any defunct processes belonging to 19708
[2025-10-08 02:21:34] 2025-10-08 00:20:43,879 | INFO     | ready for new job
[2025-10-08 02:21:34] 2025-10-08 00:20:43,879 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 02:21:34] 2025-10-08 00:20:43,882 | INFO     | ***************************************
[2025-10-08 02:21:34] 2025-10-08 00:20:43,882 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 02:21:34] 2025-10-08 00:20:43,882 | INFO     | ***************************************
[2025-10-08 02:21:34] 2025-10-08 00:20:43,882 | INFO     | 
[2025-10-08 02:21:34] 2025-10-08 00:20:43,883 | INFO     | pilot is running in a VM
[2025-10-08 02:21:34] 2025-10-08 00:20:43,883 | INFO     | architecture information:
[2025-10-08 02:21:34] 2025-10-08 00:20:43,889 | INFO     | executing command: cat /etc/os-release
[2025-10-08 02:21:34] 2025-10-08 00:20:44,090 | INFO     | cat /etc/os-release:
[2025-10-08 02:21:34] NAME="CentOS Linux"
[2025-10-08 02:21:34] VERSION="7 (Core)"
[2025-10-08 02:21:34] ID="centos"
[2025-10-08 02:21:34] ID_LIKE="rhel fedora"
[2025-10-08 02:21:34] VERSION_ID="7"
[2025-10-08 02:21:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 02:21:34] ANSI_COLOR="0;31"
[2025-10-08 02:21:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 02:21:34] HOME_URL="https://www.centos.org/"
[2025-10-08 02:21:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 02:21:34] 
[2025-10-08 02:21:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 02:21:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 02:21:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 02:21:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 02:21:34] 
[2025-10-08 02:21:34] 2025-10-08 00:20:44,090 | INFO     | ***************************************
[2025-10-08 02:21:34] 2025-10-08 00:20:44,594 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-08 02:21:34] 2025-10-08 00:20:44,833 | INFO     | sufficient remaining disk space (496198746112 B)
[2025-10-08 02:21:34] 2025-10-08 00:20:44,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 02:21:34] 2025-10-08 00:20:44,833 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 02:21:34] 2025-10-08 00:20:44,833 | INFO     | update_server=False
[2025-10-08 02:21:34] 2025-10-08 00:20:44,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 02:21:34] 2025-10-08 00:20:44,877 | INFO     | all payload control threads have been joined
[2025-10-08 02:21:34] 2025-10-08 00:20:44,969 | INFO     | all data control threads have been joined
[2025-10-08 02:21:34] 2025-10-08 00:20:45,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 02:21:34] 2025-10-08 00:20:45,443 | INFO     | aborting loop
[2025-10-08 02:21:34] 2025-10-08 00:20:45,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 02:21:34] 2025-10-08 00:20:45,839 | INFO     | [job] retrieve thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:45,850 | INFO     | [payload] validate_post thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:45,883 | INFO     | [payload] control thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:45,917 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:45,975 | INFO     | [data] control thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:46,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 02:21:34] 2025-10-08 00:20:46,177 | INFO     | all job control threads have been joined
[2025-10-08 02:21:34] 2025-10-08 00:20:46,411 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:46,448 | INFO     | [job] job monitor thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:46,575 | INFO     | [data] copytool_in thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:46,581 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:46,612 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:46,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 02:21:34] 2025-10-08 00:20:46,916 | INFO     | [job] validate thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:47,183 | INFO     | [job] control thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:47,244 | INFO     | [payload] failed_post thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:47,691 | INFO     | [job] queue monitor thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:47,828 | INFO     | [data] copytool_out thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:20:50,160 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 02:21:34] 2025-10-08 00:21:14,224 | INFO     | PID=13192 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 02:21:34] 2025-10-08 00:21:14,224 | INFO     | .. there are 9 such processes running
[2025-10-08 02:21:34] 2025-10-08 00:21:14,224 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 02:21:34] 2025-10-08 00:21:14,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 02:21:34] 2025-10-08 00:21:14,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 02:21:34] 2025-10-08 00:21:22,148 | INFO     | [monitor] cgroup control has ended
[2025-10-08 02:21:34] 2025-10-08 00:21:24,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895947319104)>', '<ExcThread(monitor, started 139895490189056)>']
[2025-10-08 02:21:34] 2025-10-08 00:21:24,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 02:21:34] 2025-10-08 00:21:24,283 | INFO     | [monitor] control thread has ended
[2025-10-08 02:21:34] 2025-10-08 00:21:29,236 | INFO     | all workflow threads have been joined
[2025-10-08 02:21:34] 2025-10-08 00:21:29,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 02:21:34] 2025-10-08 00:21:29,237 | INFO     | traces error code: 0
[2025-10-08 02:21:34] 2025-10-08 00:21:29,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 02:21:34] 2025-10-08 00:21:29,626 [wrapper] ==== pilot stdout END ====
[2025-10-08 02:21:34] 2025-10-08 00:21:29,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 02:21:34] 2025-10-08 00:21:29,831 [wrapper] pilotpid: 13192
[2025-10-08 02:21:34] 2025-10-08 00:21:29,897 [wrapper] Pilot exit status: 0
[2025-10-08 02:21:34] 2025-10-08 00:21:30,406 [wrapper] pandaids: 6833421714
[2025-10-08 02:21:34] 2025-10-08 00:21:31,447 [wrapper] cleanup supervisor_pilot 11254 13193
[2025-10-08 02:21:34] 2025-10-08 00:21:31,535 [wrapper] Test setup, not cleaning
[2025-10-08 02:21:34] 2025-10-08 00:21:31,648 [wrapper] apfmon messages muted
[2025-10-08 02:21:34] 2025-10-08 00:21:31,729 [wrapper] ==== wrapper stdout END ====
[2025-10-08 02:21:34] 2025-10-08 00:21:31,822 [wrapper] ==== wrapper stderr END ====
[2025-10-08 02:21:34]  *** Error codes and diagnostics ***
[2025-10-08 02:21:34]     "exeErrorCode": 0,
[2025-10-08 02:21:34]     "exeErrorDiag": "",
[2025-10-08 02:21:34]     "pilotErrorCode": 0,
[2025-10-08 02:21:34]     "pilotErrorDiag": "",
[2025-10-08 02:21:34]  *** Listing of results directory ***
[2025-10-08 02:21:34] total 390992
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc    552446 Oct  7 09:34 pilot3.tar.gz
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc      5112 Oct  7 09:49 queuedata.json
[2025-10-08 02:21:34] -rwx------. 1 boinc boinc     36292 Oct  7 09:50 runpilot2-wrapper.sh
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc       100 Oct  7 22:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 02:21:34] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 22:33 run_atlas
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc       105 Oct  7 22:33 job.xml
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc      6393 Oct  7 22:33 init_data.xml
[2025-10-08 02:21:34] -rw-r--r--. 2 boinc boinc 213236107 Oct  7 22:33 EVNT.46376901._004858.pool.root.1
[2025-10-08 02:21:34] -rw-r--r--. 2 boinc boinc     15120 Oct  7 22:33 start_atlas.sh
[2025-10-08 02:21:34] drwxrwx--x. 2 boinc boinc        68 Oct  7 22:33 shared
[2025-10-08 02:21:34] -rw-r--r--. 2 boinc boinc    565602 Oct  7 22:33 input.tar.gz
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc         0 Oct  7 22:33 boinc_lockfile
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc      2520 Oct  7 22:33 pandaJob.out
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc    979856 Oct  7 22:36 agis_schedconf.cvmfs.json
[2025-10-08 02:21:34] drwx------. 4 boinc boinc      4096 Oct  7 22:36 pilot3
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc 178796956 Oct  8 02:17 HITS.46376905._130609.pool.root.1
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc       531 Oct  8 02:17 boinc_task_state.xml
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc      1014 Oct  8 02:18 memory_monitor_summary.json
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc   1560401 Oct  8 02:18 agis_ddmendpoints.agis.ALL.json
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc    442291 Oct  8 02:19 log.46376905._130609.job.log.tgz.1
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc        95 Oct  8 02:20 pilot_heartbeat.json
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc      7775 Oct  8 02:20 heartbeat.json
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc      8192 Oct  8 02:21 boinc_mmap_file
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc        28 Oct  8 02:21 wrapper_checkpoint.txt
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc      4885 Oct  8 02:21 pilotlog.txt
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc   1790695 Oct  8 02:21 log.46376905._130609.job.log.1
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc       357 Oct  8 02:21 output.list
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc       620 Oct  8 02:21 runtime_log
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc   2252800 Oct  8 02:21 result.tar.gz
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc      8717 Oct  8 02:21 runtime_log.err
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc       656 Oct  8 02:21 HfcLDm8dHQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7RWNDmW9hKOm.diag
[2025-10-08 02:21:34] -rw-r--r--. 1 boinc boinc     20875 Oct  8 02:21 stderr.txt
[2025-10-08 02:21:34] HITS file was successfully produced:
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc 178796956 Oct  8 02:17 shared/HITS.pool.root.1
[2025-10-08 02:21:34]  *** Contents of shared directory: ***
[2025-10-08 02:21:34] total 385620
[2025-10-08 02:21:34] -rw-r--r--. 2 boinc boinc 213236107 Oct  7 22:33 ATLAS.root_0
[2025-10-08 02:21:34] -rw-r--r--. 2 boinc boinc     15120 Oct  7 22:33 start_atlas.sh
[2025-10-08 02:21:34] -rw-r--r--. 2 boinc boinc    565602 Oct  7 22:33 input.tar.gz
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc 178796956 Oct  8 02:17 HITS.pool.root.1
[2025-10-08 02:21:34] -rw-------. 1 boinc boinc   2252800 Oct  8 02:21 result.tar.gz
02:21:36 (9375): run_atlas exited; CPU time 49230.585833
02:21:36 (9375): called boinc_finish(0)

</stderr_txt>
]]>

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