Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 14:19:51 (487778): vboxwrapper version 26210
2025-10-09 14:19:51 (487778): BOINC client version: 8.2.4
2025-10-09 14:19:51 (487778): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-10-09 14:19:51 (487778): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 14:19:51 (487778): Create VM. (boinc_ebb2fe4e9507324f, slot#7)
2025-10-09 14:19:51 (487778): Setting Memory Size for VM. (4400MB)
2025-10-09 14:19:52 (487778): Setting CPU Count for VM. (4)
2025-10-09 14:19:52 (487778): Setting Chipset Options for VM.
2025-10-09 14:19:52 (487778): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 14:19:52 (487778): Setting Boot Options for VM.
2025-10-09 14:19:52 (487778): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 14:19:52 (487778): Enabling VM Network Access.
2025-10-09 14:19:52 (487778): Disabling USB Support for VM.
2025-10-09 14:19:52 (487778): Disabling COM Port Support for VM.
2025-10-09 14:19:52 (487778): Disabling LPT Port Support for VM.
2025-10-09 14:19:52 (487778): Disabling Audio Support for VM.
2025-10-09 14:19:52 (487778): Disabling Clipboard Support for VM.
2025-10-09 14:19:52 (487778): Disabling Drag and Drop Support for VM.
2025-10-09 14:19:53 (487778): Adding storage controller(s) to VM.
2025-10-09 14:19:53 (487778): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 14:19:53 (487778): Adding VirtualBox Guest Additions to VM.
2025-10-09 14:19:53 (487778): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 14:19:53 (487778): forwarding host port 55557 to guest port 80
2025-10-09 14:19:53 (487778): Enabling remote desktop for VM.
2025-10-09 14:19:54 (487778): Required extension pack not installed, remote desktop not enabled.
2025-10-09 14:19:54 (487778): Enabling shared directory for VM.
2025-10-09 14:19:54 (487778): Starting VM using VBoxManage interface. (boinc_ebb2fe4e9507324f, slot#7)
2025-10-09 14:19:55 (487778): Successfully started VM. (PID = '488264')
2025-10-09 14:19:55 (487778): Reporting VM Process ID to BOINC.
2025-10-09 14:19:55 (487778): Guest Log: BIOS: VirtualBox 7.0.16
2025-10-09 14:19:55 (487778): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 14:19:55 (487778): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 14:19:55 (487778): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 14:19:55 (487778): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 14:19:55 (487778): Detected: Web Application Enabled (http://localhost:55557)
2025-10-09 14:19:55 (487778): Preference change detected
2025-10-09 14:19:55 (487778): Setting CPU throttle for VM. (100%)
2025-10-09 14:19:55 (487778): Setting network throttle for VM. (1024KB)
2025-10-09 14:19:55 (487778): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 14:19:57 (487778): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 14:19:57 (487778): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 14:20:00 (487778): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 14:20:00 (487778): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 14:20:00 (487778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 14:20:00 (487778): Preference change detected
2025-10-09 14:20:00 (487778): Setting CPU throttle for VM. (100%)
2025-10-09 14:20:00 (487778): Setting network throttle for VM. (1024KB)
2025-10-09 14:20:00 (487778): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 14:20:06 (487778): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 14:20:06 (487778): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 14:20:13 (487778): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 14:20:13 (487778): Guest Log: 00:00:00.000369 main     Log opened 2025-10-09T11:20:11.450948000Z
2025-10-09 14:20:13 (487778): Guest Log: 00:00:00.000578 main     OS Product: Linux
2025-10-09 14:20:13 (487778): Guest Log: 00:00:00.000639 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 14:20:13 (487778): Guest Log: 00:00:00.000683 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 14:20:13 (487778): Guest Log: 00:00:00.000728 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 14:20:13 (487778): Guest Log: 00:00:00.000729 main     Process ID: 1306
2025-10-09 14:20:13 (487778): Guest Log: 00:00:00.000731 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 14:20:13 (487778): Guest Log: 00:00:00.002008 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 14:20:13 (487778): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 14:20:13 (487778): Guest Log: [INFO] Mounting shared directory
2025-10-09 14:20:13 (487778): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 14:20:16 (487778): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 14:20:16 (487778): Guest Log: [INFO] Detected branch: prod
2025-10-09 14:20:16 (487778): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 14:20:16 (487778): Guest Log: Copying input files
2025-10-09 14:20:17 (487778): Guest Log: Copied input files into RunAtlas.
2025-10-09 14:20:17 (487778): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 14:20:17 (487778): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 14:20:17 (487778): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 14:20:17 (487778): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 14:20:25 (487778): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 14:20:26 (487778): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 14:20:26 (487778): Guest Log: 2.6.3.0 1580 0 30164 151511 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 14:20:27 (487778): Guest Log: copied the webapp to /var/www
2025-10-09 14:20:27 (487778): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-09 14:20:27 (487778): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-09 14:20:27 (487778): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 14:20:27 (487778): Guest Log:  *** Starting ATLAS job. (PandaID=6833421499 taskID=46373048) ***
2025-10-09 15:58:55 (487778): Status Report: Elapsed Time: '6000.000000'
2025-10-09 15:58:55 (487778): Status Report: CPU Time: '22205.880000'
2025-10-09 17:18:34 (487778): Guest Log:  *** Job finished ***
2025-10-09 17:18:34 (487778): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:11,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:11,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:23,141 | INFO     | [monitor] cgroup control has ended
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:24,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140377978234688)>', '<ExcThread(monitor, started 140377298294528)>']
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:25,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:25,012 | INFO     | [monitor] control thread has ended
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,046 | INFO     | all workflow threads have been joined
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,046 | INFO     | end of generic workflow (traces error code: 0)
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,047 | INFO     | traces error code: 0
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,163 [wrapper] ==== pilot stdout END ====
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,173 [wrapper] ==== wrapper stdout RESUME ====
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,182 [wrapper] pilotpid: 5960
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,190 [wrapper] Pilot exit status: 0
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,265 [wrapper] pandaids: 6833421499
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,311 [wrapper] cleanup supervisor_pilot  8152 5961
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,322 [wrapper] Test setup, not cleaning
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,330 [wrapper] apfmon messages muted
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,339 [wrapper] ==== wrapper stdout END ====
2025-10-09 17:18:34 (487778): Guest Log: 2025-10-09 14:18:29,347 [wrapper] ==== wrapper stderr END ====
2025-10-09 17:18:34 (487778): Guest Log:  *** Error codes and diagnostics ***
2025-10-09 17:18:34 (487778): Guest Log:     "exeErrorCode": 0,
2025-10-09 17:18:34 (487778): Guest Log:     "exeErrorDiag": "",
2025-10-09 17:18:34 (487778): Guest Log:     "pilotErrorCode": 0,
2025-10-09 17:18:34 (487778): Guest Log:     "pilotErrorDiag": "",
2025-10-09 17:18:34 (487778): Guest Log:  *** Listing of results directory ***
2025-10-09 17:18:34 (487778): Guest Log: total 198208
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  7 07:34 pilot3.tar.gz
2025-10-09 17:18:34 (487778): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  7 07:36 runpilot2-wrapper.sh
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  7 07:37 queuedata.json
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 atlas atlas    565610 Oct  9 11:20 input.tar.gz
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 atlas atlas      9227 Oct  9 11:20 init_data.xml
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct  9 11:20 start_atlas.sh
2025-10-09 17:18:34 (487778): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 11:20 EVNT.46373045._002926.pool.root.1 -> /data/./ATLAS.root_0
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 atlas atlas      2538 Oct  9 11:20 pandaJob.out
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas    975446 Oct  9 11:21 agis_schedconf.cvmfs.json
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  9 11:21 agis_ddmendpoints.agis.ALL.json
2025-10-09 17:18:34 (487778): Guest Log: drwx------. 4 atlas atlas      4096 Oct  9 11:21 pilot3
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas 195704844 Oct  9 14:16 HITS.46373048._097538.pool.root.1
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas      1047 Oct  9 14:17 memory_monitor_summary.json
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas    344506 Oct  9 14:17 log.46373048._097538.job.log.tgz.1
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas        95 Oct  9 14:17 pilot_heartbeat.json
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas      7834 Oct  9 14:17 heartbeat.json
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas      5179 Oct  9 14:18 pilotlog.txt
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas   1375644 Oct  9 14:18 log.46373048._097538.job.log.1
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas       357 Oct  9 14:18 output.list
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  9 14:18 runtime_log
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas   1740800 Oct  9 14:18 result.tar.gz
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 atlas atlas      8655 Oct  9 14:18 runtime_log.err
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas       664 Oct  9 14:18 j4dKDmxQHQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmBFLMDmEGYIXm.diag
2025-10-09 17:18:34 (487778): Guest Log: Looking for outputfile HITS.46373048._097538.pool.root.1
2025-10-09 17:18:34 (487778): Guest Log: HITS file was successfully produced
2025-10-09 17:18:34 (487778): Guest Log: -rw-------. 1 atlas atlas 195704844 Oct  9 14:16 /home/atlas/RunAtlas/HITS.46373048._097538.pool.root.1
2025-10-09 17:18:34 (487778): Guest Log: Successfully finished the ATLAS job!
2025-10-09 17:18:34 (487778): Guest Log: Copying the results back to the shared directory!
2025-10-09 17:18:34 (487778): Guest Log:  *** Contents of shared directory: ***
2025-10-09 17:18:34 (487778): Guest Log: total 217044
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 root root 219907135 Oct  9 11:19 ATLAS.root_0
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 root root      9227 Oct  9 11:19 init_data.xml
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 root root    565610 Oct  9 11:19 input.tar.gz
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 root root   1740800 Oct  9 14:18 result.tar.gz
2025-10-09 17:18:34 (487778): Guest Log: -rw-r--r--. 1 root root     15120 Oct  9 11:19 start_atlas.sh
2025-10-09 17:18:34 (487778): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-09 17:18:34 (487778): VM Completion File Detected.
2025-10-09 17:18:34 (487778): Powering off VM.
2025-10-09 17:18:35 (487778): Successfully stopped VM.
2025-10-09 17:18:35 (487778): Deregistering VM. (boinc_ebb2fe4e9507324f, slot#7)
2025-10-09 17:18:35 (487778): Removing network bandwidth throttle group from VM.
2025-10-09 17:18:35 (487778): Removing VM from VirtualBox.
2025-10-09 17:18:40 (487778): called boinc_finish(0)

</stderr_txt>
]]>

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