Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:59 (13262): wrapper (7.7.26015): starting
08:37:59 (13262): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 08:37:59] Arguments: --nthreads 8
[2025-10-07 08:37:59] Threads: 8
[2025-10-07 08:37:59] Checking for CVMFS
[2025-10-07 08:37:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 08:37:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 08:37:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 08:37:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 08:37:59] 2.11.2.0 2830 1307 67068 151434 3 188 19401869 20275200 1 130560 0 1003416 99.991 43823 27440 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 08:37:59] CVMFS is ok
[2025-10-07 08:37:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 08:37:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 08:37:59] Further information can be found at the LHC@home message board.
[2025-10-07 08:37:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 08:37:59] Checking for apptainer binary...
[2025-10-07 08:37:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 08:37:59] Running /usr/bin/apptainer --version
[2025-10-07 08:37:59] apptainer version 1.3.2-1.el7
[2025-10-07 08:37:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 08:38:01] c-204-20.aglt2.org
[2025-10-07 08:38:01] apptainer works
[2025-10-07 08:38:01] Set ATHENA_PROC_NUMBER=8
[2025-10-07 08:38:01] Set ATHENA_CORE_NUMBER=8
[2025-10-07 08:38:01] Starting ATLAS job with PandaID=6833167445
[2025-10-07 08:38:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 10:25:35]  *** The last 200 lines of the pilot log: ***
[2025-10-07 10:25:35] 2025-10-07 14:24:49,241 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 10:25:35] 2025-10-07 14:24:49,241 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 10:25:35] 2025-10-07 14:24:49,241 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 10:25:35] 2025-10-07 14:24:49,243 | INFO     | fitting pss+swap vs Time
[2025-10-07 10:25:35] 2025-10-07 14:24:49,244 | INFO     | sum of square deviations: 358927660.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,244 | INFO     | sum of deviations: -933964472.9999943
[2025-10-07 10:25:35] 2025-10-07 14:24:49,244 | INFO     | mean x: 1759843902.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,245 | INFO     | mean y: 2652671.761904762
[2025-10-07 10:25:35] 2025-10-07 14:24:49,245 | INFO     | -- intersect: 4581936649.18979
[2025-10-07 10:25:35] 2025-10-07 14:24:49,245 | INFO     | intersect: 4581936649.18979
[2025-10-07 10:25:35] 2025-10-07 14:24:49,245 | INFO     | chi2: 2.556741378861584
[2025-10-07 10:25:35] 2025-10-07 14:24:49,245 | INFO     | sum of square deviations: 310052325.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,246 | INFO     | sum of deviations: 8616486863.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,246 | INFO     | mean x: 1759843749.5
[2025-10-07 10:25:35] 2025-10-07 14:24:49,246 | INFO     | mean y: 2681646.48
[2025-10-07 10:25:35] 2025-10-07 14:24:49,246 | INFO     | -- intersect: -48904129642.54811
[2025-10-07 10:25:35] 2025-10-07 14:24:49,246 | INFO     | intersect: -48904129642.54811
[2025-10-07 10:25:35] 2025-10-07 14:24:49,246 | INFO     | chi2: 1.7620222956441722
[2025-10-07 10:25:35] 2025-10-07 14:24:49,247 | INFO     | current chi2=1.7620222956441722 (change=31.08328006062423 %)
[2025-10-07 10:25:35] 2025-10-07 14:24:49,247 | INFO     | sum of square deviations: 265828240.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,247 | INFO     | sum of deviations: 11116828795.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,248 | INFO     | mean x: 1759843597.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,248 | INFO     | mean y: 2690276.168421053
[2025-10-07 10:25:35] 2025-10-07 14:24:49,248 | INFO     | -- intersect: -73593252629.76955
[2025-10-07 10:25:35] 2025-10-07 14:24:49,248 | INFO     | intersect: -73593252629.76955
[2025-10-07 10:25:35] 2025-10-07 14:24:49,248 | INFO     | chi2: 1.7349560415630134
[2025-10-07 10:25:35] 2025-10-07 14:24:49,248 | INFO     | current chi2=1.7349560415630134 (change=1.5360903291671315 %)
[2025-10-07 10:25:35] 2025-10-07 14:24:49,248 | INFO     | right removable region: 94
[2025-10-07 10:25:35] 2025-10-07 14:24:49,249 | INFO     | sum of square deviations: 310052325.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,249 | INFO     | sum of deviations: -19598544698.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,249 | INFO     | mean x: 1759844054.5
[2025-10-07 10:25:35] 2025-10-07 14:24:49,250 | INFO     | mean y: 2709862.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,250 | INFO     | -- intersect: 111243231485.65755
[2025-10-07 10:25:35] 2025-10-07 14:24:49,250 | INFO     | intersect: 111243231485.65755
[2025-10-07 10:25:35] 2025-10-07 14:24:49,250 | INFO     | chi2: 0.9417265271283367
[2025-10-07 10:25:35] 2025-10-07 14:24:49,250 | INFO     | current chi2=0.9417265271283367 (change=63.16692275119159 %)
[2025-10-07 10:25:35] 2025-10-07 14:24:49,250 | INFO     | sum of square deviations: 265828240.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,251 | INFO     | sum of deviations: -20173579254.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,251 | INFO     | mean x: 1759844207.0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,251 | INFO     | mean y: 2711704.084210526
[2025-10-07 10:25:35] 2025-10-07 14:24:49,251 | INFO     | -- intersect: 133556455221.35416
[2025-10-07 10:25:35] 2025-10-07 14:24:49,251 | INFO     | intersect: 133556455221.35416
[2025-10-07 10:25:35] 2025-10-07 14:24:49,252 | INFO     | chi2: 0.9068819241274271
[2025-10-07 10:25:35] 2025-10-07 14:24:49,252 | INFO     | current chi2=0.9068819241274271 (change=3.7000766142972923 %)
[2025-10-07 10:25:35] 2025-10-07 14:24:49,252 | INFO     | left removable region: 20
[2025-10-07 10:25:35] 2025-10-07 14:24:49,252 | INFO     | sum of square deviations: 125630262.5
[2025-10-07 10:25:35] 2025-10-07 14:24:49,252 | INFO     | sum of deviations: -6289542280.5
[2025-10-07 10:25:35] 2025-10-07 14:24:49,253 | INFO     | mean x: 1759844176.5
[2025-10-07 10:25:35] 2025-10-07 14:24:49,253 | INFO     | mean y: 2760435.581081081
[2025-10-07 10:25:35] 2025-10-07 14:24:49,253 | INFO     | -- intersect: 88107442658.85077
[2025-10-07 10:25:35] 2025-10-07 14:24:49,253 | INFO     | intersect: 88107442658.85077
[2025-10-07 10:25:35] 2025-10-07 14:24:49,253 | INFO     | chi2: 0.07351061431305334
[2025-10-07 10:25:35] 2025-10-07 14:24:49,253 | INFO     | -- intersect: 88107442658.85077
[2025-10-07 10:25:35] 2025-10-07 14:24:49,254 | INFO     | current memory leak: -50.06 B/s (using 74 data points, chi2=0.07)
[2025-10-07 10:25:35] 2025-10-07 14:24:49,254 | INFO     | could have reported an average CPU frequency of 1943 MHz (7 samples)
[2025-10-07 10:25:35] 2025-10-07 14:24:49,254 | INFO     | ..............................
[2025-10-07 10:25:35] 2025-10-07 14:24:49,254 | INFO     | . Timing measurements:
[2025-10-07 10:25:35] 2025-10-07 14:24:49,254 | INFO     | . get job = 0 s
[2025-10-07 10:25:35] 2025-10-07 14:24:49,254 | INFO     | . initial setup = 2 s
[2025-10-07 10:25:35] 2025-10-07 14:24:49,255 | INFO     | . payload setup = 8 s
[2025-10-07 10:25:35] 2025-10-07 14:24:49,255 | INFO     | . stage-in = 0 s
[2025-10-07 10:25:35] 2025-10-07 14:24:49,255 | INFO     | . payload execution = 6352 s
[2025-10-07 10:25:35] 2025-10-07 14:24:49,255 | INFO     | . stage-out = 0 s
[2025-10-07 10:25:35] 2025-10-07 14:24:49,255 | INFO     | . log creation = 0 s
[2025-10-07 10:25:35] 2025-10-07 14:24:49,255 | INFO     | ..............................
[2025-10-07 10:25:35] 2025-10-07 14:24:49,348 | INFO     | 
[2025-10-07 10:25:35] 2025-10-07 14:24:49,349 | INFO     | job summary report
[2025-10-07 10:25:35] 2025-10-07 14:24:49,349 | INFO     | --------------------------------------------------
[2025-10-07 10:25:35] 2025-10-07 14:24:49,349 | INFO     | PanDA job id: 6833167445
[2025-10-07 10:25:35] 2025-10-07 14:24:49,349 | INFO     | task id: 46376905
[2025-10-07 10:25:35] 2025-10-07 14:24:49,349 | INFO     | errors: (none)
[2025-10-07 10:25:35] 2025-10-07 14:24:49,350 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 10:25:35] 2025-10-07 14:24:49,350 | INFO     | pilot state: finished 
[2025-10-07 10:25:35] 2025-10-07 14:24:49,350 | INFO     | transexitcode: 0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,350 | INFO     | exeerrorcode: 0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,350 | INFO     | exeerrordiag: 
[2025-10-07 10:25:35] 2025-10-07 14:24:49,350 | INFO     | exitcode: 0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,351 | INFO     | exitmsg: OK
[2025-10-07 10:25:35] 2025-10-07 14:24:49,351 | INFO     | cpuconsumptiontime: 47053 s
[2025-10-07 10:25:35] 2025-10-07 14:24:49,351 | INFO     | nevents: 400
[2025-10-07 10:25:35] 2025-10-07 14:24:49,351 | INFO     | neventsw: 0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,351 | INFO     | pid: 23397
[2025-10-07 10:25:35] 2025-10-07 14:24:49,351 | INFO     | pgrp: 23397
[2025-10-07 10:25:35] 2025-10-07 14:24:49,352 | INFO     | corecount: 8
[2025-10-07 10:25:35] 2025-10-07 14:24:49,352 | INFO     | event service: False
[2025-10-07 10:25:35] 2025-10-07 14:24:49,352 | INFO     | sizes: {0: 2348649, 1: 2348848, 6: 2349110, 11: 2349138, 6364: 2376161, 6365: 2385159, 6368: 2385343, 6373: 2385537}
[2025-10-07 10:25:35] 2025-10-07 14:24:49,352 | INFO     | --------------------------------------------------
[2025-10-07 10:25:35] 2025-10-07 14:24:49,352 | INFO     | 
[2025-10-07 10:25:35] 2025-10-07 14:24:49,353 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 10:25:35] 2025-10-07 14:24:49,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,382 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,385 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 10:25:35] 2025-10-07 14:24:49,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,385 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 10:25:35] 2025-10-07 14:24:49,386 | INFO     | job 6833167445 has completed (purged errors)
[2025-10-07 10:25:35] 2025-10-07 14:24:49,386 | INFO     | overall cleanup function is called
[2025-10-07 10:25:35] 2025-10-07 14:24:50,394 | INFO     | --- collectZombieJob: --- 10, [23397]
[2025-10-07 10:25:35] 2025-10-07 14:24:50,394 | INFO     | zombie collector waiting for pid 23397
[2025-10-07 10:25:35] 2025-10-07 14:24:50,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 10:25:35] 2025-10-07 14:24:50,394 | INFO     | collected zombie processes
[2025-10-07 10:25:35] 2025-10-07 14:24:50,395 | INFO     | will attempt to kill all subprocesses of pid=23397
[2025-10-07 10:25:35] 2025-10-07 14:24:50,483 | INFO     | process IDs to be killed: [23397] (in reverse order)
[2025-10-07 10:25:35] 2025-10-07 14:24:50,541 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 10:25:35] 2025-10-07 14:24:50,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 10:25:35] 2025-10-07 14:24:50,546 | INFO     | did not find any defunct processes belonging to 23397
[2025-10-07 10:25:35] 2025-10-07 14:24:50,549 | INFO     | did not find any defunct processes belonging to 23397
[2025-10-07 10:25:35] 2025-10-07 14:24:50,549 | INFO     | ready for new job
[2025-10-07 10:25:35] 2025-10-07 14:24:50,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 10:25:35] 2025-10-07 14:24:50,551 | INFO     | ***************************************
[2025-10-07 10:25:35] 2025-10-07 14:24:50,552 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 10:25:35] 2025-10-07 14:24:50,552 | INFO     | ***************************************
[2025-10-07 10:25:35] 2025-10-07 14:24:50,552 | INFO     | 
[2025-10-07 10:25:35] 2025-10-07 14:24:50,552 | INFO     | architecture information:
[2025-10-07 10:25:35] 2025-10-07 14:24:50,553 | INFO     | executing command: cat /etc/os-release
[2025-10-07 10:25:35] 2025-10-07 14:24:50,571 | INFO     | cat /etc/os-release:
[2025-10-07 10:25:35] NAME="CentOS Linux"
[2025-10-07 10:25:35] VERSION="7 (Core)"
[2025-10-07 10:25:35] ID="centos"
[2025-10-07 10:25:35] ID_LIKE="rhel fedora"
[2025-10-07 10:25:35] VERSION_ID="7"
[2025-10-07 10:25:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 10:25:35] ANSI_COLOR="0;31"
[2025-10-07 10:25:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 10:25:35] HOME_URL="https://www.centos.org/"
[2025-10-07 10:25:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 10:25:35] 
[2025-10-07 10:25:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 10:25:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 10:25:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 10:25:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 10:25:35] 
[2025-10-07 10:25:35] 2025-10-07 14:24:50,572 | INFO     | ***************************************
[2025-10-07 10:25:35] 2025-10-07 14:24:51,075 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 10:25:35] 2025-10-07 14:24:51,095 | INFO     | sufficient remaining disk space (18740150272 B)
[2025-10-07 10:25:35] 2025-10-07 14:24:51,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 10:25:35] 2025-10-07 14:24:51,096 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 10:25:35] 2025-10-07 14:24:51,096 | INFO     | update_server=False
[2025-10-07 10:25:35] 2025-10-07 14:24:51,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 10:25:35] 2025-10-07 14:24:51,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 10:25:35] 2025-10-07 14:24:51,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 10:25:35] 2025-10-07 14:24:51,097 | INFO     | aborting loop
[2025-10-07 10:25:35] 2025-10-07 14:24:51,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 10:25:35] 2025-10-07 14:24:51,688 | INFO     | all data control threads have been joined
[2025-10-07 10:25:35] 2025-10-07 14:24:52,102 | INFO     | [job] retrieve thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:52,106 | INFO     | [job] queue monitor thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:52,107 | INFO     | [job] job monitor thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:52,418 | INFO     | [payload] validate_post thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:52,419 | INFO     | all payload control threads have been joined
[2025-10-07 10:25:35] 2025-10-07 14:24:52,632 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:52,664 | INFO     | [job] validate thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:52,693 | INFO     | [data] control thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:52,773 | INFO     | all job control threads have been joined
[2025-10-07 10:25:35] 2025-10-07 14:24:53,425 | INFO     | [payload] control thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:53,429 | INFO     | [payload] failed_post thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:53,510 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:53,526 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:53,532 | INFO     | [data] copytool_in thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:53,679 | INFO     | [data] copytool_out thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:53,778 | INFO     | [job] control thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:24:54,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 10:25:35] 2025-10-07 14:24:58,145 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:25:01,570 | INFO     | job.realtimelogging is not enabled
[2025-10-07 10:25:35] 2025-10-07 14:25:02,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 10:25:35] 2025-10-07 14:25:22,102 | INFO     | PID=16975 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 10:25:35] 2025-10-07 14:25:22,102 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 10:25:35] 2025-10-07 14:25:22,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 10:25:35] 2025-10-07 14:25:22,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 10:25:35] 2025-10-07 14:25:28,757 | INFO     | [monitor] cgroup control has ended
[2025-10-07 10:25:35] 2025-10-07 14:25:29,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073663260480)>', '<ExcThread(monitor, started 140072640837376)>']
[2025-10-07 10:25:35] 2025-10-07 14:25:30,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 10:25:35] 2025-10-07 14:25:30,140 | INFO     | [monitor] control thread has ended
[2025-10-07 10:25:35] 2025-10-07 14:25:34,901 | INFO     | all workflow threads have been joined
[2025-10-07 10:25:35] 2025-10-07 14:25:34,902 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 10:25:35] 2025-10-07 14:25:34,903 | INFO     | traces error code: 0
[2025-10-07 10:25:35] 2025-10-07 14:25:34,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 10:25:35] 2025-10-07 14:25:35,040 [wrapper] ==== pilot stdout END ====
[2025-10-07 10:25:35] 2025-10-07 14:25:35,045 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 10:25:35] 2025-10-07 14:25:35,049 [wrapper] pilotpid: 16975
[2025-10-07 10:25:35] 2025-10-07 14:25:35,054 [wrapper] Pilot exit status: 0
[2025-10-07 10:25:35] 2025-10-07 14:25:35,074 [wrapper] pandaids: 6833167445
[2025-10-07 10:25:35] 2025-10-07 14:25:35,123 [wrapper] cleanup supervisor_pilot 16680 16976
[2025-10-07 10:25:35] 2025-10-07 14:25:35,128 [wrapper] Test setup, not cleaning
[2025-10-07 10:25:35] 2025-10-07 14:25:35,133 [wrapper] apfmon messages muted
[2025-10-07 10:25:35] 2025-10-07 14:25:35,137 [wrapper] ==== wrapper stdout END ====
[2025-10-07 10:25:35] 2025-10-07 14:25:35,142 [wrapper] ==== wrapper stderr END ====
[2025-10-07 10:25:35]  *** Error codes and diagnostics ***
[2025-10-07 10:25:35]     "exeErrorCode": 0,
[2025-10-07 10:25:35]     "exeErrorDiag": "",
[2025-10-07 10:25:35]     "pilotErrorCode": 0,
[2025-10-07 10:25:35]     "pilotErrorDiag": "",
[2025-10-07 10:25:35]  *** Listing of results directory ***
[2025-10-07 10:25:35] total 385476
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas    552446 Oct  6 23:46 pilot3.tar.gz
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas      5112 Oct  7 00:14 queuedata.json
[2025-10-07 10:25:35] -rwx------ 1 boincer umatlas     36292 Oct  7 00:15 runpilot2-wrapper.sh
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas       100 Oct  7 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 10:25:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct  7 08:37 run_atlas
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas       105 Oct  7 08:37 job.xml
[2025-10-07 10:25:35] -rw-r--r-- 2 boincer umatlas 212919816 Oct  7 08:37 EVNT.46376901._004747.pool.root.1
[2025-10-07 10:25:35] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 08:37 start_atlas.sh
[2025-10-07 10:25:35] drwxrwx--x 2 boincer umatlas      4096 Oct  7 08:37 shared
[2025-10-07 10:25:35] -rw-r--r-- 2 boincer umatlas    565600 Oct  7 08:37 input.tar.gz
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas         0 Oct  7 08:37 boinc_lockfile
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas      2521 Oct  7 08:38 pandaJob.out
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas    975010 Oct  7 08:38 agis_schedconf.cvmfs.json
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas   1560401 Oct  7 08:38 agis_ddmendpoints.agis.ALL.json
[2025-10-07 10:25:35] drwx------ 4 boincer umatlas      4096 Oct  7 08:38 pilot3
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas      5909 Oct  7 10:21 init_data.xml
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas 175415928 Oct  7 10:24 HITS.46376905._127723.pool.root.1
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas       530 Oct  7 10:24 boinc_task_state.xml
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas      1047 Oct  7 10:24 memory_monitor_summary.json
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas    350126 Oct  7 10:24 log.46376905._127723.job.log.tgz.1
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas        95 Oct  7 10:24 pilot_heartbeat.json
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas      7850 Oct  7 10:24 heartbeat.json
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas      8192 Oct  7 10:25 boinc_mmap_file
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas        27 Oct  7 10:25 wrapper_checkpoint.txt
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas      4818 Oct  7 10:25 pilotlog.txt
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas    903281 Oct  7 10:25 log.46376905._127723.job.log.1
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas       357 Oct  7 10:25 output.list
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas       620 Oct  7 10:25 runtime_log
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas   1269760 Oct  7 10:25 result.tar.gz
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas      8703 Oct  7 10:25 runtime_log.err
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas       658 Oct  7 10:25 a6eLDmdHEQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLxKMDmv5g2Co.diag
[2025-10-07 10:25:35] -rw-r--r-- 1 boincer umatlas     20815 Oct  7 10:25 stderr.txt
[2025-10-07 10:25:35] HITS file was successfully produced:
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas 175415928 Oct  7 10:24 shared/HITS.pool.root.1
[2025-10-07 10:25:35]  *** Contents of shared directory: ***
[2025-10-07 10:25:35] total 381056
[2025-10-07 10:25:35] -rw-r--r-- 2 boincer umatlas 212919816 Oct  7 08:37 ATLAS.root_0
[2025-10-07 10:25:35] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 08:37 start_atlas.sh
[2025-10-07 10:25:35] -rw-r--r-- 2 boincer umatlas    565600 Oct  7 08:37 input.tar.gz
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas 175415928 Oct  7 10:24 HITS.pool.root.1
[2025-10-07 10:25:35] -rw------- 1 boincer umatlas   1269760 Oct  7 10:25 result.tar.gz
10:25:36 (13262): run_atlas exited; CPU time 47061.812051
10:25:36 (13262): called boinc_finish(0)

</stderr_txt>
]]>

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