Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-07 16:09:00 (15332): vboxwrapper version 26210
2025-10-07 16:09:00 (15332): BOINC client version: 8.2.4
2025-10-07 16:09:01 (15332): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-10-07 16:09:01 (15332): Successfully copied 'init_data.xml' to the shared directory.
2025-10-07 16:09:02 (15332): Create VM. (boinc_4b78c3cf57de53ab, slot#19)
2025-10-07 16:09:02 (15332): Setting Memory Size for VM. (4800MB)
2025-10-07 16:09:02 (15332): Setting CPU Count for VM. (8)
2025-10-07 16:09:03 (15332): Setting Chipset Options for VM.
2025-10-07 16:09:03 (15332): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-07 16:09:03 (15332): Setting Boot Options for VM.
2025-10-07 16:09:04 (15332): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-07 16:09:04 (15332): Enabling VM Network Access.
2025-10-07 16:09:04 (15332): Disabling USB Support for VM.
2025-10-07 16:09:04 (15332): Disabling COM Port Support for VM.
2025-10-07 16:09:05 (15332): Disabling LPT Port Support for VM.
2025-10-07 16:09:05 (15332): Disabling Audio Support for VM.
2025-10-07 16:09:05 (15332): Disabling Clipboard Support for VM.
2025-10-07 16:09:05 (15332): Disabling Drag and Drop Support for VM.
2025-10-07 16:09:06 (15332): Adding storage controller(s) to VM.
2025-10-07 16:09:06 (15332): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-07 16:09:07 (15332): Adding VirtualBox Guest Additions to VM.
2025-10-07 16:09:07 (15332): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-07 16:09:07 (15332): forwarding host port 61988 to guest port 80
2025-10-07 16:09:07 (15332): Enabling remote desktop for VM.
2025-10-07 16:09:08 (15332): Enabling shared directory for VM.
2025-10-07 16:09:09 (15332): Starting VM using VBoxManage interface. (boinc_4b78c3cf57de53ab, slot#19)
2025-10-07 16:09:19 (15332): Successfully started VM. (PID = '4072')
2025-10-07 16:09:19 (15332): Reporting VM Process ID to BOINC.
2025-10-07 16:09:19 (15332): Guest Log: BIOS: VirtualBox 7.0.18
2025-10-07 16:09:19 (15332): Guest Log: CPUID EDX: 0x178bfbff
2025-10-07 16:09:19 (15332): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-07 16:09:19 (15332): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-07 16:09:19 (15332): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-07 16:09:19 (15332): Detected: Web Application Enabled (http://localhost:61988)
2025-10-07 16:09:19 (15332): Detected: Remote Desktop Enabled (localhost:61989)
2025-10-07 16:09:19 (15332): Preference change detected
2025-10-07 16:09:19 (15332): Setting CPU throttle for VM. (100%)
2025-10-07 16:09:19 (15332): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-07 16:09:21 (15332): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-07 16:09:21 (15332): Guest Log: BIOS: Booting from Hard Disk...
2025-10-07 16:09:25 (15332): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-07 16:09:25 (15332): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-07 16:09:25 (15332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-07 16:09:33 (15332): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-07 16:09:33 (15332): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-07 16:09:50 (15332): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-07 16:09:50 (15332): Guest Log: 00:00:00.000315 main     Log opened 2025-10-07T16:09:48.781948000Z
2025-10-07 16:09:50 (15332): Guest Log: 00:00:00.000601 main     OS Product: Linux
2025-10-07 16:09:50 (15332): Guest Log: 00:00:00.000687 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-07 16:09:50 (15332): Guest Log: 00:00:00.000769 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-07 16:09:50 (15332): Guest Log: 00:00:00.000888 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-07 16:09:50 (15332): Guest Log: 00:00:00.000891 main     Process ID: 1370
2025-10-07 16:09:50 (15332): Guest Log: 00:00:00.000893 main     Package type: LINUX_64BITS_GENERIC
2025-10-07 16:09:50 (15332): Guest Log: 00:00:00.002876 main     5.2.32 r132073 started. Verbose level = 0
2025-10-07 16:09:50 (15332): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-07 16:09:50 (15332): Guest Log: [INFO] Mounting shared directory
2025-10-07 16:09:50 (15332): Guest Log: [INFO] Checking for init_data.xml
2025-10-07 16:09:56 (15332): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-07 16:09:56 (15332): Guest Log: [INFO] Detected branch: prod
2025-10-07 16:09:56 (15332): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-07 16:09:56 (15332): Guest Log: Copying input files
2025-10-07 16:09:59 (15332): Guest Log: Copied input files into RunAtlas.
2025-10-07 16:10:00 (15332): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-07 16:10:00 (15332): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-07 16:10:00 (15332): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-07 16:10:00 (15332): Guest Log: Further information can be found at the LHC@home message board.
2025-10-07 16:10:00 (15332): Guest Log: 00:00:10.007963 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 210 950 473 000ns (GuestNow=1 759 878 599 738 457 000 ns GuestLast=1 759 853 388 787 984 000 ns fSetTimeLastLoop=true )
2025-10-07 16:10:10 (15332): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-07 16:10:10 (15332): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-07 16:10:10 (15332): Guest Log: 2.6.3.0 1650 0 30160 151450 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-07 16:10:12 (15332): Guest Log: copied the webapp to /var/www
2025-10-07 16:10:12 (15332): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-07 16:10:12 (15332): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-07 16:10:12 (15332): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-07 16:10:12 (15332): Guest Log:  *** Starting ATLAS job. (PandaID=6832974462 taskID=46376905) ***
2025-10-07 17:49:21 (15332): Status Report: Elapsed Time: '6000.000000'
2025-10-07 17:49:21 (15332): Status Report: CPU Time: '35016.875000'
2025-10-07 19:29:24 (15332): Status Report: Elapsed Time: '12000.000000'
2025-10-07 19:29:24 (15332): Status Report: CPU Time: '81404.312500'
2025-10-07 21:09:27 (15332): Status Report: Elapsed Time: '18000.000000'
2025-10-07 21:09:27 (15332): Status Report: CPU Time: '126578.328125'
2025-10-07 21:50:35 (15332): Guest Log:  *** Job finished ***
2025-10-07 21:50:35 (15332): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:49:57,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:49:57,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:27,118 | INFO     | [monitor] cgroup control has ended
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:28,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754326742848)>', '<ExcThread(monitor, started 139753655621376)>']
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:29,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:29,143 | INFO     | [monitor] control thread has ended
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:33,144 | INFO     | all workflow threads have been joined
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:33,144 | INFO     | end of generic workflow (traces error code: 0)
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:33,145 | INFO     | traces error code: 0
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:33,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:33,347 [wrapper] ==== pilot stdout END ====
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:33,364 [wrapper] ==== wrapper stdout RESUME ====
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:33,377 [wrapper] pilotpid: 6107
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:33,389 [wrapper] Pilot exit status: 0
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:34,370 [wrapper] pandaids: 6832974462
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:34,466 [wrapper] cleanup supervisor_pilot 23586 6108
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:34,483 [wrapper] Test setup, not cleaning
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:34,493 [wrapper] apfmon messages muted
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:34,503 [wrapper] ==== wrapper stdout END ====
2025-10-07 21:50:35 (15332): Guest Log: 2025-10-08 04:50:34,514 [wrapper] ==== wrapper stderr END ====
2025-10-07 21:50:35 (15332): Guest Log:  *** Error codes and diagnostics ***
2025-10-07 21:50:35 (15332): Guest Log:     "exeErrorCode": 0,
2025-10-07 21:50:35 (15332): Guest Log:     "exeErrorDiag": "",
2025-10-07 21:50:35 (15332): Guest Log:     "pilotErrorCode": 0,
2025-10-07 21:50:35 (15332): Guest Log:     "pilotErrorDiag": "",
2025-10-07 21:50:35 (15332): Guest Log:  *** Listing of results directory ***
2025-10-07 21:50:35 (15332): Guest Log: total 187028
2025-10-07 21:50:35 (15332): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  6 21:29 pilot3.tar.gz
2025-10-07 21:50:35 (15332): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  6 21:34 queuedata.json
2025-10-07 21:50:35 (15332): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  6 21:34 runpilot2-wrapper.sh
2025-10-07 21:50:35 (15332): Guest Log: -rwxr-xr-x. 1 atlas atlas      8906 Oct  7 23:09 init_data.xml
2025-10-07 21:50:35 (15332): Guest Log: -rwxr-xr-x. 1 atlas atlas    565600 Oct  7 23:09 input.tar.gz
2025-10-07 21:50:35 (15332): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  7 23:09 start_atlas.sh
2025-10-07 21:50:35 (15332): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  7 23:09 EVNT.46376901._004459.pool.root.1 -> /data/./ATLAS.root_0
2025-10-07 21:50:35 (15332): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Oct  7 23:10 pandaJob.out
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas    979849 Oct  7 23:12 agis_schedconf.cvmfs.json
2025-10-07 21:50:35 (15332): Guest Log: drwx------. 4 atlas atlas      4096 Oct  7 23:13 pilot3
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas 181525849 Oct  8 04:47 HITS.46376905._120131.pool.root.1
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas      1034 Oct  8 04:48 memory_monitor_summary.json
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  8 04:48 agis_ddmendpoints.agis.ALL.json
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas    543728 Oct  8 04:48 log.46376905._120131.job.log.tgz.1
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas        95 Oct  8 04:49 pilot_heartbeat.json
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas      7843 Oct  8 04:49 heartbeat.json
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas      4805 Oct  8 04:50 pilotlog.txt
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas   2541028 Oct  8 04:50 log.46376905._120131.job.log.1
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas       357 Oct  8 04:50 output.list
2025-10-07 21:50:35 (15332): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  8 04:50 runtime_log
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas   3102720 Oct  8 04:50 result.tar.gz
2025-10-07 21:50:35 (15332): Guest Log: -rw-r--r--. 1 atlas atlas      8640 Oct  8 04:50 runtime_log.err
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas       660 Oct  8 04:50 RmLKDmm17P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6pUNDmBAozyn.diag
2025-10-07 21:50:35 (15332): Guest Log: Looking for outputfile HITS.46376905._120131.pool.root.1
2025-10-07 21:50:35 (15332): Guest Log: HITS file was successfully produced
2025-10-07 21:50:35 (15332): Guest Log: -rw-------. 1 atlas atlas 181525849 Oct  8 04:47 /home/atlas/RunAtlas/HITS.46376905._120131.pool.root.1
2025-10-07 21:50:37 (15332): Guest Log: Successfully finished the ATLAS job!
2025-10-07 21:50:37 (15332): Guest Log: Copying the results back to the shared directory!
2025-10-07 21:50:37 (15332): Guest Log:  *** Contents of shared directory: ***
2025-10-07 21:50:37 (15332): Guest Log: total 391048
2025-10-07 21:50:37 (15332): Guest Log: -rwxrwxrwx. 1 root root 215202264 Oct  7 23:09 ATLAS.root_0
2025-10-07 21:50:37 (15332): Guest Log: -rwxrwxrwx. 1 root root 181525849 Oct  8 04:50 HITS.pool.root.1
2025-10-07 21:50:37 (15332): Guest Log: -rwxrwxrwx. 1 root root      8906 Oct  7 23:09 init_data.xml
2025-10-07 21:50:37 (15332): Guest Log: -rwxrwxrwx. 1 root root    565600 Oct  7 12:09 input.tar.gz
2025-10-07 21:50:37 (15332): Guest Log: -rwxrwxrwx. 1 root root   3102720 Oct  8 04:50 result.tar.gz
2025-10-07 21:50:37 (15332): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  7 12:09 start_atlas.sh
2025-10-07 21:50:37 (15332): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-07 21:50:37 (15332): VM Completion File Detected.
2025-10-07 21:50:37 (15332): Powering off VM.
2025-10-07 21:50:39 (15332): Successfully stopped VM.
2025-10-07 21:50:39 (15332): Deregistering VM. (boinc_4b78c3cf57de53ab, slot#19)
2025-10-07 21:50:39 (15332): Removing network bandwidth throttle group from VM.
2025-10-07 21:50:40 (15332): Removing VM from VirtualBox.
2025-10-07 21:50:45 (15332): called boinc_finish(0)

</stderr_txt>
]]>

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