Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-08 03:21:16 (4811): vboxwrapper version 26210
2025-10-08 03:21:16 (4811): BOINC client version: 8.2.4
2025-10-08 03:21:16 (4811): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-08 03:21:16 (4811): Successfully copied 'init_data.xml' to the shared directory.
2025-10-08 03:21:16 (4811): Create VM. (boinc_73999ebef73b8664, slot#1)
2025-10-08 03:21:16 (4811): Setting Memory Size for VM. (4400MB)
2025-10-08 03:21:16 (4811): Setting CPU Count for VM. (4)
2025-10-08 03:21:17 (4811): Setting Chipset Options for VM.
2025-10-08 03:21:17 (4811): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-08 03:21:17 (4811): Setting Boot Options for VM.
2025-10-08 03:21:17 (4811): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-08 03:21:17 (4811): Enabling VM Network Access.
2025-10-08 03:21:17 (4811): Disabling USB Support for VM.
2025-10-08 03:21:17 (4811): Disabling COM Port Support for VM.
2025-10-08 03:21:17 (4811): Disabling LPT Port Support for VM.
2025-10-08 03:21:17 (4811): Disabling Audio Support for VM.
2025-10-08 03:21:18 (4811): Disabling Clipboard Support for VM.
2025-10-08 03:21:18 (4811): Disabling Drag and Drop Support for VM.
2025-10-08 03:21:18 (4811): Adding storage controller(s) to VM.
2025-10-08 03:21:18 (4811): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-08 03:21:19 (4811): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-08 03:21:19 (4811): forwarding host port 51997 to guest port 80
2025-10-08 03:21:19 (4811): Enabling remote desktop for VM.
2025-10-08 03:21:19 (4811): Required extension pack not installed, remote desktop not enabled.
2025-10-08 03:21:19 (4811): Enabling shared directory for VM.
2025-10-08 03:21:19 (4811): Starting VM using VBoxManage interface. (boinc_73999ebef73b8664, slot#1)
2025-10-08 03:21:21 (4811): Successfully started VM. (PID = '5340')
2025-10-08 03:21:21 (4811): Reporting VM Process ID to BOINC.
2025-10-08 03:21:21 (4811): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-08 03:21:21 (4811): Guest Log: CPUID EDX: 0x178bfbff
2025-10-08 03:21:21 (4811): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-08 03:21:21 (4811): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-08 03:21:21 (4811): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-08 03:21:21 (4811): Detected: Web Application Enabled (http://localhost:51997)
2025-10-08 03:21:22 (4811): VM state change detected. (old = 'running', new = 'paused')
2025-10-08 03:21:39 (4811): Preference change detected
2025-10-08 03:21:39 (4811): Setting CPU throttle for VM. (90%)
2025-10-08 03:21:39 (4811): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-08 03:21:40 (4811): VM state change detected. (old = 'paused', new = 'running')
2025-10-08 03:21:41 (4811): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-08 03:21:41 (4811): Guest Log: BIOS: Booting from Hard Disk...
2025-10-08 03:21:44 (4811): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-08 03:21:44 (4811): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-08 03:21:44 (4811): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-08 03:21:52 (4811): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-08 03:21:52 (4811): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-08 03:22:11 (4811): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-08 03:22:11 (4811): Guest Log: 00:00:00.000474 main     Log opened 2025-10-07T19:21:52.195728000Z
2025-10-08 03:22:11 (4811): Guest Log: 00:00:00.000731 main     OS Product: Linux
2025-10-08 03:22:11 (4811): Guest Log: 00:00:00.000796 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-08 03:22:11 (4811): Guest Log: 00:00:00.000849 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-08 03:22:11 (4811): Guest Log: 00:00:00.000903 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-08 03:22:11 (4811): Guest Log: 00:00:00.000905 main     Process ID: 1276
2025-10-08 03:22:11 (4811): Guest Log: 00:00:00.000906 main     Package type: LINUX_64BITS_GENERIC
2025-10-08 03:22:11 (4811): Guest Log: 00:00:00.003322 main     5.2.32 r132073 started. Verbose level = 0
2025-10-08 03:22:12 (4811): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-08 03:22:12 (4811): Guest Log: [INFO] Mounting shared directory
2025-10-08 03:22:12 (4811): Guest Log: [INFO] Checking for init_data.xml
2025-10-08 03:22:51 (4811): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-08 03:22:51 (4811): Guest Log: [INFO] Detected branch: prod
2025-10-08 03:22:51 (4811): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-08 03:22:51 (4811): Guest Log: Copying input files
2025-10-08 03:22:53 (4811): Guest Log: Copied input files into RunAtlas.
2025-10-08 03:22:53 (4811): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-08 03:22:53 (4811): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-08 03:22:53 (4811): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-08 03:22:53 (4811): Guest Log: Further information can be found at the LHC@home message board.
2025-10-08 03:23:08 (4811): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-08 03:23:09 (4811): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-08 03:23:09 (4811): Guest Log: 2.6.3.0 1574 0 30164 151445 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-08 03:23:13 (4811): Guest Log: copied the webapp to /var/www
2025-10-08 03:23:13 (4811): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-08 03:23:13 (4811): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-08 03:23:13 (4811): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-08 03:23:13 (4811): Guest Log:  *** Starting ATLAS job. (PandaID=6833172172 taskID=46376905) ***
2025-10-08 05:00:39 (4811): Status Report: Elapsed Time: '6000.000000'
2025-10-08 05:00:39 (4811): Status Report: CPU Time: '17709.560000'
2025-10-08 06:39:40 (4811): Status Report: Elapsed Time: '12000.000000'
2025-10-08 06:39:40 (4811): Status Report: CPU Time: '38481.810000'
2025-10-08 08:18:40 (4811): Status Report: Elapsed Time: '18000.000000'
2025-10-08 08:18:40 (4811): Status Report: CPU Time: '59254.910000'
2025-10-08 09:57:41 (4811): Status Report: Elapsed Time: '24000.000000'
2025-10-08 09:57:41 (4811): Status Report: CPU Time: '80028.150000'
2025-10-08 10:06:48 (4811): Guest Log:  *** Job finished ***
2025-10-08 10:06:48 (4811): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:32,879 | INFO     | all workflow threads have been joined
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:32,879 | INFO     | end of generic workflow (traces error code: 0)
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:32,879 | INFO     | traces error code: 0
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:32,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,393 | INFO     | PID=5985 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,394 | INFO     | found 0 job(s) in 20 queues
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,394 | INFO     | [monitor] control thread has ended
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,574 [wrapper] ==== pilot stdout END ====
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,588 [wrapper] ==== wrapper stdout RESUME ====
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,602 [wrapper] pilotpid: 5985
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,617 [wrapper] Pilot exit status: 0
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,893 [wrapper] pandaids: 6833172172
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,944 [wrapper] cleanup supervisor_pilot 28986 5986
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,957 [wrapper] Test setup, not cleaning
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,965 [wrapper] apfmon messages muted
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,974 [wrapper] ==== wrapper stdout END ====
2025-10-08 10:06:48 (4811): Guest Log: 2025-10-08 02:06:35,982 [wrapper] ==== wrapper stderr END ====
2025-10-08 10:06:48 (4811): Guest Log:  *** Error codes and diagnostics ***
2025-10-08 10:06:48 (4811): Guest Log:     "exeErrorCode": 0,
2025-10-08 10:06:48 (4811): Guest Log:     "exeErrorDiag": "",
2025-10-08 10:06:48 (4811): Guest Log:     "pilotErrorCode": 0,
2025-10-08 10:06:48 (4811): Guest Log:     "pilotErrorDiag": "",
2025-10-08 10:06:48 (4811): Guest Log:  *** Listing of results directory ***
2025-10-08 10:06:48 (4811): Guest Log: total 190584
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  7 06:32 pilot3.tar.gz
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  7 06:41 queuedata.json
2025-10-08 10:06:48 (4811): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  7 06:41 runpilot2-wrapper.sh
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 atlas atlas    565603 Oct  7 19:22 input.tar.gz
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct  7 19:22 start_atlas.sh
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 atlas atlas      5972 Oct  7 19:22 init_data.xml
2025-10-08 10:06:48 (4811): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  7 19:22 EVNT.46376901._004838.pool.root.1 -> /data/./ATLAS.root_0
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Oct  7 19:22 pandaJob.out
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas    979864 Oct  7 19:24 agis_schedconf.cvmfs.json
2025-10-08 10:06:48 (4811): Guest Log: drwx------. 4 atlas atlas      4096 Oct  7 19:25 pilot3
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas 184172204 Oct  8 02:04 HITS.46376905._129890.pool.root.1
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas      1028 Oct  8 02:05 memory_monitor_summary.json
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  8 02:05 agis_ddmendpoints.agis.ALL.json
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas    504786 Oct  8 02:05 log.46376905._129890.job.log.tgz.1
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas      7816 Oct  8 02:06 heartbeat.json
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas        95 Oct  8 02:06 pilot_heartbeat.json
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas       744 Oct  8 02:06 pilotlog.txt
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas   3081488 Oct  8 02:06 log.46376905._129890.job.log.1
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas       357 Oct  8 02:06 output.list
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  8 02:06 runtime_log
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas   3604480 Oct  8 02:06 result.tar.gz
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas       667 Oct  8 02:06 YV2NDm6YGQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQMWNDmyayEIm.diag
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 atlas atlas      8667 Oct  8 02:06 runtime_log.err
2025-10-08 10:06:48 (4811): Guest Log: Looking for outputfile HITS.46376905._129890.pool.root.1
2025-10-08 10:06:48 (4811): Guest Log: HITS file was successfully produced
2025-10-08 10:06:48 (4811): Guest Log: -rw-------. 1 atlas atlas 184172204 Oct  8 02:04 /home/atlas/RunAtlas/HITS.46376905._129890.pool.root.1
2025-10-08 10:06:48 (4811): Guest Log: Successfully finished the ATLAS job!
2025-10-08 10:06:48 (4811): Guest Log: Copying the results back to the shared directory!
2025-10-08 10:06:48 (4811): Guest Log:  *** Contents of shared directory: ***
2025-10-08 10:06:48 (4811): Guest Log: total 214632
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 root root 215581175 Oct  7 19:21 ATLAS.root_0
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 root root      5972 Oct  7 19:21 init_data.xml
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 root root    565603 Oct  7 19:21 input.tar.gz
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 root root   3604480 Oct  8  2025 result.tar.gz
2025-10-08 10:06:48 (4811): Guest Log: -rw-r--r--. 1 root root     15120 Oct  7 19:21 start_atlas.sh
2025-10-08 10:06:48 (4811): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-08 10:06:48 (4811): VM Completion File Detected.
2025-10-08 10:06:48 (4811): Powering off VM.
2025-10-08 10:06:51 (4811): Successfully stopped VM.
2025-10-08 10:06:51 (4811): Deregistering VM. (boinc_73999ebef73b8664, slot#1)
2025-10-08 10:06:51 (4811): Removing network bandwidth throttle group from VM.
2025-10-08 10:06:52 (4811): Removing VM from VirtualBox.
2025-10-08 10:06:57 (4811): called boinc_finish(0)

</stderr_txt>
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