Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:19:10 (11777): wrapper (7.7.26015): starting
21:19:10 (11777): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 21:19:10] Arguments: --nthreads 8
[2025-10-07 21:19:10] Threads: 8
[2025-10-07 21:19:10] Checking for CVMFS
[2025-10-07 21:19:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 21:19:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 21:19:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 21:19:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 21:19:13] 2.11.2.0 11231 213738 138908 151445 0 60 23693873 25165824 4632 130560 0 114066291 99.883 62079539 4207 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 21:19:13] CVMFS is ok
[2025-10-07 21:19:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 21:19:13] Checking for apptainer binary...
[2025-10-07 21:19:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 21:19:13] Running /usr/bin/apptainer --version
[2025-10-07 21:19:13] apptainer version 1.3.2-1.el7
[2025-10-07 21:19:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 21:19:30] cg-vwn244.simple-grid.lan
[2025-10-07 21:19:30] apptainer works
[2025-10-07 21:19:30] Set ATHENA_PROC_NUMBER=8
[2025-10-07 21:19:30] Set ATHENA_CORE_NUMBER=8
[2025-10-07 21:19:30] Starting ATLAS job with PandaID=6833171515
[2025-10-07 21:19:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 01:13:37]  *** The last 200 lines of the pilot log: ***
[2025-10-08 01:13:37] 2025-10-07 23:12:26,070 | INFO     | sum of square deviations: 3212467674.5
[2025-10-08 01:13:37] 2025-10-07 23:12:26,071 | INFO     | sum of deviations: 63001364341.5
[2025-10-08 01:13:37] 2025-10-07 23:12:26,071 | INFO     | mean x: 1759872022.5
[2025-10-08 01:13:37] 2025-10-07 23:12:26,071 | INFO     | mean y: 2438580.2155963304
[2025-10-08 01:13:37] 2025-10-07 23:12:26,071 | INFO     | -- intersect: -34511321469.1184
[2025-10-08 01:13:37] 2025-10-07 23:12:26,072 | INFO     | intersect: -34511321469.1184
[2025-10-08 01:13:37] 2025-10-07 23:12:26,079 | INFO     | chi2: 7.84424395854707
[2025-10-08 01:13:37] 2025-10-07 23:12:26,080 | INFO     | sum of square deviations: 2996454322.0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,081 | INFO     | sum of deviations: 75743615880.99998
[2025-10-08 01:13:37] 2025-10-07 23:12:26,082 | INFO     | mean x: 1759871870.0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,082 | INFO     | mean y: 2447388.164319249
[2025-10-08 01:13:37] 2025-10-07 23:12:26,082 | INFO     | -- intersect: -44483149452.86676
[2025-10-08 01:13:37] 2025-10-07 23:12:26,082 | INFO     | intersect: -44483149452.86676
[2025-10-08 01:13:37] 2025-10-07 23:12:26,082 | INFO     | chi2: 7.157636578779858
[2025-10-08 01:13:37] 2025-10-07 23:12:26,082 | INFO     | current chi2=7.157636578779858 (change=8.753009001193622 %)
[2025-10-08 01:13:37] 2025-10-07 23:12:26,082 | INFO     | right removable region: 212
[2025-10-08 01:13:37] 2025-10-07 23:12:26,083 | INFO     | sum of square deviations: 2996454322.0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,085 | INFO     | sum of deviations: -12406921333.000015
[2025-10-08 01:13:37] 2025-10-07 23:12:26,085 | INFO     | mean x: 1759872175.0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,085 | INFO     | mean y: 2491779.431924883
[2025-10-08 01:13:37] 2025-10-07 23:12:26,085 | INFO     | -- intersect: 7289302551.4336195
[2025-10-08 01:13:37] 2025-10-07 23:12:26,085 | INFO     | intersect: 7289302551.4336195
[2025-10-08 01:13:37] 2025-10-07 23:12:26,085 | INFO     | chi2: 2.857890652990594
[2025-10-08 01:13:37] 2025-10-07 23:12:26,085 | INFO     | current chi2=2.857890652990594 (change=63.567035037498506 %)
[2025-10-08 01:13:37] 2025-10-07 23:12:26,086 | INFO     | sum of square deviations: 2790348132.0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,087 | INFO     | sum of deviations: -55918642843.0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,088 | INFO     | mean x: 1759872327.5
[2025-10-08 01:13:37] 2025-10-07 23:12:26,088 | INFO     | mean y: 2523802.25
[2025-10-08 01:13:37] 2025-10-07 23:12:26,088 | INFO     | -- intersect: 35270407046.70232
[2025-10-08 01:13:37] 2025-10-07 23:12:26,088 | INFO     | intersect: 35270407046.70232
[2025-10-08 01:13:37] 2025-10-07 23:12:26,088 | INFO     | chi2: 1.0216078902366124
[2025-10-08 01:13:37] 2025-10-07 23:12:26,088 | INFO     | current chi2=1.0216078902366124 (change=64.25307983118364 %)
[2025-10-08 01:13:37] 2025-10-07 23:12:26,089 | INFO     | sum of square deviations: 2593916542.0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,090 | INFO     | sum of deviations: -55465748160.000015
[2025-10-08 01:13:37] 2025-10-07 23:12:26,090 | INFO     | mean x: 1759872480.0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,090 | INFO     | mean y: 2523388.4532019706
[2025-10-08 01:13:37] 2025-10-07 23:12:26,090 | INFO     | -- intersect: 37633897485.8372
[2025-10-08 01:13:37] 2025-10-07 23:12:26,091 | INFO     | intersect: 37633897485.8372
[2025-10-08 01:13:37] 2025-10-07 23:12:26,091 | INFO     | chi2: 0.9855105325361724
[2025-10-08 01:13:37] 2025-10-07 23:12:26,091 | INFO     | current chi2=0.9855105325361724 (change=3.5333867372617442 %)
[2025-10-08 01:13:37] 2025-10-07 23:12:26,091 | INFO     | left removable region: 30
[2025-10-08 01:13:37] 2025-10-07 23:12:26,091 | INFO     | sum of square deviations: 1869302025.5
[2025-10-08 01:13:37] 2025-10-07 23:12:26,093 | INFO     | sum of deviations: -20947348699.000004
[2025-10-08 01:13:37] 2025-10-07 23:12:26,093 | INFO     | mean x: 1759872754.5
[2025-10-08 01:13:37] 2025-10-07 23:12:26,093 | INFO     | mean y: 2516991.7252747254
[2025-10-08 01:13:37] 2025-10-07 23:12:26,093 | INFO     | -- intersect: 19723604195.12708
[2025-10-08 01:13:37] 2025-10-07 23:12:26,093 | INFO     | intersect: 19723604195.12708
[2025-10-08 01:13:37] 2025-10-07 23:12:26,093 | INFO     | chi2: 0.14720583537853707
[2025-10-08 01:13:37] 2025-10-07 23:12:26,094 | INFO     | -- intersect: 19723604195.12708
[2025-10-08 01:13:37] 2025-10-07 23:12:26,094 | INFO     | current memory leak: -11.21 B/s (using 182 data points, chi2=0.15)
[2025-10-08 01:13:37] 2025-10-07 23:12:26,100 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-08 01:13:37] 2025-10-07 23:12:26,100 | INFO     | ..............................
[2025-10-08 01:13:37] 2025-10-07 23:12:26,100 | INFO     | . Timing measurements:
[2025-10-08 01:13:37] 2025-10-07 23:12:26,100 | INFO     | . get job = 0 s
[2025-10-08 01:13:37] 2025-10-07 23:12:26,100 | INFO     | . initial setup = 7 s
[2025-10-08 01:13:37] 2025-10-07 23:12:26,100 | INFO     | . payload setup = 106 s
[2025-10-08 01:13:37] 2025-10-07 23:12:26,100 | INFO     | . stage-in = 0 s
[2025-10-08 01:13:37] 2025-10-07 23:12:26,101 | INFO     | . payload execution = 13396 s
[2025-10-08 01:13:37] 2025-10-07 23:12:26,101 | INFO     | . stage-out = 3 s
[2025-10-08 01:13:37] 2025-10-07 23:12:26,101 | INFO     | . log creation = 1 s
[2025-10-08 01:13:37] 2025-10-07 23:12:26,101 | INFO     | ..............................
[2025-10-08 01:13:37] 2025-10-07 23:12:26,248 | INFO     | 
[2025-10-08 01:13:37] 2025-10-07 23:12:26,248 | INFO     | job summary report
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | --------------------------------------------------
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | PanDA job id: 6833171515
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | task id: 46376905
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | errors: (none)
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | pilot state: finished 
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | transexitcode: 0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | exeerrorcode: 0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | exeerrordiag: 
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | exitcode: 0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,249 | INFO     | exitmsg: OK
[2025-10-08 01:13:37] 2025-10-07 23:12:26,250 | INFO     | cpuconsumptiontime: 48388 s
[2025-10-08 01:13:37] 2025-10-07 23:12:26,250 | INFO     | nevents: 400
[2025-10-08 01:13:37] 2025-10-07 23:12:26,250 | INFO     | neventsw: 0
[2025-10-08 01:13:37] 2025-10-07 23:12:26,250 | INFO     | pid: 22138
[2025-10-08 01:13:37] 2025-10-07 23:12:26,250 | INFO     | pgrp: 22138
[2025-10-08 01:13:37] 2025-10-07 23:12:26,250 | INFO     | corecount: 8
[2025-10-08 01:13:37] 2025-10-07 23:12:26,250 | INFO     | event service: False
[2025-10-08 01:13:37] 2025-10-07 23:12:26,250 | INFO     | sizes: {0: 2348594, 1: 2348849, 2: 2348849, 12: 2348877, 23: 2348905, 34: 2348933, 44: 2349089, 55: 2349117, 66: 2349145, 77: 2349173, 83: 2349491, 87: 2349827, 13
[2025-10-08 01:13:37] 2025-10-07 23:12:26,250 | INFO     | --------------------------------------------------
[2025-10-08 01:13:37] 2025-10-07 23:12:26,250 | INFO     | 
[2025-10-08 01:13:37] 2025-10-07 23:12:26,251 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-08 01:13:37] 2025-10-07 23:12:26,436 | INFO     | time since job start (13761s) is within the limit (172800.0s)
[2025-10-08 01:13:37] 2025-10-07 23:12:26,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,509 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,509 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,511 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 01:13:37] 2025-10-07 23:12:26,511 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,511 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 01:13:37] 2025-10-07 23:12:26,511 | INFO     | job 6833171515 has completed (purged errors)
[2025-10-08 01:13:37] 2025-10-07 23:12:26,511 | INFO     | overall cleanup function is called
[2025-10-08 01:13:37] 2025-10-07 23:12:27,521 | INFO     | --- collectZombieJob: --- 10, [22138]
[2025-10-08 01:13:37] 2025-10-07 23:12:27,521 | INFO     | zombie collector waiting for pid 22138
[2025-10-08 01:13:37] 2025-10-07 23:12:27,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 01:13:37] 2025-10-07 23:12:27,522 | INFO     | collected zombie processes
[2025-10-08 01:13:37] 2025-10-07 23:12:27,522 | INFO     | will attempt to kill all subprocesses of pid=22138
[2025-10-08 01:13:37] 2025-10-07 23:12:27,652 | INFO     | process IDs to be killed: [22138] (in reverse order)
[2025-10-08 01:13:37] 2025-10-07 23:12:28,193 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 01:13:37] 2025-10-07 23:12:28,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 01:13:37] 2025-10-07 23:12:28,196 | INFO     | did not find any defunct processes belonging to 22138
[2025-10-08 01:13:37] 2025-10-07 23:12:28,208 | INFO     | did not find any defunct processes belonging to 22138
[2025-10-08 01:13:37] 2025-10-07 23:12:28,208 | INFO     | ready for new job
[2025-10-08 01:13:37] 2025-10-07 23:12:28,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 01:13:37] 2025-10-07 23:12:28,211 | INFO     | ***************************************
[2025-10-08 01:13:37] 2025-10-07 23:12:28,211 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 01:13:37] 2025-10-07 23:12:28,211 | INFO     | ***************************************
[2025-10-08 01:13:37] 2025-10-07 23:12:28,211 | INFO     | 
[2025-10-08 01:13:37] 2025-10-07 23:12:28,212 | INFO     | pilot is running in a VM
[2025-10-08 01:13:37] 2025-10-07 23:12:28,212 | INFO     | architecture information:
[2025-10-08 01:13:37] 2025-10-07 23:12:28,239 | INFO     | executing command: cat /etc/os-release
[2025-10-08 01:13:37] 2025-10-07 23:12:28,385 | INFO     | cat /etc/os-release:
[2025-10-08 01:13:37] NAME="CentOS Linux"
[2025-10-08 01:13:37] VERSION="7 (Core)"
[2025-10-08 01:13:37] ID="centos"
[2025-10-08 01:13:37] ID_LIKE="rhel fedora"
[2025-10-08 01:13:37] VERSION_ID="7"
[2025-10-08 01:13:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 01:13:37] ANSI_COLOR="0;31"
[2025-10-08 01:13:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 01:13:37] HOME_URL="https://www.centos.org/"
[2025-10-08 01:13:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 01:13:37] 
[2025-10-08 01:13:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 01:13:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 01:13:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 01:13:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 01:13:37] 
[2025-10-08 01:13:37] 2025-10-07 23:12:28,386 | INFO     | ***************************************
[2025-10-08 01:13:37] 2025-10-07 23:12:28,889 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-08 01:13:37] 2025-10-07 23:12:29,011 | INFO     | sufficient remaining disk space (496553164800 B)
[2025-10-08 01:13:37] 2025-10-07 23:12:29,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 01:13:37] 2025-10-07 23:12:29,012 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 01:13:37] 2025-10-07 23:12:29,012 | INFO     | update_server=False
[2025-10-08 01:13:37] 2025-10-07 23:12:29,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 01:13:37] 2025-10-07 23:12:29,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 01:13:37] 2025-10-07 23:12:29,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 01:13:37] 2025-10-07 23:12:29,405 | INFO     | all data control threads have been joined
[2025-10-08 01:13:37] 2025-10-07 23:12:29,486 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 01:13:37] 2025-10-07 23:12:29,487 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 01:13:37] 2025-10-07 23:12:29,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 01:13:37] 2025-10-07 23:12:29,487 | INFO     | will abort loop
[2025-10-08 01:13:37] 2025-10-07 23:12:29,645 | INFO     | all payload control threads have been joined
[2025-10-08 01:13:37] 2025-10-07 23:12:29,844 | INFO     | all job control threads have been joined
[2025-10-08 01:13:37] 2025-10-07 23:12:30,018 | INFO     | [job] retrieve thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:30,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:30,411 | INFO     | [data] control thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:30,433 | INFO     | [job] validate thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:30,492 | INFO     | [job] job monitor thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:30,575 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:30,651 | INFO     | [payload] control thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:30,748 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:30,846 | INFO     | [payload] validate_post thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:30,850 | INFO     | [job] control thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:30,935 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:31,017 | INFO     | [data] copytool_out thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:31,037 | INFO     | [data] copytool_in thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:31,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 01:13:37] 2025-10-07 23:12:31,288 | INFO     | [payload] failed_post thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:32,264 | INFO     | [job] queue monitor thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:33,022 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 01:13:37] 2025-10-07 23:12:59,639 | INFO     | PID=15572 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 01:13:37] 2025-10-07 23:12:59,639 | INFO     | .. there are 9 such processes running
[2025-10-08 01:13:37] 2025-10-07 23:12:59,640 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 01:13:37] 2025-10-07 23:12:59,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 01:13:37] 2025-10-07 23:12:59,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 01:13:37] 2025-10-07 23:13:28,162 | INFO     | [monitor] cgroup control has ended
[2025-10-08 01:13:37] 2025-10-07 23:13:29,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139645176506176)>', '<ExcThread(monitor, started 139644612110080)>']
[2025-10-08 01:13:37] 2025-10-07 23:13:29,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 01:13:37] 2025-10-07 23:13:29,822 | INFO     | [monitor] control thread has ended
[2025-10-08 01:13:37] 2025-10-07 23:13:34,810 | INFO     | all workflow threads have been joined
[2025-10-08 01:13:37] 2025-10-07 23:13:34,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 01:13:37] 2025-10-07 23:13:34,811 | INFO     | traces error code: 0
[2025-10-08 01:13:37] 2025-10-07 23:13:34,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 01:13:37] 2025-10-07 23:13:35,247 [wrapper] ==== pilot stdout END ====
[2025-10-08 01:13:37] 2025-10-07 23:13:35,355 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 01:13:37] 2025-10-07 23:13:35,450 [wrapper] pilotpid: 15572
[2025-10-08 01:13:37] 2025-10-07 23:13:35,550 [wrapper] Pilot exit status: 0
[2025-10-08 01:13:37] 2025-10-07 23:13:35,892 [wrapper] pandaids: 6833171515
[2025-10-08 01:13:37] 2025-10-07 23:13:36,310 [wrapper] cleanup supervisor_pilot   895 15573
[2025-10-08 01:13:37] 2025-10-07 23:13:36,370 [wrapper] Test setup, not cleaning
[2025-10-08 01:13:37] 2025-10-07 23:13:36,401 [wrapper] apfmon messages muted
[2025-10-08 01:13:37] 2025-10-07 23:13:36,439 [wrapper] ==== wrapper stdout END ====
[2025-10-08 01:13:37] 2025-10-07 23:13:36,465 [wrapper] ==== wrapper stderr END ====
[2025-10-08 01:13:37]  *** Error codes and diagnostics ***
[2025-10-08 01:13:37]     "exeErrorCode": 0,
[2025-10-08 01:13:37]     "exeErrorDiag": "",
[2025-10-08 01:13:37]     "pilotErrorCode": 0,
[2025-10-08 01:13:37]     "pilotErrorDiag": "",
[2025-10-08 01:13:37]  *** Listing of results directory ***
[2025-10-08 01:13:37] total 394272
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc      5112 Oct  7 08:31 queuedata.json
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc    552446 Oct  7 08:32 pilot3.tar.gz
[2025-10-08 01:13:37] -rwx------. 1 boinc boinc     36292 Oct  7 08:32 runpilot2-wrapper.sh
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc       100 Oct  7 21:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 01:13:37] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 21:19 run_atlas
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc       105 Oct  7 21:19 job.xml
[2025-10-08 01:13:37] -rw-r--r--. 2 boinc boinc 214275190 Oct  7 21:19 EVNT.46376901._004833.pool.root.1
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc      6391 Oct  7 21:19 init_data.xml
[2025-10-08 01:13:37] -rw-r--r--. 2 boinc boinc     15120 Oct  7 21:19 start_atlas.sh
[2025-10-08 01:13:37] drwxrwx--x. 2 boinc boinc        68 Oct  7 21:19 shared
[2025-10-08 01:13:37] -rw-r--r--. 2 boinc boinc    565604 Oct  7 21:19 input.tar.gz
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc         0 Oct  7 21:19 boinc_lockfile
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc      2521 Oct  7 21:19 pandaJob.out
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc    979864 Oct  7 21:23 agis_schedconf.cvmfs.json
[2025-10-08 01:13:37] drwx------. 4 boinc boinc      4096 Oct  7 21:23 pilot3
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc 181008134 Oct  8 01:09 HITS.46376905._129775.pool.root.1
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc       531 Oct  8 01:09 boinc_task_state.xml
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc      1016 Oct  8 01:10 memory_monitor_summary.json
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc   1560401 Oct  8 01:10 agis_ddmendpoints.agis.ALL.json
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc    448272 Oct  8 01:10 log.46376905._129775.job.log.tgz.1
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc      7785 Oct  8 01:12 heartbeat.json
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc        95 Oct  8 01:12 pilot_heartbeat.json
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc        28 Oct  8 01:13 wrapper_checkpoint.txt
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc      8192 Oct  8 01:13 boinc_mmap_file
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc      5071 Oct  8 01:13 pilotlog.txt
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc   1837435 Oct  8 01:13 log.46376905._129775.job.log.1
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc       357 Oct  8 01:13 output.list
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc       620 Oct  8 01:13 runtime_log
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc   2304000 Oct  8 01:13 result.tar.gz
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc      8717 Oct  8 01:13 runtime_log.err
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc       656 Oct  8 01:13 N7WKDmyQGQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTBLMDmFxIeIn.diag
[2025-10-08 01:13:37] -rw-r--r--. 1 boinc boinc     20665 Oct  8 01:13 stderr.txt
[2025-10-08 01:13:37] HITS file was successfully produced:
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc 181008134 Oct  8 01:09 shared/HITS.pool.root.1
[2025-10-08 01:13:37]  *** Contents of shared directory: ***
[2025-10-08 01:13:37] total 388848
[2025-10-08 01:13:37] -rw-r--r--. 2 boinc boinc 214275190 Oct  7 21:19 ATLAS.root_0
[2025-10-08 01:13:37] -rw-r--r--. 2 boinc boinc     15120 Oct  7 21:19 start_atlas.sh
[2025-10-08 01:13:37] -rw-r--r--. 2 boinc boinc    565604 Oct  7 21:19 input.tar.gz
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc 181008134 Oct  8 01:09 HITS.pool.root.1
[2025-10-08 01:13:37] -rw-------. 1 boinc boinc   2304000 Oct  8 01:13 result.tar.gz
01:13:39 (11777): run_atlas exited; CPU time 48588.480365
01:13:39 (11777): called boinc_finish(0)

</stderr_txt>
]]>

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