Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:30:53 (1415084): wrapper (7.7.26015): starting
21:30:53 (1415084): wrapper: running run_atlas (--nthreads 3)
[2025-10-07 21:30:53] Arguments: --nthreads 3
[2025-10-07 21:30:53] Threads: 3
[2025-10-07 21:30:53] Checking for CVMFS
[2025-10-07 21:30:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 21:30:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 21:30:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 21:30:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 21:30:53] 2.9.2.0 771063 1898 79312 151445 1 57 29712669 36864000 0 130560 0 1688962 99.992 65519 1253 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-07 21:30:53] CVMFS is ok
[2025-10-07 21:30:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 21:30:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 21:30:53] Further information can be found at the LHC@home message board.
[2025-10-07 21:30:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 21:30:53] Checking for apptainer binary...
[2025-10-07 21:30:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 21:30:53] Running /usr/bin/apptainer --version
[2025-10-07 21:30:53] apptainer version 1.4.1-1.1
[2025-10-07 21:30:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 21:30:53] thA349
[2025-10-07 21:30:53] apptainer works
[2025-10-07 21:30:54] Set ATHENA_PROC_NUMBER=3
[2025-10-07 21:30:54] Set ATHENA_CORE_NUMBER=3
[2025-10-07 21:30:54] Starting ATLAS job with PandaID=6833165624
[2025-10-07 21:30:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 22:46:11]  *** The last 200 lines of the pilot log: ***
[2025-10-07 22:46:11] 2025-10-07 20:45:35,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 22:46:11] 2025-10-07 20:45:35,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 22:46:11] 2025-10-07 20:45:36,648 | INFO     | all data control threads have been joined
[2025-10-07 22:46:11] 2025-10-07 20:45:36,940 | INFO     | all payload control threads have been joined
[2025-10-07 22:46:11] 2025-10-07 20:45:36,940 | INFO     | [job] retrieve thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:36,940 | INFO     | [job] job monitor thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:36,941 | INFO     | [job] queue monitor thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:37,058 | INFO     | [payload] failed_post thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:37,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 22:46:11] 2025-10-07 20:45:37,467 | INFO     | all job control threads have been joined
[2025-10-07 22:46:11] 2025-10-07 20:45:37,627 | INFO     | [data] copytool_in thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:37,629 | INFO     | [payload] validate_post thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:37,654 | INFO     | [data] control thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:37,946 | INFO     | [payload] control thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:38,003 | INFO     | [job] validate thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:38,113 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:38,113 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:38,124 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:38,473 | INFO     | [job] control thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:39,292 | INFO     | [data] copytool_out thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:39,942 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:46,237 | INFO     | job.realtimelogging is not enabled
[2025-10-07 22:46:11] 2025-10-07 20:45:47,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 22:46:11] 2025-10-07 20:45:59,036 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-07 22:46:11] 2025-10-07 20:46:05,109 | INFO     | [monitor] cgroup control has ended
[2025-10-07 22:46:11] 2025-10-07 20:46:06,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809261754176)>', '<ExcThread(monitor, started 139808491955968)>']
[2025-10-07 22:46:11] 2025-10-07 20:46:06,819 | INFO     | PID=1418801 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 22:46:11] 2025-10-07 20:46:06,819 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 22:46:11] 2025-10-07 20:46:06,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 22:46:11] 2025-10-07 20:46:06,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 22:46:11] 2025-10-07 20:46:06,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 22:46:11] 2025-10-07 20:46:06,819 | INFO     | [monitor] control thread has ended
[2025-10-07 22:46:11] 2025-10-07 20:46:11,375 | INFO     | all workflow threads have been joined
[2025-10-07 22:46:11] 2025-10-07 20:46:11,376 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 22:46:11] 2025-10-07 20:46:11,376 | INFO     | traces error code: 0
[2025-10-07 22:46:11] 2025-10-07 20:46:11,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 22:46:11] 2025-10-07 20:46:11,425 [wrapper] ==== pilot stdout END ====
[2025-10-07 22:46:11] 2025-10-07 20:46:11,427 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 22:46:11] 2025-10-07 20:46:11,430 [wrapper] pilotpid: 1418801
[2025-10-07 22:46:11] 2025-10-07 20:46:11,432 [wrapper] Pilot exit status: 0
[2025-10-07 22:46:11] 2025-10-07 20:46:11,440 [wrapper] pandaids: 6833165624
[2025-10-07 22:46:11] 2025-10-07 20:46:11,457 [wrapper] cleanup supervisor_pilot 1439855 1418802
[2025-10-07 22:46:11] 2025-10-07 20:46:11,459 [wrapper] Test setup, not cleaning
[2025-10-07 22:46:11] 2025-10-07 20:46:11,462 [wrapper] apfmon messages muted
[2025-10-07 22:46:11] 2025-10-07 20:46:11,464 [wrapper] ==== wrapper stdout END ====
[2025-10-07 22:46:11] 2025-10-07 20:46:11,466 [wrapper] ==== wrapper stderr END ====
[2025-10-07 22:46:11]  *** Error codes and diagnostics ***
[2025-10-07 22:46:11]     "exeErrorCode": 0,
[2025-10-07 22:46:11]     "exeErrorDiag": "",
[2025-10-07 22:46:11]     "pilotErrorCode": 0,
[2025-10-07 22:46:11]     "pilotErrorDiag": "",
[2025-10-07 22:46:11]  *** Listing of results directory ***
[2025-10-07 22:46:11] total 391108
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc    552446 Oct  7 05:46 pilot3.tar.gz
[2025-10-07 22:46:11] -rwx------ 1 boinc boinc     36292 Oct  7 05:55 runpilot2-wrapper.sh
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc      5112 Oct  7 05:55 queuedata.json
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc       100 Oct  7 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 22:46:11] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 21:30 run_atlas
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc       105 Oct  7 21:30 job.xml
[2025-10-07 22:46:11] -rw-r--r-- 2 boinc boinc 215423995 Oct  7 21:30 EVNT.46376901._004727.pool.root.1
[2025-10-07 22:46:11] -rw-r--r-- 2 boinc boinc    565598 Oct  7 21:30 input.tar.gz
[2025-10-07 22:46:11] -rw-r--r-- 2 boinc boinc     15120 Oct  7 21:30 start_atlas.sh
[2025-10-07 22:46:11] drwxrwx--x 2 boinc boinc      4096 Oct  7 21:30 shared
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc         0 Oct  7 21:30 boinc_setup_complete
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc      6446 Oct  7 21:30 init_data.xml
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc         0 Oct  7 21:30 boinc_lockfile
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc      2521 Oct  7 21:30 pandaJob.out
[2025-10-07 22:46:11] -rw------- 1 boinc boinc    979864 Oct  7 21:30 agis_schedconf.cvmfs.json
[2025-10-07 22:46:11] -rw------- 1 boinc boinc   1560401 Oct  7 21:30 agis_ddmendpoints.agis.ALL.json
[2025-10-07 22:46:11] drwx------ 4 boinc boinc      4096 Oct  7 21:31 pilot3
[2025-10-07 22:46:11] -rw------- 1 boinc boinc 179392625 Oct  7 22:45 HITS.46376905._127118.pool.root.1
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc       529 Oct  7 22:45 boinc_task_state.xml
[2025-10-07 22:46:11] -rw------- 1 boinc boinc        95 Oct  7 22:45 pilot_heartbeat.json
[2025-10-07 22:46:11] -rw------- 1 boinc boinc      1026 Oct  7 22:45 memory_monitor_summary.json
[2025-10-07 22:46:11] -rw------- 1 boinc boinc    241348 Oct  7 22:45 log.46376905._127118.job.log.tgz.1
[2025-10-07 22:46:11] -rw------- 1 boinc boinc      7753 Oct  7 22:45 heartbeat.json
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc        27 Oct  7 22:45 wrapper_checkpoint.txt
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc      8192 Oct  7 22:45 boinc_mmap_file
[2025-10-07 22:46:11] -rw------- 1 boinc boinc      4824 Oct  7 22:46 pilotlog.txt
[2025-10-07 22:46:11] -rw------- 1 boinc boinc    658876 Oct  7 22:46 log.46376905._127118.job.log.1
[2025-10-07 22:46:11] -rw------- 1 boinc boinc       357 Oct  7 22:46 output.list
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc       620 Oct  7 22:46 runtime_log
[2025-10-07 22:46:11] -rw------- 1 boinc boinc    921600 Oct  7 22:46 result.tar.gz
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc      8777 Oct  7 22:46 runtime_log.err
[2025-10-07 22:46:11] -rw------- 1 boinc boinc       658 Oct  7 22:46 LgmNDmjyDQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqwVNDmpzEnIn.diag
[2025-10-07 22:46:11] -rw-r--r-- 1 boinc boinc      7187 Oct  7 22:46 stderr.txt
[2025-10-07 22:46:11] HITS file was successfully produced:
[2025-10-07 22:46:11] -rw------- 1 boinc boinc 179392625 Oct  7 22:45 shared/HITS.pool.root.1
[2025-10-07 22:46:11]  *** Contents of shared directory: ***
[2025-10-07 22:46:11] total 387048
[2025-10-07 22:46:11] -rw-r--r-- 2 boinc boinc 215423995 Oct  7 21:30 ATLAS.root_0
[2025-10-07 22:46:11] -rw-r--r-- 2 boinc boinc    565598 Oct  7 21:30 input.tar.gz
[2025-10-07 22:46:11] -rw-r--r-- 2 boinc boinc     15120 Oct  7 21:30 start_atlas.sh
[2025-10-07 22:46:11] -rw------- 1 boinc boinc 179392625 Oct  7 22:45 HITS.pool.root.1
[2025-10-07 22:46:11] -rw------- 1 boinc boinc    921600 Oct  7 22:46 result.tar.gz
22:46:12 (1415084): run_atlas exited; CPU time 12798.314851
22:46:12 (1415084): called boinc_finish(0)

</stderr_txt>
]]>

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