Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:28:16 (3563184): wrapper (7.7.26015): starting
04:28:16 (3563184): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 04:28:16] Arguments: --nthreads 12
[2025-10-07 04:28:16] Threads: 12
[2025-10-07 04:28:16] Checking for CVMFS
[2025-10-07 04:28:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 04:28:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 04:28:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 04:28:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 04:28:17] 2.11.5.0 2671 23867 250332 151434 2 610 34873742 45568000 20759 130560 0 229894554 99.884 82673125 23036 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-07 04:28:17] CVMFS is ok
[2025-10-07 04:28:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 04:28:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 04:28:17] Further information can be found at the LHC@home message board.
[2025-10-07 04:28:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 04:28:17] Checking for apptainer binary...
[2025-10-07 04:28:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 04:28:17] Running /usr/bin/apptainer --version
[2025-10-07 04:28:17] apptainer version 1.4.1-1.el9
[2025-10-07 04:28:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 04:28:17] wns0056.triumf.lcg
[2025-10-07 04:28:17] apptainer works
[2025-10-07 04:28:17] Set ATHENA_PROC_NUMBER=12
[2025-10-07 04:28:17] Set ATHENA_CORE_NUMBER=12
[2025-10-07 04:28:17] Starting ATLAS job with PandaID=6833426104
[2025-10-07 04:28:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 04:32:48]  *** The last 200 lines of the pilot log: ***
[2025-10-07 04:32:48] 2025-10-07 11:32:16,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 04:32:48] 2025-10-07 11:32:16,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 04:32:48] 2025-10-07 11:32:16,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 04:32:48] 2025-10-07 11:32:16,057 | WARNING  | wrong length of table data, x=[1759836581.0], y=[1569.0] (must be same and length>=4)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | could have reported an average CPU frequency of 2746 MHz (4 samples)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | ..............................
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . Timing measurements:
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . get job = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . initial setup = 3 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . payload setup = 13 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . stage-in = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . payload execution = 33 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . stage-out = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . log creation = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | ..............................
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-07 04:32:48] 2025-10-07 11:32:16,059 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833426104/pilotlog.txt
[2025-10-07 04:32:48] 2025-10-07 11:32:16,087 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-07 04:32:48] - Log from pilotlog.txt -
[2025-10-07 04:32:48] 2025-10-07 11:32:16,052 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6833426104/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,053 | INFO     | extracted standard info from prmon json
[2025-10-07 04:32:48] 2025-10-07 11:32:16,053 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 04:32:48] 2025-10-07 11:32:16,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 04:32:48] 2025-10-07 11:32:16,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 04:32:48] 2025-10-07 11:32:16,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 04:32:48] 2025-10-07 11:32:16,057 | WARNING  | wrong length of table data, x=[1759836581.0], y=[1569.0] (must be same and length>=4)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | could have reported an average CPU frequency of 2746 MHz (4 samples)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | ..............................
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . Timing measurements:
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . get job = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . initial setup = 3 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . payload setup = 13 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . stage-in = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . payload execution = 33 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . stage-out = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . log creation = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | ..............................
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-07 04:32:48] 2025-10-07 11:32:16,059 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833426104/pilotlog.txt
[2025-10-07 04:32:48] 2025-10-07 11:32:16,087 | WARNING  | 
[2025-10-07 04:32:48] [begin log extracts]
[2025-10-07 04:32:48] - Log from pilotlog.txt -
[2025-10-07 04:32:48] 2025-10-07 11:32:16,052 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6833426104/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,053 | INFO     | extracted standard info from prmon json
[2025-10-07 04:32:48] 2025-10-07 11:32:16,053 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 04:32:48] 2025-10-07 11:32:16,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 04:32:48] 2025-10-07 11:32:16,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 04:32:48] 2025-10-07 11:32:16,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 04:32:48] 2025-10-07 11:32:16,057 | WARNING  | wrong length of table data, x=[1759836581.0], y=[1569.0] (must be same and length>=4)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | could have reported an average CPU frequency of 2746 MHz (4 samples)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | ..............................
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . Timing measurements:
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . get job = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . initial setup = 3 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . payload setup = 13 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . stage-in = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . payload execution = 33 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . stage-out = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | . log creation = 0 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | ..............................
[2025-10-07 04:32:48] 2025-10-07 11:32:16,058 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-07 04:32:48] 2025-10-07 11:32:16,059 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833426104/pilotlog.txt
[2025-10-07 04:32:48] [end log extracts]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,087 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,088 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-07 04:32:48] 2025-10-07 11:32:16,145 | INFO     | 
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | job summary report
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | --------------------------------------------------
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | PanDA job id: 6833426104
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | task id: 46376905
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-07 04:29:55,422 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | pilot state: failed 
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | transexitcode: 65
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | exeerrorcode: 65
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | exitcode: 65
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | cpuconsumptiontime: 17 s
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | nevents: 0
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | neventsw: 0
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | pid: 3580489
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | pgrp: 3580489
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | corecount: 12
[2025-10-07 04:32:48] 2025-10-07 11:32:16,146 | INFO     | event service: False
[2025-10-07 04:32:48] 2025-10-07 11:32:16,147 | INFO     | sizes: {0: 2347992, 1: 2348845, 2: 2348845, 12: 2348873, 16: 2349163, 23: 2349191, 51: 2372690, 52: 2372666, 53: 2377014, 184: 2377152}
[2025-10-07 04:32:48] 2025-10-07 11:32:16,147 | INFO     | --------------------------------------------------
[2025-10-07 04:32:48] 2025-10-07 11:32:16,147 | INFO     | 
[2025-10-07 04:32:48] 2025-10-07 11:32:16,147 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,186 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,187 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 04:32:48] 2025-10-07 11:32:16,187 | INFO     | job 6833426104 has completed (purged errors)
[2025-10-07 04:32:48] 2025-10-07 11:32:16,187 | INFO     | overall cleanup function is called
[2025-10-07 04:32:48] 2025-10-07 11:32:17,193 | INFO     | --- collectZombieJob: --- 10, [3580489]
[2025-10-07 04:32:48] 2025-10-07 11:32:17,193 | INFO     | zombie collector waiting for pid 3580489
[2025-10-07 04:32:48] 2025-10-07 11:32:17,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 04:32:48] 2025-10-07 11:32:17,193 | INFO     | collected zombie processes
[2025-10-07 04:32:48] 2025-10-07 11:32:17,193 | INFO     | will attempt to kill all subprocesses of pid=3580489
[2025-10-07 04:32:48] 2025-10-07 11:32:17,390 | INFO     | process IDs to be killed: [3580489] (in reverse order)
[2025-10-07 04:32:48] 2025-10-07 11:32:17,632 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 04:32:48] 2025-10-07 11:32:17,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 04:32:48] 2025-10-07 11:32:17,661 | INFO     | did not find any defunct processes belonging to 3580489
[2025-10-07 04:32:48] 2025-10-07 11:32:17,670 | INFO     | did not find any defunct processes belonging to 3580489
[2025-10-07 04:32:48] 2025-10-07 11:32:17,670 | INFO     | ready for new job
[2025-10-07 04:32:48] 2025-10-07 11:32:17,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 04:32:48] 2025-10-07 11:32:17,672 | INFO     | ***************************************
[2025-10-07 04:32:48] 2025-10-07 11:32:17,672 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 04:32:48] 2025-10-07 11:32:17,672 | INFO     | ***************************************
[2025-10-07 04:32:48] 2025-10-07 11:32:17,672 | INFO     | 
[2025-10-07 04:32:48] 2025-10-07 11:32:17,674 | INFO     | architecture information:
[2025-10-07 04:32:48] 2025-10-07 11:32:17,674 | INFO     | executing command: cat /etc/os-release
[2025-10-07 04:32:48] 2025-10-07 11:32:17,763 | INFO     | cat /etc/os-release:
[2025-10-07 04:32:48] NAME="CentOS Linux"
[2025-10-07 04:32:48] VERSION="7 (Core)"
[2025-10-07 04:32:48] ID="centos"
[2025-10-07 04:32:48] ID_LIKE="rhel fedora"
[2025-10-07 04:32:48] VERSION_ID="7"
[2025-10-07 04:32:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 04:32:48] ANSI_COLOR="0;31"
[2025-10-07 04:32:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 04:32:48] HOME_URL="https://www.centos.org/"
[2025-10-07 04:32:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 04:32:48] 
[2025-10-07 04:32:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 04:32:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 04:32:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 04:32:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 04:32:48] 
[2025-10-07 04:32:48] 2025-10-07 11:32:17,763 | INFO     | ***************************************
[2025-10-07 04:32:48] 2025-10-07 11:32:18,267 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-07 04:32:48] 2025-10-07 11:32:18,401 | INFO     | sufficient remaining disk space (2070491955200 B)
[2025-10-07 04:32:48] 2025-10-07 11:32:18,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 04:32:48] 2025-10-07 11:32:18,401 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 04:32:48] 2025-10-07 11:32:18,402 | INFO     | update_server=False
[2025-10-07 04:32:48] 2025-10-07 11:32:18,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 04:32:48] 2025-10-07 11:32:18,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 04:32:48] 2025-10-07 11:32:18,402 | INFO     | aborting loop
[2025-10-07 04:32:48] 2025-10-07 11:32:18,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 04:32:48] 2025-10-07 11:32:18,600 | INFO     | all data control threads have been joined
[2025-10-07 04:32:48] 2025-10-07 11:32:19,196 | INFO     | all payload control threads have been joined
[2025-10-07 04:32:48] 2025-10-07 11:32:19,408 | INFO     | [job] retrieve thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:19,408 | INFO     | [payload] validate_post thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:19,408 | INFO     | [job] job monitor thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:19,437 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:19,607 | INFO     | [data] control thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:19,733 | INFO     | all job control threads have been joined
[2025-10-07 04:32:48] 2025-10-07 11:32:19,863 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:20,167 | INFO     | [job] validate thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:20,205 | INFO     | [payload] control thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:20,240 | INFO     | [payload] failed_post thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:20,348 | INFO     | [data] copytool_in thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:20,350 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:20,409 | INFO     | [data] copytool_out thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:20,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:20,739 | INFO     | [job] control thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:21,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 04:32:48] 2025-10-07 11:32:21,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 04:32:48] 2025-10-07 11:32:22,165 | INFO     | [job] queue monitor thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:25,765 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 04:32:48] 2025-10-07 11:32:36,804 | INFO     | [monitor] cgroup control has ended
[2025-10-07 04:32:48] 2025-10-07 11:32:37,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279109191488)>', '<ExcThread(monitor, started 140278044284672)>']
[2025-10-07 04:32:48] 2025-10-07 11:32:42,828 | INFO     | all workflow threads have been joined
[2025-10-07 04:32:48] 2025-10-07 11:32:42,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 04:32:48] 2025-10-07 11:32:42,829 | INFO     | traces error code: 0
[2025-10-07 04:32:48] 2025-10-07 11:32:42,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 04:32:48] 2025-10-07 11:32:48,116 | INFO     | PID=3566925 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 04:32:48] 2025-10-07 11:32:48,117 | INFO     | .. there are 35 such processes running
[2025-10-07 04:32:48] 2025-10-07 11:32:48,117 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 04:32:48] 2025-10-07 11:32:48,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 04:32:48] 2025-10-07 11:32:48,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 04:32:48] 2025-10-07 11:32:48,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 04:32:48] 2025-10-07 11:32:48,117 | INFO     | [monitor] control thread has ended
[2025-10-07 04:32:48] 2025-10-07 11:32:48,258 [wrapper] ==== pilot stdout END ====
[2025-10-07 04:32:48] 2025-10-07 11:32:48,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 04:32:48] 2025-10-07 11:32:48,262 [wrapper] pilotpid: 3566925
[2025-10-07 04:32:48] 2025-10-07 11:32:48,266 [wrapper] Pilot exit status: 0
[2025-10-07 04:32:48] 2025-10-07 11:32:48,285 [wrapper] pandaids: 6833426104
[2025-10-07 04:32:48] 2025-10-07 11:32:48,360 [wrapper] cleanup supervisor_pilot 3566931 3566926
[2025-10-07 04:32:48] 2025-10-07 11:32:48,385 [wrapper] Test setup, not cleaning
[2025-10-07 04:32:48] 2025-10-07 11:32:48,427 [wrapper] apfmon messages muted
[2025-10-07 04:32:48] 2025-10-07 11:32:48,476 [wrapper] ==== wrapper stdout END ====
[2025-10-07 04:32:48] 2025-10-07 11:32:48,489 [wrapper] ==== wrapper stderr END ====
[2025-10-07 04:32:48]  *** Error codes and diagnostics ***
[2025-10-07 04:32:48]     "exeErrorCode": 65,
[2025-10-07 04:32:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-07 04:32:48]     "pilotErrorCode": 1305,
[2025-10-07 04:32:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-07 04:32:48]  *** Listing of results directory ***
[2025-10-07 04:32:48] total 211676
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc    552446 Oct  7 01:57 pilot3.tar.gz
[2025-10-07 04:32:48] -rwx------. 1 boinc boinc     36292 Oct  7 02:01 runpilot2-wrapper.sh
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc      5112 Oct  7 02:01 queuedata.json
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc       100 Oct  7 04:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 04:32:48] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 04:28 run_atlas
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc       105 Oct  7 04:28 job.xml
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc      6593 Oct  7 04:28 init_data.xml
[2025-10-07 04:32:48] -rw-r--r--. 2 boinc boinc 212650012 Oct  7 04:28 EVNT.46376901._004898.pool.root.1
[2025-10-07 04:32:48] -rw-r--r--. 2 boinc boinc     15120 Oct  7 04:28 start_atlas.sh
[2025-10-07 04:32:48] drwxrwx--x. 2 boinc boinc      4096 Oct  7 04:28 shared
[2025-10-07 04:32:48] -rw-r--r--. 2 boinc boinc    565600 Oct  7 04:28 input.tar.gz
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc         0 Oct  7 04:28 boinc_lockfile
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc      2521 Oct  7 04:28 pandaJob.out
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc    975010 Oct  7 04:28 agis_schedconf.cvmfs.json
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc   1560401 Oct  7 04:28 agis_ddmendpoints.agis.ALL.json
[2025-10-07 04:32:48] drwx------. 4 boinc boinc      4096 Oct  7 04:28 pilot3
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc       953 Oct  7 04:29 memory_monitor_summary.json
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc     21890 Oct  7 04:30 log.46376905._131607.job.log.tgz.1
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc      8397 Oct  7 04:32 heartbeat.json
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc      8192 Oct  7 04:32 boinc_mmap_file
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc        22 Oct  7 04:32 wrapper_checkpoint.txt
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc       523 Oct  7 04:32 boinc_task_state.xml
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc        95 Oct  7 04:32 pilot_heartbeat.json
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc       823 Oct  7 04:32 pilotlog.txt
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc     89545 Oct  7 04:32 log.46376905._131607.job.log.1
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc       188 Oct  7 04:32 output.list
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc       620 Oct  7 04:32 runtime_log
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc    133120 Oct  7 04:32 result.tar.gz
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc      8528 Oct  7 04:32 runtime_log.err
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc       644 Oct  7 04:32 002MDmGkIQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaOLMDmNLyKLn.diag
[2025-10-07 04:32:48] -rw-r--r--. 1 boinc boinc     21814 Oct  7 04:32 stderr.txt
[2025-10-07 04:32:48] No HITS result produced
[2025-10-07 04:32:48]  *** Contents of shared directory: ***
[2025-10-07 04:32:48] total 208372
[2025-10-07 04:32:48] -rw-r--r--. 2 boinc boinc 212650012 Oct  7 04:28 ATLAS.root_0
[2025-10-07 04:32:48] -rw-r--r--. 2 boinc boinc     15120 Oct  7 04:28 start_atlas.sh
[2025-10-07 04:32:48] -rw-r--r--. 2 boinc boinc    565600 Oct  7 04:28 input.tar.gz
[2025-10-07 04:32:48] -rw-------. 1 boinc boinc    133120 Oct  7 04:32 result.tar.gz
04:32:50 (3563184): run_atlas exited; CPU time 25.872852
04:32:50 (3563184): called boinc_finish(0)

</stderr_txt>
]]>

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