Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:14:09 (4189053): wrapper (7.7.26015): starting
07:14:09 (4189053): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 07:14:09] Arguments: --nthreads 12
[2025-10-08 07:14:09] Threads: 12
[2025-10-08 07:14:09] Checking for CVMFS
[2025-10-08 07:14:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 07:14:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 07:14:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 07:14:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 07:14:13] 2.13.2.0 4189286 0 29652 151472 3 1 3883323 6144000 0 130560 0 0 0.000 1292 746 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-08 07:14:13] CVMFS is ok
[2025-10-08 07:14:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 07:14:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-08 07:14:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-08 07:14:13] Further information can be found at the LHC@home message board.
[2025-10-08 07:14:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 07:14:13] Checking for apptainer binary...
[2025-10-08 07:14:13] apptainer is not installed, using version from CVMFS
[2025-10-08 07:14:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 07:14:13] ace
[2025-10-08 07:14:13] apptainer works
[2025-10-08 07:14:13] Set ATHENA_PROC_NUMBER=12
[2025-10-08 07:14:13] Set ATHENA_CORE_NUMBER=12
[2025-10-08 07:14:13] Starting ATLAS job with PandaID=6832634959
[2025-10-08 07:14:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 08:15:40]  *** The last 200 lines of the pilot log: ***
[2025-10-08 08:15:40] 2025-10-08 13:14:26,403 | INFO     | adding to output.list: log.46376905._110096.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/e3/log.46376905._110096.job.log.tg
[2025-10-08 08:15:40] 2025-10-08 13:14:26,403 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 08:15:40] 2025-10-08 13:14:26,403 | INFO     | summary of transferred files:
[2025-10-08 08:15:40] 2025-10-08 13:14:26,403 | INFO     |  -- lfn=log.46376905._110096.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 08:15:40] 2025-10-08 13:14:26,404 | INFO     | stage-out finished correctly
[2025-10-08 08:15:40] 2025-10-08 13:14:28,095 | INFO     | time since job start (3599s) is within the limit (172800.0s)
[2025-10-08 08:15:40] 2025-10-08 13:14:28,671 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 08:15:40] 2025-10-08 13:14:28,751 | WARNING  | process 6185 can no longer be monitored (due to stat problems) - aborting
[2025-10-08 08:15:40] 2025-10-08 13:14:28,751 | INFO     | using path: /var/lib/boinc-client/slots/16/PanDA_Pilot-6832634959/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 08:15:40] 2025-10-08 13:14:28,823 | INFO     | number of running child processes to parent process 6185: 1
[2025-10-08 08:15:40] 2025-10-08 13:14:28,823 | INFO     | maximum number of monitored processes: 6
[2025-10-08 08:15:40] 2025-10-08 13:14:30,101 | INFO     | time since job start (3601s) is within the limit (172800.0s)
[2025-10-08 08:15:40] 2025-10-08 13:14:31,197 | INFO     | PID=4193479 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 08:15:40] 2025-10-08 13:14:31,326 | INFO     | monitor loop #273: job 0:6832634959 is in state 'finished'
[2025-10-08 08:15:40] 2025-10-08 13:14:31,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 08:15:40] 2025-10-08 13:14:31,496 | INFO     | job 6832634959 has state=finished
[2025-10-08 08:15:40] 2025-10-08 13:14:31,496 | INFO     | preparing for final server update for job 6832634959 in state='finished'
[2025-10-08 08:15:40] 2025-10-08 13:14:32,072 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-08 08:15:40] 2025-10-08 13:14:32,072 | INFO     | this job has now completed (state=finished)
[2025-10-08 08:15:40] 2025-10-08 13:14:32,072 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 08:15:40] 2025-10-08 13:14:32,072 | INFO     | log transfer has been attempted: DONE
[2025-10-08 08:15:40] 2025-10-08 13:14:32,072 | INFO     | job 6832634959 has finished - writing final server update
[2025-10-08 08:15:40] 2025-10-08 13:14:32,072 | INFO     | total number of processed events: 400 (read)
[2025-10-08 08:15:40] 2025-10-08 13:14:32,075 | INFO     | executing command: lscpu
[2025-10-08 08:15:40] 2025-10-08 13:14:32,092 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 08:15:40] 2025-10-08 13:14:32,198 | INFO     | time since job start (3603s) is within the limit (172800.0s)
[2025-10-08 08:15:40] 2025-10-08 13:14:33,830 | INFO     | monitor loop #274: job 0:6832634959 is in state 'finished'
[2025-10-08 08:15:40] 2025-10-08 13:14:33,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 08:15:40] 2025-10-08 13:14:34,204 | INFO     | time since job start (3605s) is within the limit (172800.0s)
[2025-10-08 08:15:40] 2025-10-08 13:14:36,206 | INFO     | time since job start (3607s) is within the limit (172800.0s)
[2025-10-08 08:15:40] 2025-10-08 13:14:36,330 | INFO     | monitor loop #275: job 0:6832634959 is in state 'finished'
[2025-10-08 08:15:40] 2025-10-08 13:14:36,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 08:15:40] 2025-10-08 13:14:38,210 | INFO     | time since job start (3609s) is within the limit (172800.0s)
[2025-10-08 08:15:40] 2025-10-08 13:14:38,833 | INFO     | monitor loop #276: job 0:6832634959 is in state 'finished'
[2025-10-08 08:15:40] 2025-10-08 13:14:38,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 08:15:40] 2025-10-08 13:14:39,457 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 08:15:40] 2025-10-08 13:14:39,459 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2250.291
[2025-10-08 08:15:40] 2025-10-08 13:14:39,461 | INFO     | using path: /var/lib/boinc-client/slots/16/PanDA_Pilot-6832634959/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 08:15:40] 2025-10-08 13:14:39,461 | INFO     | extracted standard info from prmon json
[2025-10-08 08:15:40] 2025-10-08 13:14:39,461 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 08:15:40] 2025-10-08 13:14:39,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 08:15:40] 2025-10-08 13:14:39,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 08:15:40] 2025-10-08 13:14:39,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 08:15:40] 2025-10-08 13:14:39,462 | INFO     | fitting pss+swap vs Time
[2025-10-08 08:15:40] 2025-10-08 13:14:39,462 | INFO     | sum of square deviations: 43584073.0
[2025-10-08 08:15:40] 2025-10-08 13:14:39,462 | INFO     | sum of deviations: 617526302.0
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | mean x: 1759927549.5
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | mean y: 3129236.576923077
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | -- intersect: -24932620835.02967
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | intersect: -24932620835.02967
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | chi2: 0.00043391401032267683
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | -- intersect: -24932620835.02967
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | current memory leak: 14.17 B/s (using 52 data points, chi2=0.00)
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | could have reported an average CPU frequency of 2550 MHz (5 samples)
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | ..............................
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | . Timing measurements:
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | . get job = 0 s
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | . initial setup = 3 s
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | . payload setup = 3 s
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | . stage-in = 0 s
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | . payload execution = 3575 s
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | . stage-out = 0 s
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | . log creation = 0 s
[2025-10-08 08:15:40] 2025-10-08 13:14:39,463 | INFO     | ..............................
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | 
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | job summary report
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | --------------------------------------------------
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | PanDA job id: 6832634959
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | task id: 46376905
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | errors: (none)
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | pilot state: finished 
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | transexitcode: 0
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | exeerrorcode: 0
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | exeerrordiag: 
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | exitcode: 0
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | exitmsg: OK
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | cpuconsumptiontime: 39877 s
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | nevents: 400
[2025-10-08 08:15:40] 2025-10-08 13:14:39,510 | INFO     | neventsw: 0
[2025-10-08 08:15:40] 2025-10-08 13:14:39,511 | INFO     | pid: 6185
[2025-10-08 08:15:40] 2025-10-08 13:14:39,511 | INFO     | pgrp: 6185
[2025-10-08 08:15:40] 2025-10-08 13:14:39,511 | INFO     | corecount: 12
[2025-10-08 08:15:40] 2025-10-08 13:14:39,511 | INFO     | event service: False
[2025-10-08 08:15:40] 2025-10-08 13:14:39,511 | INFO     | sizes: {0: 2348777, 1: 2348777, 3: 2349067, 11: 2349095, 3583: 2374845, 3584: 2383859, 3587: 2384043, 3597: 2384269}
[2025-10-08 08:15:40] 2025-10-08 13:14:39,511 | INFO     | --------------------------------------------------
[2025-10-08 08:15:40] 2025-10-08 13:14:39,511 | INFO     | 
[2025-10-08 08:15:40] 2025-10-08 13:14:39,511 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/16
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,526 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 08:15:40] 2025-10-08 13:14:39,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,527 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 08:15:40] 2025-10-08 13:14:39,527 | INFO     | job 6832634959 has completed (purged errors)
[2025-10-08 08:15:40] 2025-10-08 13:14:39,527 | INFO     | overall cleanup function is called
[2025-10-08 08:15:40] 2025-10-08 13:14:40,534 | INFO     | --- collectZombieJob: --- 10, [6185]
[2025-10-08 08:15:40] 2025-10-08 13:14:40,534 | INFO     | zombie collector waiting for pid 6185
[2025-10-08 08:15:40] 2025-10-08 13:14:40,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 08:15:40] 2025-10-08 13:14:40,534 | INFO     | collected zombie processes
[2025-10-08 08:15:40] 2025-10-08 13:14:40,534 | INFO     | will attempt to kill all subprocesses of pid=6185
[2025-10-08 08:15:40] 2025-10-08 13:14:40,611 | INFO     | process IDs to be killed: [6185] (in reverse order)
[2025-10-08 08:15:40] 2025-10-08 13:14:40,647 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 08:15:40] 2025-10-08 13:14:40,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 08:15:40] 2025-10-08 13:14:40,650 | INFO     | did not find any defunct processes belonging to 6185
[2025-10-08 08:15:40] 2025-10-08 13:14:40,652 | INFO     | did not find any defunct processes belonging to 6185
[2025-10-08 08:15:40] 2025-10-08 13:14:40,653 | INFO     | ready for new job
[2025-10-08 08:15:40] 2025-10-08 13:14:40,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 08:15:40] 2025-10-08 13:14:40,654 | INFO     | ***************************************
[2025-10-08 08:15:40] 2025-10-08 13:14:40,654 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 08:15:40] 2025-10-08 13:14:40,654 | INFO     | ***************************************
[2025-10-08 08:15:40] 2025-10-08 13:14:40,654 | INFO     | 
[2025-10-08 08:15:40] 2025-10-08 13:14:40,655 | INFO     | architecture information:
[2025-10-08 08:15:40] 2025-10-08 13:14:40,655 | INFO     | executing command: cat /etc/os-release
[2025-10-08 08:15:40] 2025-10-08 13:14:40,665 | INFO     | cat /etc/os-release:
[2025-10-08 08:15:40] NAME="CentOS Linux"
[2025-10-08 08:15:40] VERSION="7 (Core)"
[2025-10-08 08:15:40] ID="centos"
[2025-10-08 08:15:40] ID_LIKE="rhel fedora"
[2025-10-08 08:15:40] VERSION_ID="7"
[2025-10-08 08:15:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 08:15:40] ANSI_COLOR="0;31"
[2025-10-08 08:15:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 08:15:40] HOME_URL="https://www.centos.org/"
[2025-10-08 08:15:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 08:15:40] 
[2025-10-08 08:15:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 08:15:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 08:15:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 08:15:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 08:15:40] 
[2025-10-08 08:15:40] 2025-10-08 13:14:40,665 | INFO     | ***************************************
[2025-10-08 08:15:40] 2025-10-08 13:14:41,166 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/16
[2025-10-08 08:15:40] 2025-10-08 13:14:41,179 | INFO     | sufficient remaining disk space (22589472768 B)
[2025-10-08 08:15:40] 2025-10-08 13:14:41,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 08:15:40] 2025-10-08 13:14:41,179 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 08:15:40] 2025-10-08 13:14:41,179 | INFO     | update_server=False
[2025-10-08 08:15:40] 2025-10-08 13:14:41,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 08:15:40] 2025-10-08 13:14:41,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 08:15:40] 2025-10-08 13:14:41,337 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 08:15:40] 2025-10-08 13:14:41,337 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 08:15:40] 2025-10-08 13:14:41,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 08:15:40] 2025-10-08 13:14:41,337 | INFO     | will abort loop
[2025-10-08 08:15:40] 2025-10-08 13:14:41,873 | INFO     | all job control threads have been joined
[2025-10-08 08:15:40] 2025-10-08 13:14:41,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 08:15:40] 2025-10-08 13:14:42,048 | INFO     | all data control threads have been joined
[2025-10-08 08:15:40] 2025-10-08 13:14:42,184 | INFO     | [job] retrieve thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:42,185 | INFO     | [job] queue monitor thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:42,198 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:42,342 | INFO     | [job] job monitor thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:42,434 | INFO     | all payload control threads have been joined
[2025-10-08 08:15:40] 2025-10-08 13:14:42,754 | INFO     | [data] copytool_in thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:42,879 | INFO     | [job] control thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:42,966 | INFO     | [job] validate thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:43,054 | INFO     | [data] control thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:43,117 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:43,117 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:43,226 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:43,315 | INFO     | [payload] validate_post thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:43,440 | INFO     | [payload] control thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:43,721 | INFO     | [payload] failed_post thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:43,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 08:15:40] 2025-10-08 13:14:43,966 | INFO     | [data] copytool_out thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:14:47,730 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 08:15:40] 2025-10-08 13:15:11,385 | INFO     | PID=4193479 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 08:15:40] 2025-10-08 13:15:11,385 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 08:15:40] 2025-10-08 13:15:11,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 08:15:40] 2025-10-08 13:15:11,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 08:15:40] 2025-10-08 13:15:34,526 | INFO     | [monitor] cgroup control has ended
[2025-10-08 08:15:40] 2025-10-08 13:15:35,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891257247552)>', '<ExcThread(monitor, started 139890356377344)>']
[2025-10-08 08:15:40] 2025-10-08 13:15:36,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 08:15:40] 2025-10-08 13:15:36,457 | INFO     | [monitor] control thread has ended
[2025-10-08 08:15:40] 2025-10-08 13:15:40,500 | INFO     | all workflow threads have been joined
[2025-10-08 08:15:40] 2025-10-08 13:15:40,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 08:15:40] 2025-10-08 13:15:40,501 | INFO     | traces error code: 0
[2025-10-08 08:15:40] 2025-10-08 13:15:40,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 08:15:40] 2025-10-08 13:15:40,630 [wrapper] ==== pilot stdout END ====
[2025-10-08 08:15:40] 2025-10-08 13:15:40,633 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 08:15:40] 2025-10-08 13:15:40,635 [wrapper] pilotpid: 4193479
[2025-10-08 08:15:40] 2025-10-08 13:15:40,637 [wrapper] Pilot exit status: 0
[2025-10-08 08:15:40] 2025-10-08 13:15:40,646 [wrapper] pandaids: 6832634959
[2025-10-08 08:15:40] 2025-10-08 13:15:40,671 [wrapper] cleanup supervisor_pilot   26215 4193480
[2025-10-08 08:15:40] 2025-10-08 13:15:40,673 [wrapper] Test setup, not cleaning
[2025-10-08 08:15:40] 2025-10-08 13:15:40,675 [wrapper] apfmon messages muted
[2025-10-08 08:15:40] 2025-10-08 13:15:40,677 [wrapper] ==== wrapper stdout END ====
[2025-10-08 08:15:40] 2025-10-08 13:15:40,679 [wrapper] ==== wrapper stderr END ====
[2025-10-08 08:15:40]  *** Error codes and diagnostics ***
[2025-10-08 08:15:40]     "exeErrorCode": 0,
[2025-10-08 08:15:40]     "exeErrorDiag": "",
[2025-10-08 08:15:40]     "pilotErrorCode": 0,
[2025-10-08 08:15:40]     "pilotErrorDiag": "",
[2025-10-08 08:15:40]  *** Listing of results directory ***
[2025-10-08 08:15:40] total 387492
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc    552446 Oct  6 05:49 pilot3.tar.gz
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc      5112 Oct  6 06:01 queuedata.json
[2025-10-08 08:15:40] -rwx------ 1 boinc boinc     36292 Oct  6 06:01 runpilot2-wrapper.sh
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc       100 Oct  8 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 08:15:40] -rwxr-xr-x 1 boinc boinc      7986 Oct  8 07:14 run_atlas
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc       105 Oct  8 07:14 job.xml
[2025-10-08 08:15:40] -rw-r--r-- 2 boinc boinc 213878205 Oct  8 07:14 EVNT.46376901._004081.pool.root.1
[2025-10-08 08:15:40] -rw-r--r-- 2 boinc boinc     15120 Oct  8 07:14 start_atlas.sh
[2025-10-08 08:15:40] drwxrwx--x 2 boinc boinc      4096 Oct  8 07:14 shared
[2025-10-08 08:15:40] -rw-r--r-- 2 boinc boinc    565601 Oct  8 07:14 input.tar.gz
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc      6989 Oct  8 07:14 init_data.xml
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc         0 Oct  8 07:14 boinc_lockfile
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc      2520 Oct  8 07:14 pandaJob.out
[2025-10-08 08:15:40] -rw------- 1 boinc boinc    979337 Oct  8 07:14 agis_schedconf.cvmfs.json
[2025-10-08 08:15:40] -rw------- 1 boinc boinc   1560401 Oct  8 07:14 agis_ddmendpoints.agis.ALL.json
[2025-10-08 08:15:40] drwx------ 4 boinc boinc      4096 Oct  8 07:14 pilot3
[2025-10-08 08:15:40] -rw------- 1 boinc boinc 177190728 Oct  8 08:14 HITS.46376905._110096.pool.root.1
[2025-10-08 08:15:40] -rw------- 1 boinc boinc      1017 Oct  8 08:14 memory_monitor_summary.json
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc       529 Oct  8 08:14 boinc_task_state.xml
[2025-10-08 08:15:40] -rw------- 1 boinc boinc    376351 Oct  8 08:14 log.46376905._110096.job.log.tgz.1
[2025-10-08 08:15:40] -rw------- 1 boinc boinc      7754 Oct  8 08:14 heartbeat.json
[2025-10-08 08:15:40] -rw------- 1 boinc boinc        95 Oct  8 08:15 pilot_heartbeat.json
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc      8192 Oct  8 08:15 boinc_mmap_file
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc        27 Oct  8 08:15 wrapper_checkpoint.txt
[2025-10-08 08:15:40] -rw------- 1 boinc boinc      4942 Oct  8 08:15 pilotlog.txt
[2025-10-08 08:15:40] -rw------- 1 boinc boinc    537631 Oct  8 08:15 log.46376905._110096.job.log.1
[2025-10-08 08:15:40] -rw------- 1 boinc boinc       357 Oct  8 08:15 output.list
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc       620 Oct  8 08:15 runtime_log
[2025-10-08 08:15:40] -rw------- 1 boinc boinc    931840 Oct  8 08:15 result.tar.gz
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc      8754 Oct  8 08:15 runtime_log.err
[2025-10-08 08:15:40] -rw------- 1 boinc boinc       638 Oct  8 08:15 8fSKDmn9xP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmi4IMDmvQOGAo.diag
[2025-10-08 08:15:40] -rw-r--r-- 1 boinc boinc     22467 Oct  8 08:15 stderr.txt
[2025-10-08 08:15:40] HITS file was successfully produced:
[2025-10-08 08:15:40] -rw------- 1 boinc boinc 177190728 Oct  8 08:14 shared/HITS.pool.root.1
[2025-10-08 08:15:40]  *** Contents of shared directory: ***
[2025-10-08 08:15:40] total 383400
[2025-10-08 08:15:40] -rw-r--r-- 2 boinc boinc 213878205 Oct  8 07:14 ATLAS.root_0
[2025-10-08 08:15:40] -rw-r--r-- 2 boinc boinc     15120 Oct  8 07:14 start_atlas.sh
[2025-10-08 08:15:40] -rw-r--r-- 2 boinc boinc    565601 Oct  8 07:14 input.tar.gz
[2025-10-08 08:15:40] -rw------- 1 boinc boinc 177190728 Oct  8 08:14 HITS.pool.root.1
[2025-10-08 08:15:40] -rw------- 1 boinc boinc    931840 Oct  8 08:15 result.tar.gz
08:15:42 (4189053): run_atlas exited; CPU time 39925.968095
08:15:42 (4189053): called boinc_finish(0)

</stderr_txt>
]]>

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