Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:18:16 (756438): wrapper (7.7.26015): starting
04:18:16 (756438): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 04:18:16] Arguments: --nthreads 12
[2025-10-07 04:18:16] Threads: 12
[2025-10-07 04:18:16] Checking for CVMFS
[2025-10-07 04:18:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 04:18:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 04:18:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 04:18:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 04:18:17] 2.11.5.0 2632 24225 226012 151434 2 571 31867086 45568001 23745 130560 0 235452831 99.872 99849632 23268 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-07 04:18:17] CVMFS is ok
[2025-10-07 04:18:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 04:18:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 04:18:17] Further information can be found at the LHC@home message board.
[2025-10-07 04:18:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 04:18:17] Checking for apptainer binary...
[2025-10-07 04:18:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 04:18:17] Running /usr/bin/apptainer --version
[2025-10-07 04:18:17] apptainer version 1.4.1-1.el9
[2025-10-07 04:18:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 04:18:18] wns0057.triumf.lcg
[2025-10-07 04:18:18] apptainer works
[2025-10-07 04:18:18] Set ATHENA_PROC_NUMBER=12
[2025-10-07 04:18:18] Set ATHENA_CORE_NUMBER=12
[2025-10-07 04:18:18] Starting ATLAS job with PandaID=6833425959
[2025-10-07 04:18:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 04:22:54]  *** The last 200 lines of the pilot log: ***
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | WARNING  | wrong length of table data, x=[1759835986.0], y=[1832.0] (must be same and length>=4)
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | could have reported an average CPU frequency of 2766 MHz (4 samples)
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | ..............................
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . Timing measurements:
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . get job = 0 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . initial setup = 3 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . payload setup = 15 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . stage-in = 0 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . payload execution = 30 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . stage-out = 1 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . log creation = 0 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,880 | INFO     | ..............................
[2025-10-07 04:22:54] 2025-10-07 11:22:20,880 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-07 04:22:54] 2025-10-07 11:22:20,880 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833425959/pilotlog.txt
[2025-10-07 04:22:54] 2025-10-07 11:22:20,895 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-07 04:22:54] - Log from pilotlog.txt -
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6833425959/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | INFO     | extracted standard info from prmon json
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | WARNING  | wrong length of table data, x=[1759835986.0], y=[1832.0] (must be same and length>=4)
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | could have reported an average CPU frequency of 2766 MHz (4 samples)
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | ..............................
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . Timing measurements:
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . get job = 0 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . initial setup = 3 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . payload setup = 15 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . stage-in = 0 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . payload execution = 30 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . stage-out = 1 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . log creation = 0 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,880 | INFO     | ..............................
[2025-10-07 04:22:54] 2025-10-07 11:22:20,880 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-07 04:22:54] 2025-10-07 11:22:20,880 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833425959/pilotlog.txt
[2025-10-07 04:22:54] 2025-10-07 11:22:20,895 | WARNING  | 
[2025-10-07 04:22:54] [begin log extracts]
[2025-10-07 04:22:54] - Log from pilotlog.txt -
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6833425959/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | INFO     | extracted standard info from prmon json
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 04:22:54] 2025-10-07 11:22:20,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | WARNING  | wrong length of table data, x=[1759835986.0], y=[1832.0] (must be same and length>=4)
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | could have reported an average CPU frequency of 2766 MHz (4 samples)
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | ..............................
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . Timing measurements:
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . get job = 0 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . initial setup = 3 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . payload setup = 15 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . stage-in = 0 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . payload execution = 30 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . stage-out = 1 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,879 | INFO     | . log creation = 0 s
[2025-10-07 04:22:54] 2025-10-07 11:22:20,880 | INFO     | ..............................
[2025-10-07 04:22:54] 2025-10-07 11:22:20,880 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-07 04:22:54] 2025-10-07 11:22:20,880 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833425959/pilotlog.txt
[2025-10-07 04:22:54] [end log extracts]
[2025-10-07 04:22:54] 2025-10-07 11:22:20,895 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-07 04:22:54] 2025-10-07 11:22:20,896 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-07 04:22:54] 2025-10-07 11:22:21,015 | INFO     | 
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | job summary report
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | --------------------------------------------------
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | PanDA job id: 6833425959
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | task id: 46376905
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-07 04:20:00,436 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | pilot state: failed 
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | transexitcode: 65
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | exeerrorcode: 65
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | exitcode: 65
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | cpuconsumptiontime: 17 s
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | nevents: 0
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | neventsw: 0
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | pid: 786287
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | pgrp: 786287
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | corecount: 12
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | event service: False
[2025-10-07 04:22:54] 2025-10-07 11:22:21,016 | INFO     | sizes: {0: 2348816, 11: 2349106, 21: 2349106, 50: 2372364, 51: 2376656, 53: 2376684, 180: 2376978}
[2025-10-07 04:22:54] 2025-10-07 11:22:21,017 | INFO     | --------------------------------------------------
[2025-10-07 04:22:54] 2025-10-07 11:22:21,017 | INFO     | 
[2025-10-07 04:22:54] 2025-10-07 11:22:21,017 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-07 04:22:54] 2025-10-07 11:22:21,109 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,109 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,109 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,109 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | job 6833425959 has completed (purged errors)
[2025-10-07 04:22:54] 2025-10-07 11:22:21,110 | INFO     | overall cleanup function is called
[2025-10-07 04:22:54] 2025-10-07 11:22:22,118 | INFO     | --- collectZombieJob: --- 10, [786287]
[2025-10-07 04:22:54] 2025-10-07 11:22:22,119 | INFO     | zombie collector waiting for pid 786287
[2025-10-07 04:22:54] 2025-10-07 11:22:22,119 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 04:22:54] 2025-10-07 11:22:22,119 | INFO     | collected zombie processes
[2025-10-07 04:22:54] 2025-10-07 11:22:22,119 | INFO     | will attempt to kill all subprocesses of pid=786287
[2025-10-07 04:22:54] 2025-10-07 11:22:22,386 | INFO     | process IDs to be killed: [786287] (in reverse order)
[2025-10-07 04:22:54] 2025-10-07 11:22:22,467 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 04:22:54] 2025-10-07 11:22:22,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 04:22:54] 2025-10-07 11:22:22,478 | INFO     | did not find any defunct processes belonging to 786287
[2025-10-07 04:22:54] 2025-10-07 11:22:22,487 | INFO     | did not find any defunct processes belonging to 786287
[2025-10-07 04:22:54] 2025-10-07 11:22:22,488 | INFO     | ready for new job
[2025-10-07 04:22:54] 2025-10-07 11:22:22,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 04:22:54] 2025-10-07 11:22:22,489 | INFO     | ***************************************
[2025-10-07 04:22:54] 2025-10-07 11:22:22,489 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 04:22:54] 2025-10-07 11:22:22,489 | INFO     | ***************************************
[2025-10-07 04:22:54] 2025-10-07 11:22:22,489 | INFO     | 
[2025-10-07 04:22:54] 2025-10-07 11:22:22,491 | INFO     | architecture information:
[2025-10-07 04:22:54] 2025-10-07 11:22:22,491 | INFO     | executing command: cat /etc/os-release
[2025-10-07 04:22:54] 2025-10-07 11:22:22,503 | INFO     | cat /etc/os-release:
[2025-10-07 04:22:54] NAME="CentOS Linux"
[2025-10-07 04:22:54] VERSION="7 (Core)"
[2025-10-07 04:22:54] ID="centos"
[2025-10-07 04:22:54] ID_LIKE="rhel fedora"
[2025-10-07 04:22:54] VERSION_ID="7"
[2025-10-07 04:22:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 04:22:54] ANSI_COLOR="0;31"
[2025-10-07 04:22:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 04:22:54] HOME_URL="https://www.centos.org/"
[2025-10-07 04:22:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 04:22:54] 
[2025-10-07 04:22:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 04:22:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 04:22:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 04:22:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 04:22:54] 
[2025-10-07 04:22:54] 2025-10-07 11:22:22,504 | INFO     | ***************************************
[2025-10-07 04:22:54] 2025-10-07 11:22:23,007 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-07 04:22:54] 2025-10-07 11:22:23,174 | INFO     | sufficient remaining disk space (2002425741312 B)
[2025-10-07 04:22:54] 2025-10-07 11:22:23,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 04:22:54] 2025-10-07 11:22:23,174 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 04:22:54] 2025-10-07 11:22:23,174 | INFO     | update_server=False
[2025-10-07 04:22:54] 2025-10-07 11:22:23,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 04:22:54] 2025-10-07 11:22:23,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 04:22:54] 2025-10-07 11:22:23,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 04:22:54] 2025-10-07 11:22:23,225 | INFO     | all payload control threads have been joined
[2025-10-07 04:22:54] 2025-10-07 11:22:23,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 04:22:54] 2025-10-07 11:22:23,538 | INFO     | aborting loop
[2025-10-07 04:22:54] 2025-10-07 11:22:23,708 | INFO     | all data control threads have been joined
[2025-10-07 04:22:54] 2025-10-07 11:22:24,072 | INFO     | all job control threads have been joined
[2025-10-07 04:22:54] 2025-10-07 11:22:24,180 | INFO     | [job] retrieve thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:24,232 | INFO     | [payload] control thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:24,332 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:24,544 | INFO     | [job] job monitor thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:24,672 | INFO     | [job] validate thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:24,714 | INFO     | [data] control thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:24,842 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:25,081 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:25,082 | INFO     | [job] control thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:25,102 | INFO     | [data] copytool_in thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:25,181 | INFO     | [data] copytool_out thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:25,593 | INFO     | [payload] failed_post thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:25,695 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:25,762 | INFO     | [payload] validate_post thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:26,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 04:22:54] 2025-10-07 11:22:27,037 | INFO     | [job] queue monitor thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:27,183 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 04:22:54] 2025-10-07 11:22:46,351 | INFO     | [monitor] cgroup control has ended
[2025-10-07 04:22:54] 2025-10-07 11:22:46,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019205400384)>', '<ExcThread(monitor, started 140018282657536)>']
[2025-10-07 04:22:54] 2025-10-07 11:22:51,839 | INFO     | all workflow threads have been joined
[2025-10-07 04:22:54] 2025-10-07 11:22:51,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 04:22:54] 2025-10-07 11:22:51,840 | INFO     | traces error code: 0
[2025-10-07 04:22:54] 2025-10-07 11:22:51,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 04:22:54] 2025-10-07 11:22:52,905 | INFO     | PID=767295 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 04:22:54] 2025-10-07 11:22:52,905 | INFO     | .. there are 42 such processes running
[2025-10-07 04:22:54] 2025-10-07 11:22:52,906 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 04:22:54] 2025-10-07 11:22:52,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 04:22:54] 2025-10-07 11:22:52,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 04:22:54] 2025-10-07 11:22:52,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 04:22:54] 2025-10-07 11:22:52,906 | INFO     | [monitor] control thread has ended
[2025-10-07 04:22:54] 2025-10-07 11:22:53,386 [wrapper] ==== pilot stdout END ====
[2025-10-07 04:22:54] 2025-10-07 11:22:53,403 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 04:22:54] 2025-10-07 11:22:53,439 [wrapper] pilotpid: 767295
[2025-10-07 04:22:54] 2025-10-07 11:22:53,456 [wrapper] Pilot exit status: 0
[2025-10-07 04:22:54] 2025-10-07 11:22:53,552 [wrapper] pandaids: 6833425959
[2025-10-07 04:22:54] 2025-10-07 11:22:53,778 [wrapper] cleanup supervisor_pilot  767345 767296
[2025-10-07 04:22:54] 2025-10-07 11:22:53,781 [wrapper] Test setup, not cleaning
[2025-10-07 04:22:54] 2025-10-07 11:22:53,783 [wrapper] apfmon messages muted
[2025-10-07 04:22:54] 2025-10-07 11:22:53,785 [wrapper] ==== wrapper stdout END ====
[2025-10-07 04:22:54] 2025-10-07 11:22:53,787 [wrapper] ==== wrapper stderr END ====
[2025-10-07 04:22:54]  *** Error codes and diagnostics ***
[2025-10-07 04:22:54]     "exeErrorCode": 65,
[2025-10-07 04:22:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-07 04:22:54]     "pilotErrorCode": 1305,
[2025-10-07 04:22:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-07 04:22:54]  *** Listing of results directory ***
[2025-10-07 04:22:54] total 212528
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc    552446 Oct  7 01:37 pilot3.tar.gz
[2025-10-07 04:22:54] -rwx------. 1 boinc boinc     36292 Oct  7 01:49 runpilot2-wrapper.sh
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc      5112 Oct  7 01:49 queuedata.json
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc       100 Oct  7 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 04:22:54] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 04:18 run_atlas
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc       105 Oct  7 04:18 job.xml
[2025-10-07 04:22:54] -rw-r--r--. 2 boinc boinc 213517714 Oct  7 04:18 EVNT.46376901._004892.pool.root.1
[2025-10-07 04:22:54] -rw-r--r--. 2 boinc boinc    565600 Oct  7 04:18 input.tar.gz
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc      6593 Oct  7 04:18 init_data.xml
[2025-10-07 04:22:54] -rw-r--r--. 2 boinc boinc     15120 Oct  7 04:18 start_atlas.sh
[2025-10-07 04:22:54] drwxrwx--x. 2 boinc boinc      4096 Oct  7 04:18 shared
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc         0 Oct  7 04:18 boinc_lockfile
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc      2520 Oct  7 04:18 pandaJob.out
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc    975010 Oct  7 04:18 agis_schedconf.cvmfs.json
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc   1560401 Oct  7 04:18 agis_ddmendpoints.agis.ALL.json
[2025-10-07 04:22:54] drwx------. 4 boinc boinc      4096 Oct  7 04:18 pilot3
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc       965 Oct  7 04:20 memory_monitor_summary.json
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc     21567 Oct  7 04:20 log.46376905._131462.job.log.tgz.1
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc      8402 Oct  7 04:22 heartbeat.json
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc       524 Oct  7 04:22 boinc_task_state.xml
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc      8192 Oct  7 04:22 boinc_mmap_file
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc        22 Oct  7 04:22 wrapper_checkpoint.txt
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc       822 Oct  7 04:22 pilotlog.txt
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc        95 Oct  7 04:22 pilot_heartbeat.json
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc     88183 Oct  7 04:22 log.46376905._131462.job.log.1
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc       188 Oct  7 04:22 output.list
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc       620 Oct  7 04:22 runtime_log
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc    133120 Oct  7 04:22 result.tar.gz
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc      8528 Oct  7 04:22 runtime_log.err
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc       644 Oct  7 04:22 h1NKDmaZIQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7ZWNDmRAuKdn.diag
[2025-10-07 04:22:54] -rw-r--r--. 1 boinc boinc     21705 Oct  7 04:22 stderr.txt
[2025-10-07 04:22:54] No HITS result produced
[2025-10-07 04:22:54]  *** Contents of shared directory: ***
[2025-10-07 04:22:54] total 209224
[2025-10-07 04:22:54] -rw-r--r--. 2 boinc boinc 213517714 Oct  7 04:18 ATLAS.root_0
[2025-10-07 04:22:54] -rw-r--r--. 2 boinc boinc    565600 Oct  7 04:18 input.tar.gz
[2025-10-07 04:22:54] -rw-r--r--. 2 boinc boinc     15120 Oct  7 04:18 start_atlas.sh
[2025-10-07 04:22:54] -rw-------. 1 boinc boinc    133120 Oct  7 04:22 result.tar.gz
04:22:55 (756438): run_atlas exited; CPU time 24.950802
04:22:55 (756438): called boinc_finish(0)

</stderr_txt>
]]>

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