Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:01:50 (479421): wrapper (7.7.26015): starting
12:01:50 (479421): wrapper: running run_atlas (--nthreads 2)
[2025-10-07 12:01:50] Arguments: --nthreads 2
[2025-10-07 12:01:50] Threads: 2
[2025-10-07 12:01:50] Checking for CVMFS
[2025-10-07 12:01:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 12:01:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 12:01:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 12:01:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 12:01:51] 2.9.2.0 143206 1330 56228 151432 1 57 1866652 36864001 0 130560 0 892473 99.988 49168 1425 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-07 12:01:51] CVMFS is ok
[2025-10-07 12:01:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 12:01:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 12:01:51] Further information can be found at the LHC@home message board.
[2025-10-07 12:01:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 12:01:51] Checking for apptainer binary...
[2025-10-07 12:01:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 12:01:51] Running /usr/bin/apptainer --version
[2025-10-07 12:01:51] apptainer version 1.4.1-1.1
[2025-10-07 12:01:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 12:01:51] atlasA228a
[2025-10-07 12:01:51] apptainer works
[2025-10-07 12:01:51] Set ATHENA_PROC_NUMBER=2
[2025-10-07 12:01:51] Set ATHENA_CORE_NUMBER=2
[2025-10-07 12:01:51] Starting ATLAS job with PandaID=6832972719
[2025-10-07 12:01:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 13:55:20]  *** The last 200 lines of the pilot log: ***
[2025-10-07 13:55:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 13:55:20] ANSI_COLOR="0;31"
[2025-10-07 13:55:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 13:55:20] HOME_URL="https://www.centos.org/"
[2025-10-07 13:55:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 13:55:20] 
[2025-10-07 13:55:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 13:55:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 13:55:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 13:55:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 13:55:20] 
[2025-10-07 13:55:20] 2025-10-07 11:54:22,944 | INFO     | ***************************************
[2025-10-07 13:55:20] 2025-10-07 11:54:23,447 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-07 13:55:20] 2025-10-07 11:54:23,459 | INFO     | sufficient remaining disk space (209746657280 B)
[2025-10-07 13:55:20] 2025-10-07 11:54:23,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 13:55:20] 2025-10-07 11:54:23,460 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 13:55:20] 2025-10-07 11:54:23,460 | INFO     | update_server=False
[2025-10-07 13:55:20] 2025-10-07 11:54:23,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 13:55:20] 2025-10-07 11:54:23,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 13:55:20] 2025-10-07 11:54:23,460 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-07 13:55:20] 2025-10-07 11:54:23,460 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 13:55:20] 2025-10-07 11:54:23,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 13:55:20] 2025-10-07 11:54:23,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 13:55:20] 2025-10-07 11:54:23,611 | INFO     | all data control threads have been joined
[2025-10-07 13:55:20] 2025-10-07 11:54:23,956 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 13:55:20] 2025-10-07 11:54:23,956 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 13:55:20] 2025-10-07 11:54:23,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 13:55:20] 2025-10-07 11:54:23,958 | INFO     | will abort loop
[2025-10-07 13:55:20] 2025-10-07 11:54:24,465 | INFO     | [job] queue monitor thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:24,465 | INFO     | [job] retrieve thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:24,517 | INFO     | all payload control threads have been joined
[2025-10-07 13:55:20] 2025-10-07 11:54:24,617 | INFO     | [data] control thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:24,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 13:55:20] 2025-10-07 11:54:24,860 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:24,890 | INFO     | all job control threads have been joined
[2025-10-07 13:55:20] 2025-10-07 11:54:24,964 | INFO     | [job] job monitor thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:25,041 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:25,064 | INFO     | [job] validate thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:25,245 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 13:55:20] 2025-10-07 11:54:25,297 | INFO     | [payload] failed_post thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:25,297 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:25,388 | INFO     | [data] copytool_in thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:25,523 | INFO     | [payload] control thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:25,892 | INFO     | [payload] validate_post thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:25,896 | INFO     | [job] control thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:26,680 | INFO     | [data] copytool_out thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:29,252 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:54:33,799 | INFO     | job.realtimelogging is not enabled
[2025-10-07 13:55:20] 2025-10-07 11:54:34,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 13:55:20] 2025-10-07 11:55:14,599 | INFO     | [monitor] cgroup control has ended
[2025-10-07 13:55:20] 2025-10-07 11:55:15,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229517449024)>', '<ExcThread(monitor, started 140228752807680)>']
[2025-10-07 13:55:20] 2025-10-07 11:55:15,739 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 13:55:20] 2025-10-07 11:55:15,739 | INFO     | [monitor] control thread has ended
[2025-10-07 13:55:20] 2025-10-07 11:55:20,263 | INFO     | all workflow threads have been joined
[2025-10-07 13:55:20] 2025-10-07 11:55:20,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 13:55:20] 2025-10-07 11:55:20,264 | INFO     | traces error code: 0
[2025-10-07 13:55:20] 2025-10-07 11:55:20,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 13:55:20] 2025-10-07 11:55:20,308 [wrapper] ==== pilot stdout END ====
[2025-10-07 13:55:20] 2025-10-07 11:55:20,311 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 13:55:20] 2025-10-07 11:55:20,313 [wrapper] pilotpid: 483126
[2025-10-07 13:55:20] 2025-10-07 11:55:20,316 [wrapper] Pilot exit status: 0
[2025-10-07 13:55:20] 2025-10-07 11:55:20,322 [wrapper] pandaids: 6832972719
[2025-10-07 13:55:20] 2025-10-07 11:55:20,335 [wrapper] cleanup supervisor_pilot  503541 483127
[2025-10-07 13:55:20] 2025-10-07 11:55:20,337 [wrapper] Test setup, not cleaning
[2025-10-07 13:55:20] 2025-10-07 11:55:20,340 [wrapper] apfmon messages muted
[2025-10-07 13:55:20] 2025-10-07 11:55:20,342 [wrapper] ==== wrapper stdout END ====
[2025-10-07 13:55:20] 2025-10-07 11:55:20,345 [wrapper] ==== wrapper stderr END ====
[2025-10-07 13:55:20]  *** Error codes and diagnostics ***
[2025-10-07 13:55:20]     "exeErrorCode": 0,
[2025-10-07 13:55:20]     "exeErrorDiag": "",
[2025-10-07 13:55:20]     "pilotErrorCode": 0,
[2025-10-07 13:55:20]     "pilotErrorDiag": "",
[2025-10-07 13:55:20]  *** Listing of results directory ***
[2025-10-07 13:55:20] total 389520
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc    552446 Oct  6 22:30 pilot3.tar.gz
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc      5112 Oct  6 22:32 queuedata.json
[2025-10-07 13:55:20] -rwx------ 1 boinc boinc     36292 Oct  6 22:32 runpilot2-wrapper.sh
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc       100 Oct  7 12:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 13:55:20] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 12:01 run_atlas
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc       105 Oct  7 12:01 job.xml
[2025-10-07 13:55:20] -rw-r--r-- 2 boinc boinc 212284694 Oct  7 12:01 EVNT.46376901._004404.pool.root.1
[2025-10-07 13:55:20] -rw-r--r-- 2 boinc boinc    565603 Oct  7 12:01 input.tar.gz
[2025-10-07 13:55:20] -rw-r--r-- 2 boinc boinc     15120 Oct  7 12:01 start_atlas.sh
[2025-10-07 13:55:20] drwxrwx--x 2 boinc boinc      4096 Oct  7 12:01 shared
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc         0 Oct  7 12:01 boinc_setup_complete
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc      6206 Oct  7 12:01 init_data.xml
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc         0 Oct  7 12:01 boinc_lockfile
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc      2520 Oct  7 12:01 pandaJob.out
[2025-10-07 13:55:20] -rw------- 1 boinc boinc    974994 Oct  7 12:02 agis_schedconf.cvmfs.json
[2025-10-07 13:55:20] -rw------- 1 boinc boinc   1560401 Oct  7 12:02 agis_ddmendpoints.agis.ALL.json
[2025-10-07 13:55:20] drwx------ 4 boinc boinc      4096 Oct  7 12:02 pilot3
[2025-10-07 13:55:20] -rw------- 1 boinc boinc        95 Oct  7 13:53 pilot_heartbeat.json
[2025-10-07 13:55:20] -rw------- 1 boinc boinc 180262874 Oct  7 13:53 HITS.46376905._118737.pool.root.1
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc       529 Oct  7 13:53 boinc_task_state.xml
[2025-10-07 13:55:20] -rw------- 1 boinc boinc      1013 Oct  7 13:54 memory_monitor_summary.json
[2025-10-07 13:55:20] -rw------- 1 boinc boinc    252026 Oct  7 13:54 log.46376905._118737.job.log.tgz.1
[2025-10-07 13:55:20] -rw------- 1 boinc boinc      7759 Oct  7 13:54 heartbeat.json
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc      8192 Oct  7 13:55 boinc_mmap_file
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc        27 Oct  7 13:55 wrapper_checkpoint.txt
[2025-10-07 13:55:20] -rw------- 1 boinc boinc      4814 Oct  7 13:55 pilotlog.txt
[2025-10-07 13:55:20] -rw------- 1 boinc boinc    968065 Oct  7 13:55 log.46376905._118737.job.log.1
[2025-10-07 13:55:20] -rw------- 1 boinc boinc       357 Oct  7 13:55 output.list
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc       620 Oct  7 13:55 runtime_log
[2025-10-07 13:55:20] -rw------- 1 boinc boinc   1239040 Oct  7 13:55 result.tar.gz
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc      8797 Oct  7 13:55 runtime_log.err
[2025-10-07 13:55:20] -rw------- 1 boinc boinc       663 Oct  7 13:55 CFsKDmH46P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmieUNDmHgBSDo.diag
[2025-10-07 13:55:20] -rw-r--r-- 1 boinc boinc      8751 Oct  7 13:55 stderr.txt
[2025-10-07 13:55:20] HITS file was successfully produced:
[2025-10-07 13:55:20] -rw------- 1 boinc boinc 180262874 Oct  7 13:53 shared/HITS.pool.root.1
[2025-10-07 13:55:20]  *** Contents of shared directory: ***
[2025-10-07 13:55:20] total 385144
[2025-10-07 13:55:20] -rw-r--r-- 2 boinc boinc 212284694 Oct  7 12:01 ATLAS.root_0
[2025-10-07 13:55:20] -rw-r--r-- 2 boinc boinc    565603 Oct  7 12:01 input.tar.gz
[2025-10-07 13:55:20] -rw-r--r-- 2 boinc boinc     15120 Oct  7 12:01 start_atlas.sh
[2025-10-07 13:55:20] -rw------- 1 boinc boinc 180262874 Oct  7 13:53 HITS.pool.root.1
[2025-10-07 13:55:20] -rw------- 1 boinc boinc   1239040 Oct  7 13:55 result.tar.gz
13:55:22 (479421): run_atlas exited; CPU time 13016.395089
13:55:22 (479421): called boinc_finish(0)

</stderr_txt>
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