Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:10:16 (20635): wrapper (7.7.26015): starting
06:10:16 (20635): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 06:10:16] Arguments: --nthreads 12
[2025-10-07 06:10:16] Threads: 12
[2025-10-07 06:10:16] Checking for CVMFS
[2025-10-07 06:10:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 06:10:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 06:10:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 06:10:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 06:10:17] 2.11.2.0 2945 215544 102496 151432 1 57 18453813 20275200 1 130560 2 103322885 99.984 13169291 12609 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 06:10:17] CVMFS is ok
[2025-10-07 06:10:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 06:10:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 06:10:17] Further information can be found at the LHC@home message board.
[2025-10-07 06:10:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 06:10:17] Checking for apptainer binary...
[2025-10-07 06:10:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 06:10:17] Running /usr/bin/apptainer --version
[2025-10-07 06:10:17] apptainer version 1.3.2-1.el7
[2025-10-07 06:10:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 06:10:18] c-205-2.aglt2.org
[2025-10-07 06:10:18] apptainer works
[2025-10-07 06:10:18] Set ATHENA_PROC_NUMBER=12
[2025-10-07 06:10:18] Set ATHENA_CORE_NUMBER=12
[2025-10-07 06:10:18] Starting ATLAS job with PandaID=6832861918
[2025-10-07 06:10:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 07:14:45]  *** The last 200 lines of the pilot log: ***
[2025-10-07 07:14:45]  storage_token=
[2025-10-07 07:14:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6832861918/log.46376905._116522.job.log.tgz.1
[2025-10-07 07:14:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/53/log.46376905._116522.job.log.tgz.1
[2025-10-07 07:14:45]  workdir=None
[2025-10-07 07:14:45] ]
[2025-10-07 07:14:45] 2025-10-07 11:13:50,671 | INFO     | transferring file log.46376905._116522.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6832861918/log.46376905._116522.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-07 07:14:45] 2025-10-07 11:13:50,671 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6832861918/log.46376905._116522.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._116522.job
[2025-10-07 07:14:45] 2025-10-07 11:13:50,693 | INFO     | adding to output.list: log.46376905._116522.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/53/log.46376905._116522.job.log.tg
[2025-10-07 07:14:45] 2025-10-07 11:13:50,693 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 07:14:45] 2025-10-07 11:13:50,694 | INFO     | summary of transferred files:
[2025-10-07 07:14:45] 2025-10-07 11:13:50,694 | INFO     |  -- lfn=log.46376905._116522.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 07:14:45] 2025-10-07 11:13:50,694 | INFO     | stage-out finished correctly
[2025-10-07 07:14:45] 2025-10-07 11:13:51,370 | INFO     | time since job start (3798s) is within the limit (172800.0s)
[2025-10-07 07:14:45] 2025-10-07 11:13:53,151 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 07:14:45] 2025-10-07 11:13:53,373 | INFO     | time since job start (3800s) is within the limit (172800.0s)
[2025-10-07 07:14:45] 2025-10-07 11:13:53,604 | WARNING  | process 30687 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 07:14:45] 2025-10-07 11:13:53,604 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832861918/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 07:14:45] 2025-10-07 11:13:53,692 | INFO     | number of running child processes to parent process 30687: 1
[2025-10-07 07:14:45] 2025-10-07 11:13:53,692 | INFO     | maximum number of monitored processes: 6
[2025-10-07 07:14:45] 2025-10-07 11:13:54,452 | INFO     | job 6832861918 has state=finished
[2025-10-07 07:14:45] 2025-10-07 11:13:54,452 | INFO     | preparing for final server update for job 6832861918 in state='finished'
[2025-10-07 07:14:45] 2025-10-07 11:13:54,452 | INFO     | this job has now completed (state=finished)
[2025-10-07 07:14:45] 2025-10-07 11:13:54,453 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 07:14:45] 2025-10-07 11:13:54,453 | INFO     | log transfer has been attempted: DONE
[2025-10-07 07:14:45] 2025-10-07 11:13:54,453 | INFO     | job 6832861918 has finished - writing final server update
[2025-10-07 07:14:45] 2025-10-07 11:13:54,453 | INFO     | total number of processed events: 400 (read)
[2025-10-07 07:14:45] 2025-10-07 11:13:54,454 | INFO     | executing command: lscpu
[2025-10-07 07:14:45] 2025-10-07 11:13:54,480 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 07:14:45] 2025-10-07 11:13:55,374 | INFO     | time since job start (3802s) is within the limit (172800.0s)
[2025-10-07 07:14:45] 2025-10-07 11:13:56,195 | INFO     | monitor loop #286: job 0:6832861918 is in state 'finished'
[2025-10-07 07:14:45] 2025-10-07 11:13:56,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 07:14:45] 2025-10-07 11:13:57,382 | INFO     | time since job start (3804s) is within the limit (172800.0s)
[2025-10-07 07:14:45] 2025-10-07 11:13:58,699 | INFO     | monitor loop #287: job 0:6832861918 is in state 'finished'
[2025-10-07 07:14:45] 2025-10-07 11:13:58,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 07:14:45] 2025-10-07 11:13:59,188 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-07 07:14:45] 2025-10-07 11:13:59,191 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-07 07:14:45] 2025-10-07 11:13:59,194 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832861918/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 07:14:45] 2025-10-07 11:13:59,195 | INFO     | extracted standard info from prmon json
[2025-10-07 07:14:45] 2025-10-07 11:13:59,195 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 07:14:45] 2025-10-07 11:13:59,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 07:14:45] 2025-10-07 11:13:59,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 07:14:45] 2025-10-07 11:13:59,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 07:14:45] 2025-10-07 11:13:59,198 | INFO     | fitting pss+swap vs Time
[2025-10-07 07:14:45] 2025-10-07 11:13:59,198 | INFO     | sum of square deviations: 51573060.0
[2025-10-07 07:14:45] 2025-10-07 11:13:59,198 | INFO     | sum of deviations: 391559854.0000001
[2025-10-07 07:14:45] 2025-10-07 11:13:59,198 | INFO     | mean x: 1759833814.0
[2025-10-07 07:14:45] 2025-10-07 11:13:59,199 | INFO     | mean y: 2657918.7818181817
[2025-10-07 07:14:45] 2025-10-07 11:13:59,199 | INFO     | -- intersect: -13358586716.966059
[2025-10-07 07:14:45] 2025-10-07 11:13:59,199 | INFO     | intersect: -13358586716.966059
[2025-10-07 07:14:45] 2025-10-07 11:13:59,199 | INFO     | chi2: 0.0018140366020601357
[2025-10-07 07:14:45] 2025-10-07 11:13:59,199 | INFO     | -- intersect: -13358586716.966059
[2025-10-07 07:14:45] 2025-10-07 11:13:59,199 | INFO     | current memory leak: 7.59 B/s (using 55 data points, chi2=0.00)
[2025-10-07 07:14:45] 2025-10-07 11:13:59,200 | INFO     | could have reported an average CPU frequency of 1982 MHz (6 samples)
[2025-10-07 07:14:45] 2025-10-07 11:13:59,200 | INFO     | ..............................
[2025-10-07 07:14:45] 2025-10-07 11:13:59,200 | INFO     | . Timing measurements:
[2025-10-07 07:14:45] 2025-10-07 11:13:59,200 | INFO     | . get job = 0 s
[2025-10-07 07:14:45] 2025-10-07 11:13:59,200 | INFO     | . initial setup = 2 s
[2025-10-07 07:14:45] 2025-10-07 11:13:59,200 | INFO     | . payload setup = 7 s
[2025-10-07 07:14:45] 2025-10-07 11:13:59,200 | INFO     | . stage-in = 0 s
[2025-10-07 07:14:45] 2025-10-07 11:13:59,200 | INFO     | . payload execution = 3769 s
[2025-10-07 07:14:45] 2025-10-07 11:13:59,200 | INFO     | . stage-out = 0 s
[2025-10-07 07:14:45] 2025-10-07 11:13:59,201 | INFO     | . log creation = 0 s
[2025-10-07 07:14:45] 2025-10-07 11:13:59,201 | INFO     | ..............................
[2025-10-07 07:14:45] 2025-10-07 11:13:59,282 | INFO     | 
[2025-10-07 07:14:45] 2025-10-07 11:13:59,282 | INFO     | job summary report
[2025-10-07 07:14:45] 2025-10-07 11:13:59,283 | INFO     | --------------------------------------------------
[2025-10-07 07:14:45] 2025-10-07 11:13:59,283 | INFO     | PanDA job id: 6832861918
[2025-10-07 07:14:45] 2025-10-07 11:13:59,283 | INFO     | task id: 46376905
[2025-10-07 07:14:45] 2025-10-07 11:13:59,283 | INFO     | errors: (none)
[2025-10-07 07:14:45] 2025-10-07 11:13:59,283 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 07:14:45] 2025-10-07 11:13:59,283 | INFO     | pilot state: finished 
[2025-10-07 07:14:45] 2025-10-07 11:13:59,284 | INFO     | transexitcode: 0
[2025-10-07 07:14:45] 2025-10-07 11:13:59,284 | INFO     | exeerrorcode: 0
[2025-10-07 07:14:45] 2025-10-07 11:13:59,284 | INFO     | exeerrordiag: 
[2025-10-07 07:14:45] 2025-10-07 11:13:59,284 | INFO     | exitcode: 0
[2025-10-07 07:14:45] 2025-10-07 11:13:59,284 | INFO     | exitmsg: OK
[2025-10-07 07:14:45] 2025-10-07 11:13:59,284 | INFO     | cpuconsumptiontime: 40337 s
[2025-10-07 07:14:45] 2025-10-07 11:13:59,285 | INFO     | nevents: 400
[2025-10-07 07:14:45] 2025-10-07 11:13:59,285 | INFO     | neventsw: 0
[2025-10-07 07:14:45] 2025-10-07 11:13:59,285 | INFO     | pid: 30687
[2025-10-07 07:14:45] 2025-10-07 11:13:59,285 | INFO     | pgrp: 30687
[2025-10-07 07:14:45] 2025-10-07 11:13:59,285 | INFO     | corecount: 12
[2025-10-07 07:14:45] 2025-10-07 11:13:59,285 | INFO     | event service: False
[2025-10-07 07:14:45] 2025-10-07 11:13:59,286 | INFO     | sizes: {0: 2348703, 1: 2348845, 6: 2349107, 11: 2349135, 3780: 2374887, 3781: 2383885, 3783: 2384069, 3789: 2384263}
[2025-10-07 07:14:45] 2025-10-07 11:13:59,286 | INFO     | --------------------------------------------------
[2025-10-07 07:14:45] 2025-10-07 11:13:59,286 | INFO     | 
[2025-10-07 07:14:45] 2025-10-07 11:13:59,286 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 07:14:45] 2025-10-07 11:13:59,310 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,311 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,311 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,311 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,313 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 07:14:45] 2025-10-07 11:13:59,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 07:14:45] 2025-10-07 11:13:59,314 | INFO     | job 6832861918 has completed (purged errors)
[2025-10-07 07:14:45] 2025-10-07 11:13:59,314 | INFO     | overall cleanup function is called
[2025-10-07 07:14:45] 2025-10-07 11:14:00,322 | INFO     | --- collectZombieJob: --- 10, [30687]
[2025-10-07 07:14:45] 2025-10-07 11:14:00,323 | INFO     | zombie collector waiting for pid 30687
[2025-10-07 07:14:45] 2025-10-07 11:14:00,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 07:14:45] 2025-10-07 11:14:00,323 | INFO     | collected zombie processes
[2025-10-07 07:14:45] 2025-10-07 11:14:00,323 | INFO     | will attempt to kill all subprocesses of pid=30687
[2025-10-07 07:14:45] 2025-10-07 11:14:00,414 | INFO     | process IDs to be killed: [30687] (in reverse order)
[2025-10-07 07:14:45] 2025-10-07 11:14:00,493 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 07:14:45] 2025-10-07 11:14:00,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 07:14:45] 2025-10-07 11:14:00,498 | INFO     | did not find any defunct processes belonging to 30687
[2025-10-07 07:14:45] 2025-10-07 11:14:00,501 | INFO     | did not find any defunct processes belonging to 30687
[2025-10-07 07:14:45] 2025-10-07 11:14:00,501 | INFO     | ready for new job
[2025-10-07 07:14:45] 2025-10-07 11:14:00,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 07:14:45] 2025-10-07 11:14:00,502 | INFO     | ***************************************
[2025-10-07 07:14:45] 2025-10-07 11:14:00,502 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 07:14:45] 2025-10-07 11:14:00,502 | INFO     | ***************************************
[2025-10-07 07:14:45] 2025-10-07 11:14:00,502 | INFO     | 
[2025-10-07 07:14:45] 2025-10-07 11:14:00,503 | INFO     | architecture information:
[2025-10-07 07:14:45] 2025-10-07 11:14:00,503 | INFO     | executing command: cat /etc/os-release
[2025-10-07 07:14:45] 2025-10-07 11:14:00,518 | INFO     | cat /etc/os-release:
[2025-10-07 07:14:45] NAME="CentOS Linux"
[2025-10-07 07:14:45] VERSION="7 (Core)"
[2025-10-07 07:14:45] ID="centos"
[2025-10-07 07:14:45] ID_LIKE="rhel fedora"
[2025-10-07 07:14:45] VERSION_ID="7"
[2025-10-07 07:14:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 07:14:45] ANSI_COLOR="0;31"
[2025-10-07 07:14:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 07:14:45] HOME_URL="https://www.centos.org/"
[2025-10-07 07:14:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 07:14:45] 
[2025-10-07 07:14:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 07:14:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 07:14:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 07:14:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 07:14:45] 
[2025-10-07 07:14:45] 2025-10-07 11:14:00,518 | INFO     | ***************************************
[2025-10-07 07:14:45] 2025-10-07 11:14:01,021 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 07:14:45] 2025-10-07 11:14:01,038 | INFO     | sufficient remaining disk space (29457645568 B)
[2025-10-07 07:14:45] 2025-10-07 11:14:01,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 07:14:45] 2025-10-07 11:14:01,039 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 07:14:45] 2025-10-07 11:14:01,039 | INFO     | update_server=False
[2025-10-07 07:14:45] 2025-10-07 11:14:01,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 07:14:45] 2025-10-07 11:14:01,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 07:14:45] 2025-10-07 11:14:01,073 | INFO     | all job control threads have been joined
[2025-10-07 07:14:45] 2025-10-07 11:14:01,200 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 07:14:45] 2025-10-07 11:14:01,200 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 07:14:45] 2025-10-07 11:14:01,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 07:14:45] 2025-10-07 11:14:01,200 | INFO     | will abort loop
[2025-10-07 07:14:45] 2025-10-07 11:14:01,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 07:14:45] 2025-10-07 11:14:01,673 | INFO     | all payload control threads have been joined
[2025-10-07 07:14:45] 2025-10-07 11:14:01,758 | INFO     | all data control threads have been joined
[2025-10-07 07:14:45] 2025-10-07 11:14:02,044 | INFO     | [job] queue monitor thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:02,044 | INFO     | [job] retrieve thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:02,079 | INFO     | [job] control thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:02,202 | INFO     | [job] job monitor thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:02,336 | INFO     | [payload] failed_post thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:02,443 | INFO     | [data] copytool_in thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:02,492 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:02,679 | INFO     | [payload] control thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:02,763 | INFO     | [data] control thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:02,888 | INFO     | [job] validate thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:03,223 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:03,298 | INFO     | [data] copytool_out thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:03,338 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:03,379 | INFO     | [payload] validate_post thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:03,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 07:14:45] 2025-10-07 11:14:07,752 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:11,555 | INFO     | job.realtimelogging is not enabled
[2025-10-07 07:14:45] 2025-10-07 11:14:12,560 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 07:14:45] 2025-10-07 11:14:30,586 | INFO     | PID=24332 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 07:14:45] 2025-10-07 11:14:30,586 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 07:14:45] 2025-10-07 11:14:30,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 07:14:45] 2025-10-07 11:14:30,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 07:14:45] 2025-10-07 11:14:39,518 | INFO     | [monitor] cgroup control has ended
[2025-10-07 07:14:45] 2025-10-07 11:14:40,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754115913536)>', '<ExcThread(monitor, started 139753521403648)>']
[2025-10-07 07:14:45] 2025-10-07 11:14:40,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 07:14:45] 2025-10-07 11:14:40,634 | INFO     | [monitor] control thread has ended
[2025-10-07 07:14:45] 2025-10-07 11:14:45,226 | INFO     | all workflow threads have been joined
[2025-10-07 07:14:45] 2025-10-07 11:14:45,226 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 07:14:45] 2025-10-07 11:14:45,233 | INFO     | traces error code: 0
[2025-10-07 07:14:45] 2025-10-07 11:14:45,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 07:14:45] 2025-10-07 11:14:45,321 [wrapper] ==== pilot stdout END ====
[2025-10-07 07:14:45] 2025-10-07 11:14:45,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 07:14:45] 2025-10-07 11:14:45,329 [wrapper] pilotpid: 24332
[2025-10-07 07:14:45] 2025-10-07 11:14:45,333 [wrapper] Pilot exit status: 0
[2025-10-07 07:14:45] 2025-10-07 11:14:45,349 [wrapper] pandaids: 6832861918
[2025-10-07 07:14:45] 2025-10-07 11:14:45,395 [wrapper] cleanup supervisor_pilot  4953 24333
[2025-10-07 07:14:45] 2025-10-07 11:14:45,399 [wrapper] Test setup, not cleaning
[2025-10-07 07:14:45] 2025-10-07 11:14:45,403 [wrapper] apfmon messages muted
[2025-10-07 07:14:45] 2025-10-07 11:14:45,407 [wrapper] ==== wrapper stdout END ====
[2025-10-07 07:14:45] 2025-10-07 11:14:45,411 [wrapper] ==== wrapper stderr END ====
[2025-10-07 07:14:45]  *** Error codes and diagnostics ***
[2025-10-07 07:14:45]     "exeErrorCode": 0,
[2025-10-07 07:14:45]     "exeErrorDiag": "",
[2025-10-07 07:14:45]     "pilotErrorCode": 0,
[2025-10-07 07:14:45]     "pilotErrorDiag": "",
[2025-10-07 07:14:45]  *** Listing of results directory ***
[2025-10-07 07:14:45] total 389376
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas    552446 Oct  6 14:35 pilot3.tar.gz
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas      5112 Oct  6 14:44 queuedata.json
[2025-10-07 07:14:45] -rwx------ 1 boincer umatlas     36292 Oct  6 14:44 runpilot2-wrapper.sh
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas       100 Oct  7 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 07:14:45] -rwxr-xr-x 1 boincer umatlas      7986 Oct  7 06:10 run_atlas
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas       105 Oct  7 06:10 job.xml
[2025-10-07 07:14:45] -rw-r--r-- 2 boincer umatlas 216559755 Oct  7 06:10 EVNT.46376901._004324.pool.root.1
[2025-10-07 07:14:45] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 06:10 start_atlas.sh
[2025-10-07 07:14:45] drwxrwx--x 2 boincer umatlas      4096 Oct  7 06:10 shared
[2025-10-07 07:14:45] -rw-r--r-- 2 boincer umatlas    565594 Oct  7 06:10 input.tar.gz
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas         0 Oct  7 06:10 boinc_lockfile
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas      2519 Oct  7 06:10 pandaJob.out
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas    974994 Oct  7 06:10 agis_schedconf.cvmfs.json
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas   1560401 Oct  7 06:10 agis_ddmendpoints.agis.ALL.json
[2025-10-07 07:14:45] drwx------ 4 boincer umatlas      4096 Oct  7 06:10 pilot3
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas      5952 Oct  7 07:09 init_data.xml
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas 176425757 Oct  7 07:13 HITS.46376905._116522.pool.root.1
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas      1049 Oct  7 07:13 memory_monitor_summary.json
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas    360518 Oct  7 07:13 log.46376905._116522.job.log.tgz.1
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas       529 Oct  7 07:13 boinc_task_state.xml
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas      7850 Oct  7 07:13 heartbeat.json
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas      8192 Oct  7 07:14 boinc_mmap_file
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas        27 Oct  7 07:14 wrapper_checkpoint.txt
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas        95 Oct  7 07:14 pilot_heartbeat.json
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas      5004 Oct  7 07:14 pilotlog.txt
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas    561227 Oct  7 07:14 log.46376905._116522.job.log.1
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas       357 Oct  7 07:14 output.list
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas       620 Oct  7 07:14 runtime_log
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas    942080 Oct  7 07:14 result.tar.gz
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas      8700 Oct  7 07:14 runtime_log.err
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas       658 Oct  7 07:14 PwJMDmWN5P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUlJMDmHiookm.diag
[2025-10-07 07:14:45] -rw-r--r-- 1 boincer umatlas     22174 Oct  7 07:14 stderr.txt
[2025-10-07 07:14:45] HITS file was successfully produced:
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas 176425757 Oct  7 07:13 shared/HITS.pool.root.1
[2025-10-07 07:14:45]  *** Contents of shared directory: ***
[2025-10-07 07:14:45] total 385276
[2025-10-07 07:14:45] -rw-r--r-- 2 boincer umatlas 216559755 Oct  7 06:10 ATLAS.root_0
[2025-10-07 07:14:45] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 06:10 start_atlas.sh
[2025-10-07 07:14:45] -rw-r--r-- 2 boincer umatlas    565594 Oct  7 06:10 input.tar.gz
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas 176425757 Oct  7 07:13 HITS.pool.root.1
[2025-10-07 07:14:45] -rw------- 1 boincer umatlas    942080 Oct  7 07:14 result.tar.gz
07:14:46 (20635): run_atlas exited; CPU time 40310.558892
07:14:46 (20635): called boinc_finish(0)

</stderr_txt>
]]>

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