Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-07 08:21:56 (182499): vboxwrapper version 26210
2025-10-07 08:21:56 (182499): BOINC client version: 8.0.4
2025-10-07 08:21:56 (182499): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-10-07 08:21:57 (182499): Successfully copied 'init_data.xml' to the shared directory.
2025-10-07 08:21:57 (182499): Create VM. (boinc_b4eeba85e13794ee, slot#0)
2025-10-07 08:21:58 (182499): Setting Memory Size for VM. (4200MB)
2025-10-07 08:21:58 (182499): Setting CPU Count for VM. (2)
2025-10-07 08:21:59 (182499): Setting Chipset Options for VM.
2025-10-07 08:21:59 (182499): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-07 08:21:59 (182499): Setting Boot Options for VM.
2025-10-07 08:22:00 (182499): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-07 08:22:01 (182499): Enabling VM Network Access.
2025-10-07 08:22:01 (182499): Disabling USB Support for VM.
2025-10-07 08:22:01 (182499): Disabling COM Port Support for VM.
2025-10-07 08:22:02 (182499): Disabling LPT Port Support for VM.
2025-10-07 08:22:02 (182499): Disabling Audio Support for VM.
2025-10-07 08:22:03 (182499): Disabling Clipboard Support for VM.
2025-10-07 08:22:03 (182499): Disabling Drag and Drop Support for VM.
2025-10-07 08:22:03 (182499): Adding storage controller(s) to VM.
2025-10-07 08:22:04 (182499): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-07 08:22:07 (182499): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-07 08:22:07 (182499): forwarding host port 34057 to guest port 80
2025-10-07 08:22:08 (182499): Enabling remote desktop for VM.
2025-10-07 08:22:09 (182499): Enabling shared directory for VM.
2025-10-07 08:22:12 (182499): Starting VM using VBoxManage interface. (boinc_b4eeba85e13794ee, slot#0)
2025-10-07 08:22:14 (182499): Successfully started VM. (PID = '182990')
2025-10-07 08:22:14 (182499): Reporting VM Process ID to BOINC.
2025-10-07 08:22:14 (182499): Guest Log: BIOS: VirtualBox 7.0.16
2025-10-07 08:22:14 (182499): Guest Log: CPUID EDX: 0x178bfbff
2025-10-07 08:22:14 (182499): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-07 08:22:14 (182499): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-07 08:22:14 (182499): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-07 08:22:14 (182499): Detected: Web Application Enabled (http://localhost:34057)
2025-10-07 08:22:14 (182499): Detected: Remote Desktop Enabled (localhost:52193)
2025-10-07 08:22:14 (182499): Preference change detected
2025-10-07 08:22:14 (182499): Setting CPU throttle for VM. (100%)
2025-10-07 08:22:15 (182499): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-07 08:22:17 (182499): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-07 08:22:17 (182499): Guest Log: BIOS: Booting from Hard Disk...
2025-10-07 08:22:22 (182499): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-07 08:22:22 (182499): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-07 08:22:22 (182499): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-07 08:22:55 (182499): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-07 08:22:55 (182499): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-07 08:24:24 (182499): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-07 08:24:24 (182499): Guest Log: 00:00:00.001709 main     Log opened 2025-10-07T15:24:22.203980000Z
2025-10-07 08:24:24 (182499): Guest Log: 00:00:00.002861 main     OS Product: Linux
2025-10-07 08:24:24 (182499): Guest Log: 00:00:00.003155 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-07 08:24:24 (182499): Guest Log: 00:00:00.003350 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-07 08:24:24 (182499): Guest Log: 00:00:00.003544 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-07 08:24:24 (182499): Guest Log: 00:00:00.003551 main     Process ID: 1256
2025-10-07 08:24:24 (182499): Guest Log: 00:00:00.003588 main     Package type: LINUX_64BITS_GENERIC
2025-10-07 08:24:24 (182499): Guest Log: 00:00:00.019897 main     5.2.32 r132073 started. Verbose level = 0
2025-10-07 08:24:25 (182499): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-07 08:24:25 (182499): Guest Log: [INFO] Mounting shared directory
2025-10-07 08:24:26 (182499): Guest Log: [INFO] Checking for init_data.xml
2025-10-07 08:25:27 (182499): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-07 08:25:27 (182499): Guest Log: [INFO] Detected branch: prod
2025-10-07 08:25:28 (182499): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-07 08:25:28 (182499): Guest Log: Copying input files
2025-10-07 08:25:39 (182499): Guest Log: Copied input files into RunAtlas.
2025-10-07 08:25:39 (182499): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-07 08:25:39 (182499): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-07 08:25:39 (182499): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-07 08:25:40 (182499): Guest Log: Further information can be found at the LHC@home message board.
2025-10-07 08:25:55 (182499): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-07 08:25:58 (182499): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-07 08:25:58 (182499): Guest Log: 2.6.3.0 1551 0 32256 151440 3 1 3120538 4096000 0 65024 0 0 n/a 1292 803 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-07 08:26:20 (182499): Guest Log: copied the webapp to /var/www
2025-10-07 08:26:21 (182499): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-07 08:26:21 (182499): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-07 08:26:22 (182499): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-07 08:26:22 (182499): Guest Log:  *** Starting ATLAS job. (PandaID=6833168815 taskID=46376905) ***
2025-10-07 09:08:03 (182499): Guest Log:  *** Job finished ***
2025-10-07 09:08:03 (182499): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:47,557 | INFO     | all workflow threads have been joined
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:47,559 | INFO     | end of generic workflow (traces error code: 0)
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:47,563 | INFO     | traces error code: 0
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:47,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:58,396 | INFO     | PID=5976 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:58,410 | INFO     | found 0 job(s) in 20 queues
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:58,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:58,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:58,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:58,419 | INFO     | [monitor] control thread has ended
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:59,593 [wrapper] ==== pilot stdout END ====
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:59,728 [wrapper] ==== wrapper stdout RESUME ====
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:59,807 [wrapper] pilotpid: 5976
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:07:59,882 [wrapper] Pilot exit status: 0
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:08:00,300 [wrapper] pandaids: 6833168815
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:08:00,750 [wrapper] cleanup supervisor_pilot 29299 5977
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:08:00,832 [wrapper] Test setup, not cleaning
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:08:00,913 [wrapper] apfmon messages muted
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:08:00,984 [wrapper] ==== wrapper stdout END ====
2025-10-07 09:08:03 (182499): Guest Log: 2025-10-07 16:08:01,061 [wrapper] ==== wrapper stderr END ====
2025-10-07 09:08:03 (182499): Guest Log:  *** Error codes and diagnostics ***
2025-10-07 09:08:03 (182499): Guest Log:     "exeErrorCode": 65,
2025-10-07 09:08:03 (182499): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-07 09:08:03 (182499): Guest Log:     "pilotErrorCode": 1305,
2025-10-07 09:08:03 (182499): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-07 09:08:03 (182499): Guest Log:  *** Listing of results directory ***
2025-10-07 09:08:03 (182499): Guest Log: total 4856
2025-10-07 09:08:03 (182499): Guest Log: -rw-r--r--. 1 atlas atlas  552446 Oct  7 04:31 pilot3.tar.gz
2025-10-07 09:08:03 (182499): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct  7 04:42 queuedata.json
2025-10-07 09:08:03 (182499): Guest Log: -rwx------. 1 atlas atlas   36292 Oct  7 04:43 runpilot2-wrapper.sh
2025-10-07 09:08:03 (182499): Guest Log: -rw-r--r--. 1 atlas atlas  565598 Oct  7 15:25 input.tar.gz
2025-10-07 09:08:03 (182499): Guest Log: -rw-r--r--. 1 atlas atlas   15120 Oct  7 15:25 start_atlas.sh
2025-10-07 09:08:03 (182499): Guest Log: -rw-r--r--. 1 atlas atlas    6147 Oct  7 15:25 init_data.xml
2025-10-07 09:08:03 (182499): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct  7 15:25 EVNT.46376901._004772.pool.root.1 -> /data/./ATLAS.root_0
2025-10-07 09:08:03 (182499): Guest Log: -rw-r--r--. 1 atlas atlas    2521 Oct  7 15:26 pandaJob.out
2025-10-07 09:08:03 (182499): Guest Log: -rw-------. 1 atlas atlas  977504 Oct  7 15:30 agis_schedconf.cvmfs.json
2025-10-07 09:08:03 (182499): Guest Log: -rw-------. 1 atlas atlas 1560401 Oct  7 15:30 agis_ddmendpoints.agis.ALL.json
2025-10-07 09:08:03 (182499): Guest Log: drwx------. 4 atlas atlas    4096 Oct  7 15:30 pilot3
2025-10-07 09:08:03 (182499): Guest Log: -rw-------. 1 atlas atlas   80358 Oct  7 16:04 log.46376905._128248.job.log.tgz.1
2025-10-07 09:08:03 (182499): Guest Log: -rw-------. 1 atlas atlas    8123 Oct  7 16:07 heartbeat.json
2025-10-07 09:08:03 (182499): Guest Log: -rw-------. 1 atlas atlas      95 Oct  7 16:07 pilot_heartbeat.json
2025-10-07 09:08:03 (182499): Guest Log: -rw-------. 1 atlas atlas     745 Oct  7 16:07 pilotlog.txt
2025-10-07 09:08:03 (182499): Guest Log: -rw-------. 1 atlas atlas  502139 Oct  7 16:08 log.46376905._128248.job.log.1
2025-10-07 09:08:03 (182499): Guest Log: -rw-------. 1 atlas atlas     188 Oct  7 16:08 output.list
2025-10-07 09:08:03 (182499): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct  7 16:08 runtime_log
2025-10-07 09:08:03 (182499): Guest Log: -rw-------. 1 atlas atlas  604160 Oct  7 16:08 result.tar.gz
2025-10-07 09:08:03 (182499): Guest Log: -rw-------. 1 atlas atlas     669 Oct  7 16:08 4kxLDmfiEQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxzKMDmBOtmUo.diag
2025-10-07 09:08:03 (182499): Guest Log: -rw-r--r--. 1 atlas atlas    8538 Oct  7 16:08 runtime_log.err
2025-10-07 09:08:03 (182499): Guest Log: Looking for outputfile HITS.46376905._128248.pool.root.1
2025-10-07 09:08:04 (182499): Guest Log: No HITS file was produced
2025-10-07 09:08:04 (182499): Guest Log: Successfully finished the ATLAS job!
2025-10-07 09:08:04 (182499): Guest Log: Copying the results back to the shared directory!
2025-10-07 09:08:05 (182499): Guest Log:  *** Contents of shared directory: ***
2025-10-07 09:08:05 (182499): Guest Log: total 209452
2025-10-07 09:08:05 (182499): Guest Log: -rw-r--r--. 1 root root 213275524 Oct  7 15:21 ATLAS.root_0
2025-10-07 09:08:05 (182499): Guest Log: -rw-r--r--. 1 root root      6147 Oct  7 15:21 init_data.xml
2025-10-07 09:08:05 (182499): Guest Log: -rw-r--r--. 1 root root    565598 Oct  7 15:21 input.tar.gz
2025-10-07 09:08:05 (182499): Guest Log: -rw-r--r--. 1 root root    604160 Oct  7 16:08 result.tar.gz
2025-10-07 09:08:05 (182499): Guest Log: -rw-r--r--. 1 root root     15120 Oct  7 15:21 start_atlas.sh
2025-10-07 09:08:05 (182499): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-07 09:08:05 (182499): VM Completion File Detected.
2025-10-07 09:08:05 (182499): Powering off VM.
2025-10-07 09:08:07 (182499): Successfully stopped VM.
2025-10-07 09:08:07 (182499): Deregistering VM. (boinc_b4eeba85e13794ee, slot#0)
2025-10-07 09:08:07 (182499): Removing network bandwidth throttle group from VM.
2025-10-07 09:08:08 (182499): Removing VM from VirtualBox.
2025-10-07 09:08:13 (182499): called boinc_finish(0)

</stderr_txt>
]]>

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