Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:44:38 (26633): wrapper (7.7.26015): starting
19:44:38 (26633): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 19:44:38] Arguments: --nthreads 8
[2025-10-07 19:44:38] Threads: 8
[2025-10-07 19:44:38] Checking for CVMFS
[2025-10-07 19:44:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 19:44:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 19:44:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 19:44:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 19:44:40] 2.11.2.0 6199 213721 137764 151442 1 61 17339826 25165824 4632 130560 0 152483661 99.912 63546570 3133 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 19:44:40] CVMFS is ok
[2025-10-07 19:44:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 19:44:40] Checking for apptainer binary...
[2025-10-07 19:44:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 19:44:40] Running /usr/bin/apptainer --version
[2025-10-07 19:44:40] apptainer version 1.3.2-1.el7
[2025-10-07 19:44:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 19:44:45] cg-vwn228.simple-grid.lan
[2025-10-07 19:44:45] apptainer works
[2025-10-07 19:44:45] Set ATHENA_PROC_NUMBER=8
[2025-10-07 19:44:45] Set ATHENA_CORE_NUMBER=8
[2025-10-07 19:44:45] Starting ATLAS job with PandaID=6833168523
[2025-10-07 19:44:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 23:33:56]  *** The last 200 lines of the pilot log: ***
[2025-10-07 23:33:56] 2025-10-07 21:33:04,398 | INFO     | sum of square deviations: 2954447953.0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,405 | INFO     | sum of deviations: 94774779692.99998
[2025-10-07 23:33:56] 2025-10-07 21:33:04,405 | INFO     | mean x: 1759866208.5
[2025-10-07 23:33:56] 2025-10-07 21:33:04,405 | INFO     | mean y: 2404073.613207547
[2025-10-07 23:33:56] 2025-10-07 21:33:04,405 | INFO     | -- intersect: -56451774457.56727
[2025-10-07 23:33:56] 2025-10-07 21:33:04,405 | INFO     | intersect: -56451774457.56727
[2025-10-07 23:33:56] 2025-10-07 21:33:04,406 | INFO     | chi2: 6.559620452374255
[2025-10-07 23:33:56] 2025-10-07 21:33:04,406 | INFO     | sum of square deviations: 2750295288.0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,408 | INFO     | sum of deviations: 106224479022.0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,408 | INFO     | mean x: 1759866056.0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,408 | INFO     | mean y: 2412426.5700483094
[2025-10-07 23:33:56] 2025-10-07 21:33:04,408 | INFO     | -- intersect: -67968781707.65845
[2025-10-07 23:33:56] 2025-10-07 21:33:04,408 | INFO     | intersect: -67968781707.65845
[2025-10-07 23:33:56] 2025-10-07 21:33:04,408 | INFO     | chi2: 5.840106985901206
[2025-10-07 23:33:56] 2025-10-07 21:33:04,409 | INFO     | current chi2=5.840106985901206 (change=10.968827719485228 %)
[2025-10-07 23:33:56] 2025-10-07 21:33:04,409 | INFO     | right removable region: 206
[2025-10-07 23:33:56] 2025-10-07 21:33:04,409 | INFO     | sum of square deviations: 2750295288.0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,411 | INFO     | sum of deviations: 23030605510.000008
[2025-10-07 23:33:56] 2025-10-07 21:33:04,411 | INFO     | mean x: 1759866361.0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,411 | INFO     | mean y: 2457616.2946859905
[2025-10-07 23:33:56] 2025-10-07 21:33:04,411 | INFO     | -- intersect: -14734428305.501747
[2025-10-07 23:33:56] 2025-10-07 21:33:04,411 | INFO     | intersect: -14734428305.501747
[2025-10-07 23:33:56] 2025-10-07 21:33:04,411 | INFO     | chi2: 1.8589632749192793
[2025-10-07 23:33:56] 2025-10-07 21:33:04,412 | INFO     | current chi2=1.8589632749192793 (change=71.66050553662099 %)
[2025-10-07 23:33:56] 2025-10-07 21:33:04,412 | INFO     | sum of square deviations: 2555770710.5
[2025-10-07 23:33:56] 2025-10-07 21:33:04,413 | INFO     | sum of deviations: -6545213746.000001
[2025-10-07 23:33:56] 2025-10-07 21:33:04,414 | INFO     | mean x: 1759866513.5
[2025-10-07 23:33:56] 2025-10-07 21:33:04,414 | INFO     | mean y: 2480600.9801980196
[2025-10-07 23:33:56] 2025-10-07 21:33:04,414 | INFO     | -- intersect: 4509419524.711672
[2025-10-07 23:33:56] 2025-10-07 21:33:04,414 | INFO     | intersect: 4509419524.711672
[2025-10-07 23:33:56] 2025-10-07 21:33:04,414 | INFO     | chi2: 0.8116261069508908
[2025-10-07 23:33:56] 2025-10-07 21:33:04,414 | INFO     | current chi2=0.8116261069508908 (change=56.33985254570811 %)
[2025-10-07 23:33:56] 2025-10-07 21:33:04,415 | INFO     | sum of square deviations: 2370641658.0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,423 | INFO     | sum of deviations: -8753314377.0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,423 | INFO     | mean x: 1759866666.0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,423 | INFO     | mean y: 2482383.6954314723
[2025-10-07 23:33:56] 2025-10-07 21:33:04,423 | INFO     | -- intersect: 6500582228.147274
[2025-10-07 23:33:56] 2025-10-07 21:33:04,423 | INFO     | intersect: 6500582228.147274
[2025-10-07 23:33:56] 2025-10-07 21:33:04,424 | INFO     | chi2: 0.7964940524393005
[2025-10-07 23:33:56] 2025-10-07 21:33:04,424 | INFO     | current chi2=0.7964940524393005 (change=1.8644119973466888 %)
[2025-10-07 23:33:56] 2025-10-07 21:33:04,424 | INFO     | left removable region: 30
[2025-10-07 23:33:56] 2025-10-07 21:33:04,424 | INFO     | sum of square deviations: 1690450300.0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,426 | INFO     | sum of deviations: 2164672626.5000005
[2025-10-07 23:33:56] 2025-10-07 21:33:04,426 | INFO     | mean x: 1759866940.5
[2025-10-07 23:33:56] 2025-10-07 21:33:04,432 | INFO     | mean y: 2495445.6079545454
[2025-10-07 23:33:56] 2025-10-07 21:33:04,433 | INFO     | -- intersect: -2251067284.0284357
[2025-10-07 23:33:56] 2025-10-07 21:33:04,433 | INFO     | intersect: -2251067284.0284357
[2025-10-07 23:33:56] 2025-10-07 21:33:04,433 | INFO     | chi2: 0.0004816236605726913
[2025-10-07 23:33:56] 2025-10-07 21:33:04,433 | INFO     | -- intersect: -2251067284.0284357
[2025-10-07 23:33:56] 2025-10-07 21:33:04,433 | INFO     | current memory leak: 1.28 B/s (using 176 data points, chi2=0.00)
[2025-10-07 23:33:56] 2025-10-07 21:33:04,434 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-07 23:33:56] 2025-10-07 21:33:04,434 | INFO     | ..............................
[2025-10-07 23:33:56] 2025-10-07 21:33:04,434 | INFO     | . Timing measurements:
[2025-10-07 23:33:56] 2025-10-07 21:33:04,434 | INFO     | . get job = 0 s
[2025-10-07 23:33:56] 2025-10-07 21:33:04,435 | INFO     | . initial setup = 5 s
[2025-10-07 23:33:56] 2025-10-07 21:33:04,435 | INFO     | . payload setup = 130 s
[2025-10-07 23:33:56] 2025-10-07 21:33:04,435 | INFO     | . stage-in = 0 s
[2025-10-07 23:33:56] 2025-10-07 21:33:04,435 | INFO     | . payload execution = 13074 s
[2025-10-07 23:33:56] 2025-10-07 21:33:04,435 | INFO     | . stage-out = 7 s
[2025-10-07 23:33:56] 2025-10-07 21:33:04,435 | INFO     | . log creation = 1 s
[2025-10-07 23:33:56] 2025-10-07 21:33:04,435 | INFO     | ..............................
[2025-10-07 23:33:56] 2025-10-07 21:33:04,891 | INFO     | 
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | job summary report
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | --------------------------------------------------
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | PanDA job id: 6833168523
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | task id: 46376905
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | errors: (none)
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | pilot state: finished 
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | transexitcode: 0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | exeerrorcode: 0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | exeerrordiag: 
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | exitcode: 0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,892 | INFO     | exitmsg: OK
[2025-10-07 23:33:56] 2025-10-07 21:33:04,893 | INFO     | cpuconsumptiontime: 49047 s
[2025-10-07 23:33:56] 2025-10-07 21:33:04,893 | INFO     | nevents: 400
[2025-10-07 23:33:56] 2025-10-07 21:33:04,893 | INFO     | neventsw: 0
[2025-10-07 23:33:56] 2025-10-07 21:33:04,893 | INFO     | pid: 4549
[2025-10-07 23:33:56] 2025-10-07 21:33:04,893 | INFO     | pgrp: 4549
[2025-10-07 23:33:56] 2025-10-07 21:33:04,893 | INFO     | corecount: 8
[2025-10-07 23:33:56] 2025-10-07 21:33:04,893 | INFO     | event service: False
[2025-10-07 23:33:56] 2025-10-07 21:33:04,893 | INFO     | sizes: {0: 2348650, 1: 2348849, 12: 2348849, 23: 2348877, 33: 2348905, 44: 2348961, 55: 2349117, 66: 2349145, 76: 2349173, 86: 2349491, 87: 2349519, 13209: 2379440
[2025-10-07 23:33:56] 2025-10-07 21:33:04,893 | INFO     | --------------------------------------------------
[2025-10-07 23:33:56] 2025-10-07 21:33:04,893 | INFO     | 
[2025-10-07 23:33:56] 2025-10-07 21:33:04,894 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-10-07 23:33:56] 2025-10-07 21:33:05,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,461 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,461 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,463 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 23:33:56] 2025-10-07 21:33:05,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,463 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 23:33:56] 2025-10-07 21:33:05,463 | INFO     | job 6833168523 has completed (purged errors)
[2025-10-07 23:33:56] 2025-10-07 21:33:05,463 | INFO     | overall cleanup function is called
[2025-10-07 23:33:56] 2025-10-07 21:33:06,473 | INFO     | --- collectZombieJob: --- 10, [4549]
[2025-10-07 23:33:56] 2025-10-07 21:33:06,473 | INFO     | zombie collector waiting for pid 4549
[2025-10-07 23:33:56] 2025-10-07 21:33:06,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 23:33:56] 2025-10-07 21:33:06,474 | INFO     | collected zombie processes
[2025-10-07 23:33:56] 2025-10-07 21:33:06,474 | INFO     | will attempt to kill all subprocesses of pid=4549
[2025-10-07 23:33:56] 2025-10-07 21:33:06,623 | INFO     | process IDs to be killed: [4549] (in reverse order)
[2025-10-07 23:33:56] 2025-10-07 21:33:07,322 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 23:33:56] 2025-10-07 21:33:07,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 23:33:56] 2025-10-07 21:33:07,326 | INFO     | did not find any defunct processes belonging to 4549
[2025-10-07 23:33:56] 2025-10-07 21:33:07,329 | INFO     | did not find any defunct processes belonging to 4549
[2025-10-07 23:33:56] 2025-10-07 21:33:07,332 | INFO     | ready for new job
[2025-10-07 23:33:56] 2025-10-07 21:33:07,333 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 23:33:56] 2025-10-07 21:33:08,252 | INFO     | ***************************************
[2025-10-07 23:33:56] 2025-10-07 21:33:08,252 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 23:33:56] 2025-10-07 21:33:08,252 | INFO     | ***************************************
[2025-10-07 23:33:56] 2025-10-07 21:33:08,253 | INFO     | 
[2025-10-07 23:33:56] 2025-10-07 21:33:08,253 | INFO     | pilot is running in a VM
[2025-10-07 23:33:56] 2025-10-07 21:33:08,253 | INFO     | architecture information:
[2025-10-07 23:33:56] 2025-10-07 21:33:08,262 | INFO     | executing command: cat /etc/os-release
[2025-10-07 23:33:56] 2025-10-07 21:33:08,541 | INFO     | cat /etc/os-release:
[2025-10-07 23:33:56] NAME="CentOS Linux"
[2025-10-07 23:33:56] VERSION="7 (Core)"
[2025-10-07 23:33:56] ID="centos"
[2025-10-07 23:33:56] ID_LIKE="rhel fedora"
[2025-10-07 23:33:56] VERSION_ID="7"
[2025-10-07 23:33:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 23:33:56] ANSI_COLOR="0;31"
[2025-10-07 23:33:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 23:33:56] HOME_URL="https://www.centos.org/"
[2025-10-07 23:33:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 23:33:56] 
[2025-10-07 23:33:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 23:33:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 23:33:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 23:33:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 23:33:56] 
[2025-10-07 23:33:56] 2025-10-07 21:33:08,541 | INFO     | ***************************************
[2025-10-07 23:33:56] 2025-10-07 21:33:09,045 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-10-07 23:33:56] 2025-10-07 21:33:09,273 | INFO     | sufficient remaining disk space (495614689280 B)
[2025-10-07 23:33:56] 2025-10-07 21:33:09,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 23:33:56] 2025-10-07 21:33:09,273 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 23:33:56] 2025-10-07 21:33:09,274 | INFO     | update_server=False
[2025-10-07 23:33:56] 2025-10-07 21:33:09,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 23:33:56] 2025-10-07 21:33:09,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 23:33:56] 2025-10-07 21:33:09,395 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 23:33:56] 2025-10-07 21:33:09,395 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 23:33:56] 2025-10-07 21:33:09,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 23:33:56] 2025-10-07 21:33:09,396 | INFO     | will abort loop
[2025-10-07 23:33:56] 2025-10-07 21:33:09,493 | INFO     | all payload control threads have been joined
[2025-10-07 23:33:56] 2025-10-07 21:33:09,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 23:33:56] 2025-10-07 21:33:10,279 | INFO     | [job] retrieve thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:10,300 | INFO     | all data control threads have been joined
[2025-10-07 23:33:56] 2025-10-07 21:33:10,401 | INFO     | [job] job monitor thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:10,473 | INFO     | [data] copytool_in thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:10,476 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:10,499 | INFO     | [payload] control thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:10,575 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:10,615 | INFO     | [payload] failed_post thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:10,617 | INFO     | [job] queue monitor thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:10,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 23:33:56] 2025-10-07 21:33:10,796 | INFO     | [job] validate thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:10,808 | INFO     | all job control threads have been joined
[2025-10-07 23:33:56] 2025-10-07 21:33:10,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:11,305 | INFO     | [data] control thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:11,360 | INFO     | [payload] validate_post thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:11,687 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:11,814 | INFO     | [job] control thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:12,711 | INFO     | [data] copytool_out thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:13,283 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 23:33:56] 2025-10-07 21:33:21,974 [wrapper] supervise_pilot (15 min periods counter: 16)
[2025-10-07 23:33:56] 2025-10-07 21:33:37,459 | INFO     | PID=30396 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 23:33:56] 2025-10-07 21:33:37,460 | INFO     | .. there are 9 such processes running
[2025-10-07 23:33:56] 2025-10-07 21:33:37,460 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 23:33:56] 2025-10-07 21:33:37,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 23:33:56] 2025-10-07 21:33:37,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 23:33:56] 2025-10-07 21:33:46,178 | INFO     | [monitor] cgroup control has ended
[2025-10-07 23:33:56] 2025-10-07 21:33:46,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710014543680)>', '<ExcThread(monitor, started 140709411669760)>']
[2025-10-07 23:33:56] 2025-10-07 21:33:46,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 23:33:56] 2025-10-07 21:33:46,514 | INFO     | [monitor] control thread has ended
[2025-10-07 23:33:56] 2025-10-07 21:33:51,264 | INFO     | all workflow threads have been joined
[2025-10-07 23:33:56] 2025-10-07 21:33:51,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 23:33:56] 2025-10-07 21:33:51,265 | INFO     | traces error code: 0
[2025-10-07 23:33:56] 2025-10-07 21:33:51,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 23:33:56] 2025-10-07 21:33:51,738 [wrapper] ==== pilot stdout END ====
[2025-10-07 23:33:56] 2025-10-07 21:33:51,792 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 23:33:56] 2025-10-07 21:33:51,875 [wrapper] pilotpid: 30396
[2025-10-07 23:33:56] 2025-10-07 21:33:51,965 [wrapper] Pilot exit status: 0
[2025-10-07 23:33:56] 2025-10-07 21:33:52,436 [wrapper] pandaids: 6833168523
[2025-10-07 23:33:56] 2025-10-07 21:33:53,457 [wrapper] cleanup supervisor_pilot 30880 30397
[2025-10-07 23:33:56] 2025-10-07 21:33:53,597 [wrapper] Test setup, not cleaning
[2025-10-07 23:33:56] 2025-10-07 21:33:53,664 [wrapper] apfmon messages muted
[2025-10-07 23:33:56] 2025-10-07 21:33:53,743 [wrapper] ==== wrapper stdout END ====
[2025-10-07 23:33:56] 2025-10-07 21:33:53,840 [wrapper] ==== wrapper stderr END ====
[2025-10-07 23:33:56]  *** Error codes and diagnostics ***
[2025-10-07 23:33:56]     "exeErrorCode": 0,
[2025-10-07 23:33:56]     "exeErrorDiag": "",
[2025-10-07 23:33:56]     "pilotErrorCode": 0,
[2025-10-07 23:33:56]     "pilotErrorDiag": "",
[2025-10-07 23:33:56]  *** Listing of results directory ***
[2025-10-07 23:33:56] total 397304
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc    552446 Oct  7 06:31 pilot3.tar.gz
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc      5112 Oct  7 06:34 queuedata.json
[2025-10-07 23:33:56] -rwx------. 1 boinc boinc     36292 Oct  7 06:38 runpilot2-wrapper.sh
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc       100 Oct  7 19:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 23:33:56] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 19:44 run_atlas
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc       105 Oct  7 19:44 job.xml
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc      6391 Oct  7 19:44 init_data.xml
[2025-10-07 23:33:56] -rw-r--r--. 2 boinc boinc 218791503 Oct  7 19:44 EVNT.46376901._004770.pool.root.1
[2025-10-07 23:33:56] -rw-r--r--. 2 boinc boinc     15120 Oct  7 19:44 start_atlas.sh
[2025-10-07 23:33:56] drwxrwx--x. 2 boinc boinc        68 Oct  7 19:44 shared
[2025-10-07 23:33:56] -rw-r--r--. 2 boinc boinc    565604 Oct  7 19:44 input.tar.gz
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc         0 Oct  7 19:44 boinc_lockfile
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc      2521 Oct  7 19:44 pandaJob.out
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc    977520 Oct  7 19:48 agis_schedconf.cvmfs.json
[2025-10-07 23:33:56] drwx------. 4 boinc boinc      4096 Oct  7 19:48 pilot3
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc 179645013 Oct  7 23:30 HITS.46376905._128208.pool.root.1
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc       531 Oct  7 23:30 boinc_task_state.xml
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc      1014 Oct  7 23:31 memory_monitor_summary.json
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc   1560401 Oct  7 23:31 agis_ddmendpoints.agis.ALL.json
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc    454990 Oct  7 23:31 log.46376905._128208.job.log.tgz.1
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc        95 Oct  7 23:32 pilot_heartbeat.json
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc      7778 Oct  7 23:33 heartbeat.json
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc        28 Oct  7 23:33 wrapper_checkpoint.txt
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc      8192 Oct  7 23:33 boinc_mmap_file
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc      5071 Oct  7 23:33 pilotlog.txt
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc   1807208 Oct  7 23:33 log.46376905._128208.job.log.1
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc       357 Oct  7 23:33 output.list
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc       620 Oct  7 23:33 runtime_log
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc   2283520 Oct  7 23:33 result.tar.gz
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc      8717 Oct  7 23:33 runtime_log.err
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc       657 Oct  7 23:33 EpqKDmbeEQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmczKMDmK5VVGm.diag
[2025-10-07 23:33:56] -rw-r--r--. 1 boinc boinc     20657 Oct  7 23:33 stderr.txt
[2025-10-07 23:33:56] HITS file was successfully produced:
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc 179645013 Oct  7 23:30 shared/HITS.pool.root.1
[2025-10-07 23:33:56]  *** Contents of shared directory: ***
[2025-10-07 23:33:56] total 391904
[2025-10-07 23:33:56] -rw-r--r--. 2 boinc boinc 218791503 Oct  7 19:44 ATLAS.root_0
[2025-10-07 23:33:56] -rw-r--r--. 2 boinc boinc     15120 Oct  7 19:44 start_atlas.sh
[2025-10-07 23:33:56] -rw-r--r--. 2 boinc boinc    565604 Oct  7 19:44 input.tar.gz
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc 179645013 Oct  7 23:30 HITS.pool.root.1
[2025-10-07 23:33:56] -rw-------. 1 boinc boinc   2283520 Oct  7 23:33 result.tar.gz
23:33:58 (26633): run_atlas exited; CPU time 49236.294788
23:33:58 (26633): called boinc_finish(0)

</stderr_txt>
]]>

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