Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:04:25 (1632797): wrapper (7.7.26015): starting
05:04:25 (1632797): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 05:04:25] Arguments: --nthreads 8
[2025-10-07 05:04:25] Threads: 8
[2025-10-07 05:04:25] Checking for CVMFS
[2025-10-07 05:04:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 05:04:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 05:04:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 05:04:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 05:04:27] 2.13.2.0 3683012 5383 140452 151430 2 576 34154487 40960001 51295 16776704 0 62856342 99.825 31577172 33536 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-07 05:04:27] CVMFS is ok
[2025-10-07 05:04:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 05:04:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 05:04:27] Further information can be found at the LHC@home message board.
[2025-10-07 05:04:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 05:04:27] Checking for apptainer binary...
[2025-10-07 05:04:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 05:04:27] Running /usr/bin/apptainer --version
[2025-10-07 05:04:27] apptainer version 1.4.2-1.el9
[2025-10-07 05:04:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 05:04:28] c8-7-4.aglt2.org
[2025-10-07 05:04:28] apptainer works
[2025-10-07 05:04:28] Set ATHENA_PROC_NUMBER=8
[2025-10-07 05:04:28] Set ATHENA_CORE_NUMBER=8
[2025-10-07 05:04:28] Starting ATLAS job with PandaID=6833159900
[2025-10-07 05:04:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 06:45:31]  *** The last 200 lines of the pilot log: ***
[2025-10-07 06:45:31] 2025-10-07 10:44:27,106 | INFO     | time since job start (5915s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:27,388 | INFO     | monitor loop #370: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:27,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:29,116 | INFO     | time since job start (5917s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:29,894 | INFO     | monitor loop #371: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:29,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:31,166 | INFO     | time since job start (5919s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:32,399 | INFO     | monitor loop #372: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:32,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:33,176 | INFO     | time since job start (5921s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:34,948 | INFO     | monitor loop #373: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:34,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:35,202 | INFO     | time since job start (5923s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:37,209 | INFO     | time since job start (5925s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:37,453 | INFO     | monitor loop #374: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:37,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:39,238 | INFO     | time since job start (5927s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:39,960 | INFO     | monitor loop #375: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:39,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:42,468 | INFO     | monitor loop #376: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:42,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:42,804 | INFO     | PID=1660378 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 06:45:31] 2025-10-07 10:44:42,804 | INFO     | .. there are 74 such processes running
[2025-10-07 06:45:31] 2025-10-07 10:44:43,804 | INFO     | time since job start (5931s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:45,029 | INFO     | monitor loop #377: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:45,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:45,811 | INFO     | time since job start (5933s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:47,536 | INFO     | monitor loop #378: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:47,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:47,818 | INFO     | time since job start (5935s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:49,833 | INFO     | time since job start (5937s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:50,046 | INFO     | monitor loop #379: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:50,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:51,850 | INFO     | time since job start (5939s) is within the limit (172800.0s)
[2025-10-07 06:45:31] 2025-10-07 10:44:52,523 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 06:45:31] 2025-10-07 10:44:52,532 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.18651562499
[2025-10-07 06:45:31] 2025-10-07 10:44:52,550 | INFO     | monitor loop #380: job 0:6833159900 is in state 'finished'
[2025-10-07 06:45:31] 2025-10-07 10:44:52,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:45:31] 2025-10-07 10:44:52,574 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6833159900/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 06:45:31] 2025-10-07 10:44:52,574 | INFO     | extracted standard info from prmon json
[2025-10-07 06:45:31] 2025-10-07 10:44:52,574 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 06:45:31] 2025-10-07 10:44:52,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 06:45:31] 2025-10-07 10:44:52,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 06:45:31] 2025-10-07 10:44:52,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 06:45:31] 2025-10-07 10:44:52,580 | INFO     | fitting pss+swap vs Time
[2025-10-07 06:45:31] 2025-10-07 10:44:52,580 | INFO     | sum of square deviations: 204163588.71264383
[2025-10-07 06:45:31] 2025-10-07 10:44:52,580 | INFO     | sum of deviations: 4542704197.540229
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | mean x: 1759831055.0574713
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | mean y: 2377776.091954023
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | -- intersect: -39154417865.97119
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | intersect: -39154417865.97119
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | chi2: 0.2664137176433785
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | -- intersect: -39154417865.97119
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | current memory leak: 22.25 B/s (using 87 data points, chi2=0.27)
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | ..............................
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | . Timing measurements:
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | . get job = 0 s
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | . initial setup = 6 s
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | . payload setup = 53 s
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | . stage-in = 0 s
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | . payload execution = 5755 s
[2025-10-07 06:45:31] 2025-10-07 10:44:52,581 | INFO     | . stage-out = 3 s
[2025-10-07 06:45:31] 2025-10-07 10:44:52,582 | INFO     | . log creation = 0 s
[2025-10-07 06:45:31] 2025-10-07 10:44:52,582 | INFO     | ..............................
[2025-10-07 06:45:31] 2025-10-07 10:44:52,756 | INFO     | 
[2025-10-07 06:45:31] 2025-10-07 10:44:52,756 | INFO     | job summary report
[2025-10-07 06:45:31] 2025-10-07 10:44:52,756 | INFO     | --------------------------------------------------
[2025-10-07 06:45:31] 2025-10-07 10:44:52,756 | INFO     | PanDA job id: 6833159900
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | task id: 46376905
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | errors: (none)
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | pilot state: finished 
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | transexitcode: 0
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | exeerrorcode: 0
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | exeerrordiag: 
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | exitcode: 0
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | exitmsg: OK
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | cpuconsumptiontime: 20057 s
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | nevents: 400
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | neventsw: 0
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | pid: 1711604
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | pgrp: 1711604
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | corecount: 8
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | event service: False
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | sizes: {0: 2348647, 1: 2348846, 12: 2348846, 22: 2348874, 33: 2348902, 38: 2349220, 44: 2349376, 5813: 2375990, 5814: 2375989, 5818: 2385043, 5820: 2385127, 5860: 
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | --------------------------------------------------
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | 
[2025-10-07 06:45:31] 2025-10-07 10:44:52,757 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-07 06:45:31] 2025-10-07 10:44:52,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | job 6833159900 has completed (purged errors)
[2025-10-07 06:45:31] 2025-10-07 10:44:52,854 | INFO     | overall cleanup function is called
[2025-10-07 06:45:31] 2025-10-07 10:44:53,862 | INFO     | --- collectZombieJob: --- 10, [1711604]
[2025-10-07 06:45:31] 2025-10-07 10:44:53,862 | INFO     | zombie collector waiting for pid 1711604
[2025-10-07 06:45:31] 2025-10-07 10:44:53,862 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 06:45:31] 2025-10-07 10:44:53,863 | INFO     | collected zombie processes
[2025-10-07 06:45:31] 2025-10-07 10:44:53,863 | INFO     | will attempt to kill all subprocesses of pid=1711604
[2025-10-07 06:45:31] 2025-10-07 10:44:56,389 | INFO     | process IDs to be killed: [1711604] (in reverse order)
[2025-10-07 06:45:31] 2025-10-07 10:44:58,165 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 06:45:31] 2025-10-07 10:44:58,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 06:45:31] 2025-10-07 10:44:58,279 | INFO     | did not find any defunct processes belonging to 1711604
[2025-10-07 06:45:31] 2025-10-07 10:44:58,541 | INFO     | did not find any defunct processes belonging to 1711604
[2025-10-07 06:45:31] 2025-10-07 10:44:58,542 | INFO     | ready for new job
[2025-10-07 06:45:31] 2025-10-07 10:44:58,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 06:45:31] 2025-10-07 10:44:58,543 | INFO     | ***************************************
[2025-10-07 06:45:31] 2025-10-07 10:44:58,543 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 06:45:31] 2025-10-07 10:44:58,543 | INFO     | ***************************************
[2025-10-07 06:45:31] 2025-10-07 10:44:58,543 | INFO     | 
[2025-10-07 06:45:31] 2025-10-07 10:44:58,610 | INFO     | architecture information:
[2025-10-07 06:45:31] 2025-10-07 10:44:58,767 | INFO     | executing command: cat /etc/os-release
[2025-10-07 06:45:31] 2025-10-07 10:44:58,882 | INFO     | cat /etc/os-release:
[2025-10-07 06:45:31] NAME="CentOS Linux"
[2025-10-07 06:45:31] VERSION="7 (Core)"
[2025-10-07 06:45:31] ID="centos"
[2025-10-07 06:45:31] ID_LIKE="rhel fedora"
[2025-10-07 06:45:31] VERSION_ID="7"
[2025-10-07 06:45:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 06:45:31] ANSI_COLOR="0;31"
[2025-10-07 06:45:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 06:45:31] HOME_URL="https://www.centos.org/"
[2025-10-07 06:45:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 06:45:31] 
[2025-10-07 06:45:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 06:45:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 06:45:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 06:45:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 06:45:31] 
[2025-10-07 06:45:31] 2025-10-07 10:44:58,882 | INFO     | ***************************************
[2025-10-07 06:45:31] 2025-10-07 10:44:59,385 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-07 06:45:31] 2025-10-07 10:44:59,453 | INFO     | sufficient remaining disk space (169175154688 B)
[2025-10-07 06:45:31] 2025-10-07 10:44:59,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 06:45:31] 2025-10-07 10:44:59,453 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 06:45:31] 2025-10-07 10:44:59,453 | INFO     | update_server=False
[2025-10-07 06:45:31] 2025-10-07 10:44:59,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 06:45:31] 2025-10-07 10:44:59,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 06:45:31] 2025-10-07 10:44:59,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 06:45:31] 2025-10-07 10:44:59,454 | INFO     | aborting loop
[2025-10-07 06:45:31] 2025-10-07 10:44:59,549 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 06:45:31] 2025-10-07 10:44:59,706 | INFO     | all payload control threads have been joined
[2025-10-07 06:45:31] 2025-10-07 10:45:00,010 | INFO     | all job control threads have been joined
[2025-10-07 06:45:31] 2025-10-07 10:45:00,387 | INFO     | all data control threads have been joined
[2025-10-07 06:45:31] 2025-10-07 10:45:00,459 | INFO     | [job] retrieve thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:00,469 | INFO     | [job] job monitor thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:00,712 | INFO     | [payload] control thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:00,777 | INFO     | [data] copytool_in thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:00,934 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:01,016 | INFO     | [job] control thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:01,100 | INFO     | [job] validate thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:01,105 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:01,393 | INFO     | [data] control thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:01,475 | INFO     | [data] copytool_out thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:01,618 | INFO     | [payload] failed_post thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:01,712 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:01,807 | INFO     | [payload] validate_post thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:01,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 06:45:31] 2025-10-07 10:45:01,909 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:01,952 | INFO     | [monitor] cgroup control has ended
[2025-10-07 06:45:31] 2025-10-07 10:45:02,900 | INFO     | [job] queue monitor thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:03,569 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 06:45:31] 2025-10-07 10:45:04,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673251407680)>', '<ExcThread(monitor, started 139672462288640)>']
[2025-10-07 06:45:31] 2025-10-07 10:45:09,496 | INFO     | all workflow threads have been joined
[2025-10-07 06:45:31] 2025-10-07 10:45:09,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 06:45:31] 2025-10-07 10:45:09,497 | INFO     | traces error code: 0
[2025-10-07 06:45:31] 2025-10-07 10:45:09,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 06:45:31] 2025-10-07 10:45:29,784 | INFO     | PID=1660378 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 06:45:31] 2025-10-07 10:45:29,784 | INFO     | .. there are 74 such processes running
[2025-10-07 06:45:31] 2025-10-07 10:45:29,784 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 06:45:31] 2025-10-07 10:45:29,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 06:45:31] 2025-10-07 10:45:29,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 06:45:31] 2025-10-07 10:45:29,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 06:45:31] 2025-10-07 10:45:29,785 | INFO     | [monitor] control thread has ended
[2025-10-07 06:45:31] 2025-10-07 10:45:30,003 [wrapper] ==== pilot stdout END ====
[2025-10-07 06:45:31] 2025-10-07 10:45:30,062 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 06:45:31] 2025-10-07 10:45:30,076 [wrapper] pilotpid: 1660378
[2025-10-07 06:45:31] 2025-10-07 10:45:30,100 [wrapper] Pilot exit status: 0
[2025-10-07 06:45:31] 2025-10-07 10:45:30,211 [wrapper] pandaids: 6833159900
[2025-10-07 06:45:31] 2025-10-07 10:45:30,482 [wrapper] cleanup supervisor_pilot 2783818 1660379
[2025-10-07 06:45:31] 2025-10-07 10:45:30,510 [wrapper] Test setup, not cleaning
[2025-10-07 06:45:31] 2025-10-07 10:45:30,526 [wrapper] apfmon messages muted
[2025-10-07 06:45:31] 2025-10-07 10:45:30,563 [wrapper] ==== wrapper stdout END ====
[2025-10-07 06:45:31] 2025-10-07 10:45:30,583 [wrapper] ==== wrapper stderr END ====
[2025-10-07 06:45:31]  *** Error codes and diagnostics ***
[2025-10-07 06:45:31]     "exeErrorCode": 0,
[2025-10-07 06:45:31]     "exeErrorDiag": "",
[2025-10-07 06:45:31]     "pilotErrorCode": 0,
[2025-10-07 06:45:31]     "pilotErrorDiag": "",
[2025-10-07 06:45:31]  *** Listing of results directory ***
[2025-10-07 06:45:31] total 392940
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 20:56 pilot3.tar.gz
[2025-10-07 06:45:31] -rwx------. 1 boincer umatlas     36292 Oct  6 21:03 runpilot2-wrapper.sh
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 21:03 queuedata.json
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas       100 Oct  7 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 06:45:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  7 05:04 run_atlas
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas       105 Oct  7 05:04 job.xml
[2025-10-07 06:45:31] -rw-r--r--. 2 boincer umatlas 215915220 Oct  7 05:04 EVNT.46376901._004618.pool.root.1
[2025-10-07 06:45:31] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 05:04 start_atlas.sh
[2025-10-07 06:45:31] drwxrwx--x. 2 boincer umatlas      4096 Oct  7 05:04 shared
[2025-10-07 06:45:31] -rw-r--r--. 2 boincer umatlas    565594 Oct  7 05:04 input.tar.gz
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas         0 Oct  7 05:04 boinc_lockfile
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas      2520 Oct  7 05:04 pandaJob.out
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas    974984 Oct  7 05:05 agis_schedconf.cvmfs.json
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas   1560401 Oct  7 05:05 agis_ddmendpoints.agis.ALL.json
[2025-10-07 06:45:31] drwx------. 4 boincer umatlas      4096 Oct  7 05:05 pilot3
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas      7160 Oct  7 06:38 init_data.xml
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas 180410730 Oct  7 06:43 HITS.46376905._124380.pool.root.1
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas       530 Oct  7 06:43 boinc_task_state.xml
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas      1035 Oct  7 06:44 memory_monitor_summary.json
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas    324786 Oct  7 06:44 log.46376905._124380.job.log.tgz.1
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas      7783 Oct  7 06:44 heartbeat.json
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas        95 Oct  7 06:44 pilot_heartbeat.json
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas      8192 Oct  7 06:45 boinc_mmap_file
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas        27 Oct  7 06:45 wrapper_checkpoint.txt
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas       823 Oct  7 06:45 pilotlog.txt
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas    754732 Oct  7 06:45 log.46376905._124380.job.log.1
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas       357 Oct  7 06:45 output.list
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas       620 Oct  7 06:45 runtime_log
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas   1095680 Oct  7 06:45 result.tar.gz
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas      8693 Oct  7 06:45 runtime_log.err
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas       651 Oct  7 06:45 KqzKDmTIBQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXaKMDmjDUX0n.diag
[2025-10-07 06:45:31] -rw-r--r--. 1 boincer umatlas     22379 Oct  7 06:45 stderr.txt
[2025-10-07 06:45:31] HITS file was successfully produced:
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas 180410730 Oct  7 06:43 shared/HITS.pool.root.1
[2025-10-07 06:45:31]  *** Contents of shared directory: ***
[2025-10-07 06:45:31] total 388692
[2025-10-07 06:45:31] -rw-r--r--. 2 boincer umatlas 215915220 Oct  7 05:04 ATLAS.root_0
[2025-10-07 06:45:31] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 05:04 start_atlas.sh
[2025-10-07 06:45:31] -rw-r--r--. 2 boincer umatlas    565594 Oct  7 05:04 input.tar.gz
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas 180410730 Oct  7 06:43 HITS.pool.root.1
[2025-10-07 06:45:31] -rw-------. 1 boincer umatlas   1095680 Oct  7 06:45 result.tar.gz
06:45:32 (1632797): run_atlas exited; CPU time 20245.139365
06:45:32 (1632797): called boinc_finish(0)

</stderr_txt>
]]>

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