Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
06:05:03 (906551): wrapper (7.7.26015): starting
06:05:03 (906551): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 06:05:03] Arguments: --nthreads 12
[2025-10-07 06:05:03] Threads: 12
[2025-10-07 06:05:03] Checking for CVMFS
[2025-10-07 06:05:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 06:05:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 06:05:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 06:05:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 06:05:03] 2.13.2.0 193085 6253 54912 151434 1 188 16327403 16777216 0 130560 0 23760021 99.998 210324 1239 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-07 06:05:03] CVMFS is ok
[2025-10-07 06:05:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 06:05:03] Checking for apptainer binary...
[2025-10-07 06:05:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 06:05:03] Running /usr/bin/apptainer --version
[2025-10-07 06:05:03] apptainer version 1.3.0-bp160.1.36
[2025-10-07 06:05:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 06:05:04] boinc-runner
[2025-10-07 06:05:04] apptainer works
[2025-10-07 06:05:04] Set ATHENA_PROC_NUMBER=12
[2025-10-07 06:05:04] Set ATHENA_CORE_NUMBER=12
[2025-10-07 06:05:04] Starting ATLAS job with PandaID=6833160129
[2025-10-07 06:05:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 06:32:18]  *** The last 200 lines of the pilot log: ***
[2025-10-07 06:32:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-07 06:32:18]  replicas=None
[2025-10-07 06:32:18]  scope=mc23_13p6TeV
[2025-10-07 06:32:18]  status=None
[2025-10-07 06:32:18]  status_code=0
[2025-10-07 06:32:18]  storage_token=
[2025-10-07 06:32:18]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6833160129/log.46376905._124609.job.log.tgz.1
[2025-10-07 06:32:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/05/log.46376905._124609.job.log.tgz.1
[2025-10-07 06:32:18]  workdir=None
[2025-10-07 06:32:18] ]
[2025-10-07 06:32:18] 2025-10-07 11:31:10,661 | INFO     | transferring file log.46376905._124609.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6833160129/log.46376905._124609.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-07 06:32:18] 2025-10-07 11:31:10,661 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6833160129/log.46376905._124609.job.log.tgz.1 /var/lib/boinc/slots/0/log.46376905._124609.job
[2025-10-07 06:32:18] 2025-10-07 11:31:10,669 | INFO     | adding to output.list: log.46376905._124609.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/05/log.46376905._124609.job.log.tg
[2025-10-07 06:32:18] 2025-10-07 11:31:10,670 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 06:32:18] 2025-10-07 11:31:10,670 | INFO     | summary of transferred files:
[2025-10-07 06:32:18] 2025-10-07 11:31:10,670 | INFO     |  -- lfn=log.46376905._124609.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 06:32:18] 2025-10-07 11:31:10,670 | INFO     | stage-out finished correctly
[2025-10-07 06:32:18] 2025-10-07 11:31:10,707 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 06:32:18] 2025-10-07 11:31:10,741 | INFO     | job 6833160129 has state=finished
[2025-10-07 06:32:18] 2025-10-07 11:31:10,742 | INFO     | preparing for final server update for job 6833160129 in state='finished'
[2025-10-07 06:32:18] 2025-10-07 11:31:10,742 | INFO     | this job has now completed (state=finished)
[2025-10-07 06:32:18] 2025-10-07 11:31:10,742 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 06:32:18] 2025-10-07 11:31:10,742 | INFO     | log transfer has been attempted: DONE
[2025-10-07 06:32:18] 2025-10-07 11:31:10,742 | INFO     | job 6833160129 has finished - writing final server update
[2025-10-07 06:32:18] 2025-10-07 11:31:10,742 | INFO     | total number of processed events: 400 (read)
[2025-10-07 06:32:18] 2025-10-07 11:31:10,743 | INFO     | executing command: lscpu
[2025-10-07 06:32:18] 2025-10-07 11:31:10,762 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 06:32:18] 2025-10-07 11:31:11,430 | INFO     | time since job start (1561s) is within the limit (172800.0s)
[2025-10-07 06:32:18] 2025-10-07 11:31:12,095 | INFO     | monitor loop #123: job 0:6833160129 is in state 'finished'
[2025-10-07 06:32:18] 2025-10-07 11:31:12,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:32:18] 2025-10-07 11:31:13,434 | INFO     | time since job start (1563s) is within the limit (172800.0s)
[2025-10-07 06:32:18] 2025-10-07 11:31:14,598 | INFO     | monitor loop #124: job 0:6833160129 is in state 'finished'
[2025-10-07 06:32:18] 2025-10-07 11:31:14,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:32:18] 2025-10-07 11:31:15,063 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 06:32:18] 2025-10-07 11:31:15,066 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4241.00746875
[2025-10-07 06:32:18] 2025-10-07 11:31:15,069 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6833160129/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 06:32:18] 2025-10-07 11:31:15,069 | INFO     | extracted standard info from prmon json
[2025-10-07 06:32:18] 2025-10-07 11:31:15,070 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 06:32:18] 2025-10-07 11:31:15,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 06:32:18] 2025-10-07 11:31:15,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 06:32:18] 2025-10-07 11:31:15,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 06:32:18] 2025-10-07 11:31:15,070 | INFO     | fitting pss+swap vs Time
[2025-10-07 06:32:18] 2025-10-07 11:31:15,070 | INFO     | sum of square deviations: 2120970.0
[2025-10-07 06:32:18] 2025-10-07 11:31:15,070 | INFO     | sum of deviations: -225388656.0
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | mean x: 1759835981.0
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | mean y: 2957284.789473684
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | -- intersect: 187015063320.25037
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | intersect: 187015063320.25037
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | chi2: 0.008299894664248877
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | -- intersect: 187015063320.25037
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | current memory leak: -106.27 B/s (using 19 data points, chi2=0.01)
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | could have reported an average CPU frequency of 4231 MHz (4 samples)
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | ..............................
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | . Timing measurements:
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | . get job = 0 s
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | . initial setup = 3 s
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | . payload setup = 2 s
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | . stage-in = 0 s
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | . payload execution = 1540 s
[2025-10-07 06:32:18] 2025-10-07 11:31:15,071 | INFO     | . stage-out = 0 s
[2025-10-07 06:32:18] 2025-10-07 11:31:15,072 | INFO     | . log creation = 0 s
[2025-10-07 06:32:18] 2025-10-07 11:31:15,072 | INFO     | ..............................
[2025-10-07 06:32:18] 2025-10-07 11:31:15,117 | INFO     | 
[2025-10-07 06:32:18] 2025-10-07 11:31:15,117 | INFO     | job summary report
[2025-10-07 06:32:18] 2025-10-07 11:31:15,117 | INFO     | --------------------------------------------------
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | PanDA job id: 6833160129
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | task id: 46376905
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | errors: (none)
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | pilot state: finished 
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | transexitcode: 0
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | exeerrorcode: 0
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | exeerrordiag: 
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | exitcode: 0
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | exitmsg: OK
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | cpuconsumptiontime: 15970 s
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | nevents: 400
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | neventsw: 0
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | pid: 917320
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | pgrp: 917320
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | corecount: 12
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | event service: False
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | sizes: {0: 2348655, 1: 2348769, 2: 2349059, 11: 2349087, 1546: 2373902, 1548: 2383084, 1552: 2383222}
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | --------------------------------------------------
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | 
[2025-10-07 06:32:18] 2025-10-07 11:31:15,118 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-07 06:32:18] 2025-10-07 11:31:15,129 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,129 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,129 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | job 6833160129 has completed (purged errors)
[2025-10-07 06:32:18] 2025-10-07 11:31:15,130 | INFO     | overall cleanup function is called
[2025-10-07 06:32:18] 2025-10-07 11:31:16,138 | INFO     | --- collectZombieJob: --- 10, [917320]
[2025-10-07 06:32:18] 2025-10-07 11:31:16,138 | INFO     | zombie collector waiting for pid 917320
[2025-10-07 06:32:18] 2025-10-07 11:31:16,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 06:32:18] 2025-10-07 11:31:16,139 | INFO     | collected zombie processes
[2025-10-07 06:32:18] 2025-10-07 11:31:16,139 | INFO     | will attempt to kill all subprocesses of pid=917320
[2025-10-07 06:32:18] 2025-10-07 11:31:16,203 | INFO     | process IDs to be killed: [917320] (in reverse order)
[2025-10-07 06:32:18] 2025-10-07 11:31:16,233 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 06:32:18] 2025-10-07 11:31:16,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 06:32:18] 2025-10-07 11:31:16,236 | INFO     | did not find any defunct processes belonging to 917320
[2025-10-07 06:32:18] 2025-10-07 11:31:16,238 | INFO     | did not find any defunct processes belonging to 917320
[2025-10-07 06:32:18] 2025-10-07 11:31:16,238 | INFO     | ready for new job
[2025-10-07 06:32:18] 2025-10-07 11:31:16,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 06:32:18] 2025-10-07 11:31:16,239 | INFO     | ***************************************
[2025-10-07 06:32:18] 2025-10-07 11:31:16,240 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 06:32:18] 2025-10-07 11:31:16,240 | INFO     | ***************************************
[2025-10-07 06:32:18] 2025-10-07 11:31:16,240 | INFO     | 
[2025-10-07 06:32:18] 2025-10-07 11:31:16,240 | INFO     | architecture information:
[2025-10-07 06:32:18] 2025-10-07 11:31:16,240 | INFO     | executing command: cat /etc/os-release
[2025-10-07 06:32:18] 2025-10-07 11:31:16,249 | INFO     | cat /etc/os-release:
[2025-10-07 06:32:18] NAME="CentOS Linux"
[2025-10-07 06:32:18] VERSION="7 (Core)"
[2025-10-07 06:32:18] ID="centos"
[2025-10-07 06:32:18] ID_LIKE="rhel fedora"
[2025-10-07 06:32:18] VERSION_ID="7"
[2025-10-07 06:32:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 06:32:18] ANSI_COLOR="0;31"
[2025-10-07 06:32:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 06:32:18] HOME_URL="https://www.centos.org/"
[2025-10-07 06:32:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 06:32:18] 
[2025-10-07 06:32:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 06:32:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 06:32:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 06:32:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 06:32:18] 
[2025-10-07 06:32:18] 2025-10-07 11:31:16,249 | INFO     | ***************************************
[2025-10-07 06:32:18] 2025-10-07 11:31:16,752 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-07 06:32:18] 2025-10-07 11:31:16,763 | INFO     | sufficient remaining disk space (3848837005312 B)
[2025-10-07 06:32:18] 2025-10-07 11:31:16,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 06:32:18] 2025-10-07 11:31:16,763 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 06:32:18] 2025-10-07 11:31:16,764 | INFO     | update_server=False
[2025-10-07 06:32:18] 2025-10-07 11:31:16,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 06:32:18] 2025-10-07 11:31:16,764 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 06:32:18] 2025-10-07 11:31:16,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 06:32:18] 2025-10-07 11:31:16,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 06:32:18] 2025-10-07 11:31:16,784 | INFO     | all data control threads have been joined
[2025-10-07 06:32:18] 2025-10-07 11:31:17,059 | INFO     | all payload control threads have been joined
[2025-10-07 06:32:18] 2025-10-07 11:31:17,101 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 06:32:18] 2025-10-07 11:31:17,101 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 06:32:18] 2025-10-07 11:31:17,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 06:32:18] 2025-10-07 11:31:17,102 | INFO     | will abort loop
[2025-10-07 06:32:18] 2025-10-07 11:31:17,768 | INFO     | [job] retrieve thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:17,769 | INFO     | [job] queue monitor thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:17,789 | INFO     | [data] control thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:18,064 | INFO     | [payload] control thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:18,089 | INFO     | all job control threads have been joined
[2025-10-07 06:32:18] 2025-10-07 11:31:18,106 | INFO     | [job] job monitor thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:18,136 | INFO     | [payload] validate_post thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:18,321 | INFO     | [job] validate thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:18,421 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:18,473 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:18,560 | INFO     | [data] copytool_in thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:18,758 | INFO     | [payload] failed_post thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:18,769 | INFO     | [data] copytool_out thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:19,086 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:19,094 | INFO     | [job] control thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:20,769 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:27,455 | INFO     | job.realtimelogging is not enabled
[2025-10-07 06:32:18] 2025-10-07 11:31:28,460 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 06:32:18] 2025-10-07 11:31:46,579 | INFO     | PID=910433 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 06:32:18] 2025-10-07 11:31:46,579 | INFO     | .. there are 2 such processes running
[2025-10-07 06:32:18] 2025-10-07 11:31:46,580 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 06:32:18] 2025-10-07 11:31:46,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 06:32:18] 2025-10-07 11:31:46,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 06:32:18] 2025-10-07 11:32:12,566 | INFO     | [monitor] cgroup control has ended
[2025-10-07 06:32:18] 2025-10-07 11:32:13,315 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629966411584)>', '<ExcThread(monitor, started 140629166253824)>']
[2025-10-07 06:32:18] 2025-10-07 11:32:13,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 06:32:18] 2025-10-07 11:32:13,714 | INFO     | [monitor] control thread has ended
[2025-10-07 06:32:18] 2025-10-07 11:32:18,340 | INFO     | all workflow threads have been joined
[2025-10-07 06:32:18] 2025-10-07 11:32:18,340 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 06:32:18] 2025-10-07 11:32:18,341 | INFO     | traces error code: 0
[2025-10-07 06:32:18] 2025-10-07 11:32:18,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 06:32:18] 2025-10-07 11:32:18,402 [wrapper] ==== pilot stdout END ====
[2025-10-07 06:32:18] 2025-10-07 11:32:18,403 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 06:32:18] 2025-10-07 11:32:18,404 [wrapper] pilotpid: 910433
[2025-10-07 06:32:18] 2025-10-07 11:32:18,406 [wrapper] Pilot exit status: 0
[2025-10-07 06:32:18] 2025-10-07 11:32:18,413 [wrapper] pandaids: 6833160129
[2025-10-07 06:32:18] 2025-10-07 11:32:18,434 [wrapper] cleanup supervisor_pilot  952594 910434
[2025-10-07 06:32:18] 2025-10-07 11:32:18,437 [wrapper] Test setup, not cleaning
[2025-10-07 06:32:18] 2025-10-07 11:32:18,438 [wrapper] apfmon messages muted
[2025-10-07 06:32:18] 2025-10-07 11:32:18,440 [wrapper] ==== wrapper stdout END ====
[2025-10-07 06:32:18] 2025-10-07 11:32:18,442 [wrapper] ==== wrapper stderr END ====
[2025-10-07 06:32:18]  *** Error codes and diagnostics ***
[2025-10-07 06:32:18]     "exeErrorCode": 0,
[2025-10-07 06:32:18]     "exeErrorDiag": "",
[2025-10-07 06:32:18]     "pilotErrorCode": 0,
[2025-10-07 06:32:18]     "pilotErrorDiag": "",
[2025-10-07 06:32:18]  *** Listing of results directory ***
[2025-10-07 06:32:18] total 387984
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc    552446 Oct  6 20:08 pilot3.tar.gz
[2025-10-07 06:32:18] -rwx------. 1 boinc boinc     36292 Oct  6 20:17 runpilot2-wrapper.sh
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc      5112 Oct  6 20:17 queuedata.json
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc       100 Oct  7 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 06:32:18] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 06:05 run_atlas
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc       105 Oct  7 06:05 job.xml
[2025-10-07 06:32:18] -rw-r--r--. 2 boinc boinc 213399639 Oct  7 06:05 EVNT.46376901._004627.pool.root.1
[2025-10-07 06:32:18] -rw-r--r--. 2 boinc boinc     15120 Oct  7 06:05 start_atlas.sh
[2025-10-07 06:32:18] drwxrwx--x. 1 boinc boinc        76 Oct  7 06:05 shared
[2025-10-07 06:32:18] -rw-r--r--. 2 boinc boinc    565601 Oct  7 06:05 input.tar.gz
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc     10054 Oct  7 06:05 init_data.xml
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc         0 Oct  7 06:05 boinc_setup_complete
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc         0 Oct  7 06:05 boinc_lockfile
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc      2520 Oct  7 06:05 pandaJob.out
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc    975010 Oct  7 06:05 agis_schedconf.cvmfs.json
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc   1560401 Oct  7 06:05 agis_ddmendpoints.agis.ALL.json
[2025-10-07 06:32:18] drwx------. 1 boinc boinc       368 Oct  7 06:05 pilot3
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc 178828037 Oct  7 06:30 HITS.46376905._124609.pool.root.1
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc       529 Oct  7 06:31 boinc_task_state.xml
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc      1046 Oct  7 06:31 memory_monitor_summary.json
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc    330995 Oct  7 06:31 log.46376905._124609.job.log.tgz.1
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc      7799 Oct  7 06:31 heartbeat.json
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc        95 Oct  7 06:31 pilot_heartbeat.json
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc        27 Oct  7 06:32 wrapper_checkpoint.txt
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc      8192 Oct  7 06:32 boinc_mmap_file
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc      5082 Oct  7 06:32 pilotlog.txt
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc    267428 Oct  7 06:32 log.46376905._124609.job.log.1
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc       357 Oct  7 06:32 output.list
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc       620 Oct  7 06:32 runtime_log
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc    614400 Oct  7 06:32 result.tar.gz
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc      8727 Oct  7 06:32 runtime_log.err
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc       649 Oct  7 06:32 OU0MDmIVBQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMcKMDmdAM6rn.diag
[2025-10-07 06:32:18] -rw-r--r--. 1 boinc boinc     21501 Oct  7 06:32 stderr.txt
[2025-10-07 06:32:18] HITS file was successfully produced:
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc 178828037 Oct  7 06:30 shared/HITS.pool.root.1
[2025-10-07 06:32:18]  *** Contents of shared directory: ***
[2025-10-07 06:32:18] total 384212
[2025-10-07 06:32:18] -rw-r--r--. 2 boinc boinc 213399639 Oct  7 06:05 ATLAS.root_0
[2025-10-07 06:32:18] -rw-r--r--. 2 boinc boinc     15120 Oct  7 06:05 start_atlas.sh
[2025-10-07 06:32:18] -rw-r--r--. 2 boinc boinc    565601 Oct  7 06:05 input.tar.gz
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc 178828037 Oct  7 06:30 HITS.pool.root.1
[2025-10-07 06:32:18] -rw-------. 1 boinc boinc    614400 Oct  7 06:32 result.tar.gz
06:32:20 (906551): run_atlas exited; CPU time 15976.837805
06:32:20 (906551): called boinc_finish(0)

</stderr_txt>
]]>

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