Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:06:32 (1268341): wrapper (7.7.26015): starting
18:06:32 (1268341): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 18:06:32] Arguments: --nthreads 4
[2025-10-11 18:06:32] Threads: 4
[2025-10-11 18:06:32] Checking for CVMFS
[2025-10-11 18:06:32] No cvmfs_config command found, will try listing directly
[2025-10-11 18:06:32] CVMFS is ok
[2025-10-11 18:06:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:06:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:06:32] Further information can be found at the LHC@home message board.
[2025-10-11 18:06:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:06:32] Checking for apptainer binary...
[2025-10-11 18:06:32] which: no apptainer in ((null))
[2025-10-11 18:06:32] apptainer is not installed, using version from CVMFS
[2025-10-11 18:06:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:06:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-11 18:06:32] apptainer works
[2025-10-11 18:06:32] Set ATHENA_PROC_NUMBER=4
[2025-10-11 18:06:32] Set ATHENA_CORE_NUMBER=4
[2025-10-11 18:06:32] Starting ATLAS job with PandaID=6833166666
[2025-10-11 18:06:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:28:35 (1481464): wrapper (7.7.26015): starting
19:28:35 (1481464): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 19:28:35] Arguments: --nthreads 4
[2025-10-11 19:28:35] Threads: 4
[2025-10-11 19:28:35] This job has been restarted, cleaning up previous attempt
[2025-10-11 19:28:35] Checking for CVMFS
[2025-10-11 19:28:35] No cvmfs_config command found, will try listing directly
[2025-10-11 19:28:35] CVMFS is ok
[2025-10-11 19:28:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:28:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:28:35] Further information can be found at the LHC@home message board.
[2025-10-11 19:28:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:28:35] Checking for apptainer binary...
[2025-10-11 19:28:35] which: no apptainer in ((null))
[2025-10-11 19:28:35] apptainer is not installed, using version from CVMFS
[2025-10-11 19:28:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:28:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-11 19:28:36] apptainer works
[2025-10-11 19:28:36] Set ATHENA_PROC_NUMBER=4
[2025-10-11 19:28:36] Set ATHENA_CORE_NUMBER=4
[2025-10-11 19:28:36] Starting ATLAS job with PandaID=6833166666
[2025-10-11 19:28:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:04:32]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:04:32] 2025-10-11 19:47:52,534 | INFO     | sum of square deviations: 797291228.0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,535 | INFO     | sum of deviations: -4993955869.000001
[2025-10-11 22:04:32] 2025-10-11 19:47:52,535 | INFO     | mean x: 1760207912.0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,535 | INFO     | mean y: 2306442.576642336
[2025-10-11 22:04:32] 2025-10-11 19:47:52,535 | INFO     | -- intersect: 11027638622.441837
[2025-10-11 22:04:32] 2025-10-11 19:47:52,535 | INFO     | intersect: 11027638622.441837
[2025-10-11 22:04:32] 2025-10-11 19:47:52,535 | INFO     | chi2: 2.309254778278805
[2025-10-11 22:04:32] 2025-10-11 19:47:52,536 | INFO     | sum of square deviations: 713140813.0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,536 | INFO     | sum of deviations: 4577506886.499999
[2025-10-11 22:04:32] 2025-10-11 19:47:52,537 | INFO     | mean x: 1760207759.5
[2025-10-11 22:04:32] 2025-10-11 19:47:52,537 | INFO     | mean y: 2323281.143939394
[2025-10-11 22:04:32] 2025-10-11 19:47:52,537 | INFO     | -- intersect: -11296094918.884087
[2025-10-11 22:04:32] 2025-10-11 19:47:52,537 | INFO     | intersect: -11296094918.884087
[2025-10-11 22:04:32] 2025-10-11 19:47:52,537 | INFO     | chi2: 1.3173423117490615
[2025-10-11 22:04:32] 2025-10-11 19:47:52,537 | INFO     | current chi2=1.3173423117490615 (change=42.95379080124984 %)
[2025-10-11 22:04:32] 2025-10-11 19:47:52,538 | INFO     | sum of square deviations: 635130048.0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,538 | INFO     | sum of deviations: 4491897137.999999
[2025-10-11 22:04:32] 2025-10-11 19:47:52,538 | INFO     | mean x: 1760207607.0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,538 | INFO     | mean y: 2323113.6692913384
[2025-10-11 22:04:32] 2025-10-11 19:47:52,538 | INFO     | -- intersect: -12446578551.536016
[2025-10-11 22:04:32] 2025-10-11 19:47:52,539 | INFO     | intersect: -12446578551.536016
[2025-10-11 22:04:32] 2025-10-11 19:47:52,539 | INFO     | chi2: 1.3187024796380906
[2025-10-11 22:04:32] 2025-10-11 19:47:52,539 | INFO     | current chi2=1.3187024796380906 (change=-0.10325090729251908 %)
[2025-10-11 22:04:32] 2025-10-11 19:47:52,539 | INFO     | right removable region: 126
[2025-10-11 22:04:32] 2025-10-11 19:47:52,539 | INFO     | sum of square deviations: 713140813.0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,540 | INFO     | sum of deviations: -20542549008.5
[2025-10-11 22:04:32] 2025-10-11 19:47:52,540 | INFO     | mean x: 1760208064.5
[2025-10-11 22:04:32] 2025-10-11 19:47:52,540 | INFO     | mean y: 2334024.3106060605
[2025-10-11 22:04:32] 2025-10-11 19:47:52,540 | INFO     | -- intersect: 50706430285.51867
[2025-10-11 22:04:32] 2025-10-11 19:47:52,540 | INFO     | intersect: 50706430285.51867
[2025-10-11 22:04:32] 2025-10-11 19:47:52,540 | INFO     | chi2: 1.066437363573986
[2025-10-11 22:04:32] 2025-10-11 19:47:52,541 | INFO     | current chi2=1.066437363573986 (change=53.81898205407843 %)
[2025-10-11 22:04:32] 2025-10-11 19:47:52,541 | INFO     | sum of square deviations: 635130048.0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,541 | INFO     | sum of deviations: -18989356485.999996
[2025-10-11 22:04:32] 2025-10-11 19:47:52,542 | INFO     | mean x: 1760208217.0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,542 | INFO     | mean y: 2330976.929133858
[2025-10-11 22:04:32] 2025-10-11 19:47:52,542 | INFO     | -- intersect: 52629696706.91493
[2025-10-11 22:04:32] 2025-10-11 19:47:52,542 | INFO     | intersect: 52629696706.91493
[2025-10-11 22:04:32] 2025-10-11 19:47:52,542 | INFO     | chi2: 1.067641956767332
[2025-10-11 22:04:32] 2025-10-11 19:47:52,542 | INFO     | current chi2=1.067641956767332 (change=-0.11295489397605028 %)
[2025-10-11 22:04:32] 2025-10-11 19:47:52,542 | INFO     | left removable region: 20
[2025-10-11 22:04:32] 2025-10-11 19:47:52,542 | INFO     | sum of square deviations: 369281342.5
[2025-10-11 22:04:32] 2025-10-11 19:47:52,543 | INFO     | sum of deviations: -5577168817.000001
[2025-10-11 22:04:32] 2025-10-11 19:47:52,543 | INFO     | mean x: 1760208186.5
[2025-10-11 22:04:32] 2025-10-11 19:47:52,543 | INFO     | mean y: 2341938.283018868
[2025-10-11 22:04:32] 2025-10-11 19:47:52,543 | INFO     | -- intersect: 26586350062.59253
[2025-10-11 22:04:32] 2025-10-11 19:47:52,544 | INFO     | intersect: 26586350062.59253
[2025-10-11 22:04:32] 2025-10-11 19:47:52,544 | INFO     | chi2: 0.027824654756709394
[2025-10-11 22:04:32] 2025-10-11 19:47:52,544 | INFO     | -- intersect: 26586350062.59253
[2025-10-11 22:04:32] 2025-10-11 19:47:52,544 | INFO     | current memory leak: -15.10 B/s (using 106 data points, chi2=0.03)
[2025-10-11 22:04:32] 2025-10-11 19:47:52,545 | INFO     | could have reported an average CPU frequency of 2712 MHz (8 samples)
[2025-10-11 22:04:32] 2025-10-11 19:47:52,545 | INFO     | ..............................
[2025-10-11 22:04:32] 2025-10-11 19:47:52,545 | INFO     | . Timing measurements:
[2025-10-11 22:04:32] 2025-10-11 19:47:52,545 | INFO     | . get job = 0 s
[2025-10-11 22:04:32] 2025-10-11 19:47:52,545 | INFO     | . initial setup = 1 s
[2025-10-11 22:04:32] 2025-10-11 19:47:52,545 | INFO     | . payload setup = 8 s
[2025-10-11 22:04:32] 2025-10-11 19:47:52,545 | INFO     | . stage-in = 0 s
[2025-10-11 22:04:32] 2025-10-11 19:47:52,545 | INFO     | . payload execution = 8303 s
[2025-10-11 22:04:32] 2025-10-11 19:47:52,545 | INFO     | . stage-out = 1 s
[2025-10-11 22:04:32] 2025-10-11 19:47:52,546 | INFO     | . log creation = 0 s
[2025-10-11 22:04:32] 2025-10-11 19:47:52,546 | INFO     | ..............................
[2025-10-11 22:04:32] 2025-10-11 19:47:52,646 | INFO     | 
[2025-10-11 22:04:32] 2025-10-11 19:47:52,646 | INFO     | job summary report
[2025-10-11 22:04:32] 2025-10-11 19:47:52,647 | INFO     | --------------------------------------------------
[2025-10-11 22:04:32] 2025-10-11 19:47:52,647 | INFO     | PanDA job id: 6833166666
[2025-10-11 22:04:32] 2025-10-11 19:47:52,647 | INFO     | task id: 46376905
[2025-10-11 22:04:32] 2025-10-11 19:47:52,647 | INFO     | errors: (none)
[2025-10-11 22:04:32] 2025-10-11 19:47:52,647 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:04:32] 2025-10-11 19:47:52,647 | INFO     | pilot state: finished 
[2025-10-11 22:04:32] 2025-10-11 19:47:52,647 | INFO     | transexitcode: 0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,647 | INFO     | exeerrorcode: 0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,647 | INFO     | exeerrordiag: 
[2025-10-11 22:04:32] 2025-10-11 19:47:52,648 | INFO     | exitcode: 0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,648 | INFO     | exitmsg: OK
[2025-10-11 22:04:32] 2025-10-11 19:47:52,648 | INFO     | cpuconsumptiontime: 31682 s
[2025-10-11 22:04:32] 2025-10-11 19:47:52,648 | INFO     | nevents: 400
[2025-10-11 22:04:32] 2025-10-11 19:47:52,648 | INFO     | neventsw: 0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,648 | INFO     | pid: 1492791
[2025-10-11 22:04:32] 2025-10-11 19:47:52,648 | INFO     | pgrp: 1492791
[2025-10-11 22:04:32] 2025-10-11 19:47:52,648 | INFO     | corecount: 4
[2025-10-11 22:04:32] 2025-10-11 19:47:52,649 | INFO     | event service: False
[2025-10-11 22:04:32] 2025-10-11 19:47:52,649 | INFO     | sizes: {0: 2348660, 1: 2348859, 8: 2349121, 11: 2349149, 8316: 2377425, 8317: 2386445, 8318: 2386629, 8325: 2386823}
[2025-10-11 22:04:32] 2025-10-11 19:47:52,649 | INFO     | --------------------------------------------------
[2025-10-11 22:04:32] 2025-10-11 19:47:52,649 | INFO     | 
[2025-10-11 22:04:32] 2025-10-11 19:47:52,649 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2025-10-11 22:04:32] 2025-10-11 19:47:52,679 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,680 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,680 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,680 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,680 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,680 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,681 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:04:32] 2025-10-11 19:47:52,682 | INFO     | job 6833166666 has completed (purged errors)
[2025-10-11 22:04:32] 2025-10-11 19:47:52,682 | INFO     | overall cleanup function is called
[2025-10-11 22:04:32] 2025-10-11 19:47:53,475 | INFO     | PID=1485455 has CPU usage=22.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 22:04:32] 2025-10-11 19:47:53,475 | INFO     | .. there are 13 such processes running
[2025-10-11 22:04:32] 2025-10-11 19:47:53,692 | INFO     | --- collectZombieJob: --- 10, [1492791]
[2025-10-11 22:04:32] 2025-10-11 19:47:53,692 | INFO     | zombie collector waiting for pid 1492791
[2025-10-11 22:04:32] 2025-10-11 19:47:53,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:04:32] 2025-10-11 19:47:53,692 | INFO     | collected zombie processes
[2025-10-11 22:04:32] 2025-10-11 19:47:53,692 | INFO     | will attempt to kill all subprocesses of pid=1492791
[2025-10-11 22:04:32] 2025-10-11 19:47:54,481 | INFO     | process IDs to be killed: [1492791] (in reverse order)
[2025-10-11 22:04:32] 2025-10-11 19:47:54,754 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:04:32] 2025-10-11 19:47:54,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:04:32] 2025-10-11 19:47:54,787 | INFO     | did not find any defunct processes belonging to 1492791
[2025-10-11 22:04:32] 2025-10-11 19:47:54,816 | INFO     | did not find any defunct processes belonging to 1492791
[2025-10-11 22:04:32] 2025-10-11 19:47:54,816 | INFO     | ready for new job
[2025-10-11 22:04:32] 2025-10-11 19:47:54,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:04:32] 2025-10-11 19:47:54,819 | INFO     | ***************************************
[2025-10-11 22:04:32] 2025-10-11 19:47:54,819 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 22:04:32] 2025-10-11 19:47:54,819 | INFO     | ***************************************
[2025-10-11 22:04:32] 2025-10-11 19:47:54,819 | INFO     | 
[2025-10-11 22:04:32] 2025-10-11 19:47:54,828 | INFO     | architecture information:
[2025-10-11 22:04:32] 2025-10-11 19:47:54,828 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:04:32] 2025-10-11 19:47:54,854 | INFO     | cat /etc/os-release:
[2025-10-11 22:04:32] NAME="CentOS Linux"
[2025-10-11 22:04:32] VERSION="7 (Core)"
[2025-10-11 22:04:32] ID="centos"
[2025-10-11 22:04:32] ID_LIKE="rhel fedora"
[2025-10-11 22:04:32] VERSION_ID="7"
[2025-10-11 22:04:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:04:32] ANSI_COLOR="0;31"
[2025-10-11 22:04:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:04:32] HOME_URL="https://www.centos.org/"
[2025-10-11 22:04:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:04:32] 
[2025-10-11 22:04:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:04:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:04:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:04:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:04:32] 
[2025-10-11 22:04:32] 2025-10-11 19:47:54,855 | INFO     | ***************************************
[2025-10-11 22:04:32] 2025-10-11 19:47:55,357 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2025-10-11 22:04:32] 2025-10-11 19:47:55,384 | INFO     | sufficient remaining disk space (3334306004992 B)
[2025-10-11 22:04:32] 2025-10-11 19:47:55,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:04:32] 2025-10-11 19:47:55,384 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:04:32] 2025-10-11 19:47:55,384 | INFO     | update_server=False
[2025-10-11 22:04:32] 2025-10-11 19:47:55,385 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:04:32] 2025-10-11 19:47:55,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:04:32] 2025-10-11 19:47:56,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:04:32] 2025-10-11 19:47:56,003 | INFO     | aborting loop
[2025-10-11 22:04:32] 2025-10-11 19:47:56,163 | INFO     | all payload control threads have been joined
[2025-10-11 22:04:32] 2025-10-11 19:47:56,390 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:56,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:04:32] 2025-10-11 19:47:56,443 | INFO     | all data control threads have been joined
[2025-10-11 22:04:32] 2025-10-11 19:47:56,510 | INFO     | [job] validate thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:56,577 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:56,774 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:56,987 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:57,008 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:57,037 | INFO     | all job control threads have been joined
[2025-10-11 22:04:32] 2025-10-11 19:47:57,168 | INFO     | [payload] control thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:57,175 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:57,390 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:57,449 | INFO     | [data] control thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:57,477 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:57,607 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:57,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:04:32] 2025-10-11 19:47:58,042 | INFO     | [job] control thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:47:58,660 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:48:00,396 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:48:02,774 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:04:32] 2025-10-11 19:48:06,282 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:04:32] 2025-10-11 19:48:07,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:04:32] 2025-10-11 19:48:08,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23005468665664)>', '<ExcThread(monitor, started 23005233116928)>']
[2025-10-11 22:04:32] 2025-10-11 19:48:13,742 | INFO     | all workflow threads have been joined
[2025-10-11 22:04:32] 2025-10-11 19:48:13,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:04:32] 2025-10-11 19:48:13,742 | INFO     | traces error code: 0
[2025-10-11 22:04:32] 2025-10-11 19:48:13,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:04:32] 2025-10-11 19:48:24,541 | INFO     | 8345s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 22:04:32] 2025-10-11 19:48:26,504 | INFO     | PID=1485455 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:04:32] 2025-10-11 19:48:26,505 | INFO     | .. there are 13 such processes running
[2025-10-11 22:04:32] 2025-10-11 19:48:26,505 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:04:32] 2025-10-11 19:48:26,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:04:32] 2025-10-11 19:48:26,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:04:32] 2025-10-11 19:48:26,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:04:32] 2025-10-11 19:48:26,505 | INFO     | [monitor] control thread has ended
[2025-10-11 22:04:32] 2025-10-11 19:48:26,655 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:04:32] 2025-10-11 19:48:26,661 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:04:32] 2025-10-11 19:48:26,664 [wrapper] pilotpid: 1485455
[2025-10-11 22:04:32] 2025-10-11 19:48:26,667 [wrapper] Pilot exit status: 0
[2025-10-11 22:04:32] 2025-10-11 19:48:26,680 [wrapper] pandaids: 6833166666 6833166666
[2025-10-11 22:04:32] 2025-10-11 19:48:26,855 [wrapper] cleanup supervisor_pilot 1964358 1485456
[2025-10-11 22:04:32] 2025-10-11 19:48:26,859 [wrapper] Test setup, not cleaning
[2025-10-11 22:04:32] 2025-10-11 19:48:26,863 [wrapper] apfmon messages muted
[2025-10-11 22:04:32] 2025-10-11 19:48:26,867 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:04:32] 2025-10-11 19:48:26,871 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:04:32]  *** Error codes and diagnostics ***
[2025-10-11 22:04:32]     "exeErrorCode": 0,
[2025-10-11 22:04:32]     "exeErrorDiag": "",
[2025-10-11 22:04:32]     "pilotErrorCode": 0,
[2025-10-11 22:04:32]     "pilotErrorDiag": "",
[2025-10-11 22:04:32]  *** Listing of results directory ***
[2025-10-11 22:04:32] total 596904
[2025-10-11 22:04:32] drwx------ 4 boinc boinc      4096 Jul 31 15:00 pilot3
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc    552446 Oct  7 05:46 pilot3.tar.gz
[2025-10-11 22:04:32] -rwx------ 1 boinc boinc     36292 Oct  7 06:01 runpilot2-wrapper.sh
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc      5112 Oct  7 06:01 queuedata.json
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc       100 Oct 11 18:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:04:32] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 18:06 run_atlas
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc       105 Oct 11 18:06 job.xml
[2025-10-11 22:04:32] -rw-r--r-- 3 boinc boinc 213010395 Oct 11 18:06 EVNT.46376901._004733.pool.root.1
[2025-10-11 22:04:32] -rw-r--r-- 3 boinc boinc 213010395 Oct 11 18:06 ATLAS.root_0
[2025-10-11 22:04:32] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:06 start_atlas.sh
[2025-10-11 22:04:32] drwxrwx--x 2 boinc boinc      4096 Oct 11 18:06 shared
[2025-10-11 22:04:32] -rw-r--r-- 2 boinc boinc    565598 Oct 11 18:06 input.tar.gz
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:06 boinc_lockfile
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc      6690 Oct 11 19:28 init_data.xml
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc      2521 Oct 11 19:28 pandaJob.out
[2025-10-11 22:04:32] -rw------- 1 boinc boinc    975520 Oct 11 19:28 agis_schedconf.cvmfs.json
[2025-10-11 22:04:32] -rw------- 1 boinc boinc 178324714 Oct 11 21:47 HITS.46376905._127250.pool.root.1
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc       529 Oct 11 21:47 boinc_task_state.xml
[2025-10-11 22:04:32] -rw------- 1 boinc boinc      1024 Oct 11 21:47 memory_monitor_summary.json
[2025-10-11 22:04:32] -rw------- 1 boinc boinc   1560580 Oct 11 21:47 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:04:32] -rw------- 1 boinc boinc    321570 Oct 11 21:47 log.46376905._127250.job.log.tgz.1
[2025-10-11 22:04:32] -rw------- 1 boinc boinc        97 Oct 11 21:47 pilot_heartbeat.json
[2025-10-11 22:04:32] -rw------- 1 boinc boinc      7797 Oct 11 21:47 heartbeat.json
[2025-10-11 22:04:32] -rw------- 1 boinc boinc       938 Oct 11 21:48 pilotlog.txt
[2025-10-11 22:04:32] -rw------- 1 boinc boinc   1170762 Oct 11 21:48 log.46376905._127250.job.log.1
[2025-10-11 22:04:32] -rw------- 1 boinc boinc       357 Oct 11 21:48 output.list
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc       620 Oct 11 21:48 runtime_log
[2025-10-11 22:04:32] -rw------- 1 boinc boinc   1515520 Oct 11 21:48 result.tar.gz
[2025-10-11 22:04:32] -rw------- 1 boinc boinc       787 Oct 11 21:48 eEsKDml4DQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRyVNDm4E2vym.diag
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc      9146 Oct 11 21:48 runtime_log.err
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc        26 Oct 11 22:04 wrapper_checkpoint.txt
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc      8192 Oct 11 22:04 boinc_mmap_file
[2025-10-11 22:04:32] -rw-r--r-- 1 boinc boinc     22757 Oct 11 22:04 stderr.txt
[2025-10-11 22:04:32] HITS file was successfully produced:
[2025-10-11 22:04:32] -rw------- 1 boinc boinc 178324714 Oct 11 21:47 shared/HITS.pool.root.1
[2025-10-11 22:04:32]  *** Contents of shared directory: ***
[2025-10-11 22:04:32] total 384228
[2025-10-11 22:04:32] -rw-r--r-- 3 boinc boinc 213010395 Oct 11 18:06 ATLAS.root_0
[2025-10-11 22:04:32] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:06 start_atlas.sh
[2025-10-11 22:04:32] -rw-r--r-- 2 boinc boinc    565598 Oct 11 18:06 input.tar.gz
[2025-10-11 22:04:32] -rw------- 1 boinc boinc 178324714 Oct 11 21:47 HITS.pool.root.1
[2025-10-11 22:04:32] -rw------- 1 boinc boinc   1515520 Oct 11 21:48 result.tar.gz
22:04:33 (1481464): run_atlas exited; CPU time 32177.734164
22:04:33 (1481464): called boinc_finish(0)

</stderr_txt>
]]>

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