Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:05:07 (650467): wrapper (7.7.26015): starting
15:05:07 (650467): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 15:05:07] Arguments: --nthreads 4
[2025-10-10 15:05:07] Threads: 4
[2025-10-10 15:05:07] Checking for CVMFS
[2025-10-10 15:05:07] No cvmfs_config command found, will try listing directly
[2025-10-10 15:05:07] CVMFS is ok
[2025-10-10 15:05:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 15:05:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 15:05:07] Further information can be found at the LHC@home message board.
[2025-10-10 15:05:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 15:05:07] Checking for apptainer binary...
[2025-10-10 15:05:07] which: no apptainer in ((null))
[2025-10-10 15:05:07] apptainer is not installed, using version from CVMFS
[2025-10-10 15:05:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 15:05:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-10 15:05:08] apptainer works
[2025-10-10 15:05:08] Set ATHENA_PROC_NUMBER=4
[2025-10-10 15:05:08] Set ATHENA_CORE_NUMBER=4
[2025-10-10 15:05:08] Starting ATLAS job with PandaID=6832975216
[2025-10-10 15:05:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:05:25 (965409): wrapper (7.7.26015): starting
17:05:25 (965409): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 17:05:25] Arguments: --nthreads 4
[2025-10-10 17:05:25] Threads: 4
[2025-10-10 17:05:25] This job has been restarted, cleaning up previous attempt
[2025-10-10 17:05:25] Checking for CVMFS
[2025-10-10 17:05:25] No cvmfs_config command found, will try listing directly
[2025-10-10 17:05:25] CVMFS is ok
[2025-10-10 17:05:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 17:05:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 17:05:25] Further information can be found at the LHC@home message board.
[2025-10-10 17:05:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 17:05:25] Checking for apptainer binary...
[2025-10-10 17:05:25] which: no apptainer in ((null))
[2025-10-10 17:05:25] apptainer is not installed, using version from CVMFS
[2025-10-10 17:05:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 17:05:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-10 17:05:25] apptainer works
[2025-10-10 17:05:25] Set ATHENA_PROC_NUMBER=4
[2025-10-10 17:05:25] Set ATHENA_CORE_NUMBER=4
[2025-10-10 17:05:25] Starting ATLAS job with PandaID=6832975216
[2025-10-10 17:05:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 19:53:13]  *** The last 200 lines of the pilot log: ***
[2025-10-10 19:53:13] 2025-10-10 17:39:49,427 | INFO     | intersect: -30755645142.24756
[2025-10-10 19:53:13] 2025-10-10 17:39:49,428 | INFO     | chi2: 1.293473189877767
[2025-10-10 19:53:13] 2025-10-10 17:39:49,428 | INFO     | sum of square deviations: 964976232.5
[2025-10-10 19:53:13] 2025-10-10 17:39:49,429 | INFO     | sum of deviations: 17909417061.0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,429 | INFO     | mean x: 1760113194.5
[2025-10-10 19:53:13] 2025-10-10 17:39:49,429 | INFO     | mean y: 2302152.7260273974
[2025-10-10 19:53:13] 2025-10-10 17:39:49,429 | INFO     | -- intersect: -32664410470.032288
[2025-10-10 19:53:13] 2025-10-10 17:39:49,429 | INFO     | intersect: -32664410470.032288
[2025-10-10 19:53:13] 2025-10-10 17:39:49,430 | INFO     | chi2: 1.2947012696410585
[2025-10-10 19:53:13] 2025-10-10 17:39:49,430 | INFO     | current chi2=1.2947012696410585 (change=-0.09494435392260334 %)
[2025-10-10 19:53:13] 2025-10-10 17:39:49,430 | INFO     | right removable region: 145
[2025-10-10 19:53:13] 2025-10-10 17:39:49,430 | INFO     | sum of square deviations: 964976232.5
[2025-10-10 19:53:13] 2025-10-10 17:39:49,431 | INFO     | sum of deviations: 240953446.49999875
[2025-10-10 19:53:13] 2025-10-10 17:39:49,431 | INFO     | mean x: 1760113499.5
[2025-10-10 19:53:13] 2025-10-10 17:39:49,431 | INFO     | mean y: 2330158.3493150687
[2025-10-10 19:53:13] 2025-10-10 17:39:49,431 | INFO     | -- intersect: -437168141.869907
[2025-10-10 19:53:13] 2025-10-10 17:39:49,431 | INFO     | intersect: -437168141.869907
[2025-10-10 19:53:13] 2025-10-10 17:39:49,432 | INFO     | chi2: 0.004763837492583737
[2025-10-10 19:53:13] 2025-10-10 17:39:49,432 | INFO     | current chi2=0.004763837492583737 (change=99.63170187601384 %)
[2025-10-10 19:53:13] 2025-10-10 17:39:49,432 | INFO     | sum of square deviations: 869188390.0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,433 | INFO     | sum of deviations: 993253910.9999999
[2025-10-10 19:53:13] 2025-10-10 17:39:49,433 | INFO     | mean x: 1760113652.0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,433 | INFO     | mean y: 2328951.361702128
[2025-10-10 19:53:13] 2025-10-10 17:39:49,433 | INFO     | -- intersect: -2009018402.9828408
[2025-10-10 19:53:13] 2025-10-10 17:39:49,433 | INFO     | intersect: -2009018402.9828408
[2025-10-10 19:53:13] 2025-10-10 17:39:49,434 | INFO     | chi2: 0.003317979103503501
[2025-10-10 19:53:13] 2025-10-10 17:39:49,434 | INFO     | current chi2=0.003317979103503501 (change=30.350707624496515 %)
[2025-10-10 19:53:13] 2025-10-10 17:39:49,434 | INFO     | sum of square deviations: 779958810.0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,435 | INFO     | sum of deviations: 2071141692.5000012
[2025-10-10 19:53:13] 2025-10-10 17:39:49,435 | INFO     | mean x: 1760113804.5
[2025-10-10 19:53:13] 2025-10-10 17:39:49,435 | INFO     | mean y: 2327111.3014705884
[2025-10-10 19:53:13] 2025-10-10 17:39:49,435 | INFO     | -- intersect: -4671567249.920946
[2025-10-10 19:53:13] 2025-10-10 17:39:49,435 | INFO     | intersect: -4671567249.920946
[2025-10-10 19:53:13] 2025-10-10 17:39:49,436 | INFO     | chi2: 9.00744024711192e-05
[2025-10-10 19:53:13] 2025-10-10 17:39:49,436 | INFO     | current chi2=9.00744024711192e-05 (change=97.28526311766073 %)
[2025-10-10 19:53:13] 2025-10-10 17:39:49,436 | INFO     | sum of square deviations: 697054930.0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,437 | INFO     | sum of deviations: 1817779382.0000005
[2025-10-10 19:53:13] 2025-10-10 17:39:49,437 | INFO     | mean x: 1760113957.0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,437 | INFO     | mean y: 2327575.679389313
[2025-10-10 19:53:13] 2025-10-10 17:39:49,437 | INFO     | -- intersect: -4587696428.605374
[2025-10-10 19:53:13] 2025-10-10 17:39:49,437 | INFO     | intersect: -4587696428.605374
[2025-10-10 19:53:13] 2025-10-10 17:39:49,438 | INFO     | chi2: 7.528553752037383e-05
[2025-10-10 19:53:13] 2025-10-10 17:39:49,438 | INFO     | current chi2=7.528553752037383e-05 (change=16.41849909077905 %)
[2025-10-10 19:53:13] 2025-10-10 17:39:49,438 | INFO     | left removable region: 40
[2025-10-10 19:53:13] 2025-10-10 17:39:49,438 | INFO     | sum of square deviations: 358927660.0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,439 | INFO     | sum of deviations: 862768688.9999999
[2025-10-10 19:53:13] 2025-10-10 17:39:49,439 | INFO     | mean x: 1760114384.0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,439 | INFO     | mean y: 2329069.8285714285
[2025-10-10 19:53:13] 2025-10-10 17:39:49,439 | INFO     | -- intersect: -4228527865.4483657
[2025-10-10 19:53:13] 2025-10-10 17:39:49,439 | INFO     | intersect: -4228527865.4483657
[2025-10-10 19:53:13] 2025-10-10 17:39:49,439 | INFO     | chi2: 5.286450383503755e-05
[2025-10-10 19:53:13] 2025-10-10 17:39:49,439 | INFO     | -- intersect: -4228527865.4483657
[2025-10-10 19:53:13] 2025-10-10 17:39:49,439 | INFO     | current memory leak: 2.40 B/s (using 105 data points, chi2=0.00)
[2025-10-10 19:53:13] 2025-10-10 17:39:49,440 | INFO     | could have reported an average CPU frequency of 2693 MHz (9 samples)
[2025-10-10 19:53:13] 2025-10-10 17:39:49,440 | INFO     | ..............................
[2025-10-10 19:53:13] 2025-10-10 17:39:49,440 | INFO     | . Timing measurements:
[2025-10-10 19:53:13] 2025-10-10 17:39:49,440 | INFO     | . get job = 0 s
[2025-10-10 19:53:13] 2025-10-10 17:39:49,440 | INFO     | . initial setup = 1 s
[2025-10-10 19:53:13] 2025-10-10 17:39:49,440 | INFO     | . payload setup = 8 s
[2025-10-10 19:53:13] 2025-10-10 17:39:49,440 | INFO     | . stage-in = 0 s
[2025-10-10 19:53:13] 2025-10-10 17:39:49,441 | INFO     | . payload execution = 9207 s
[2025-10-10 19:53:13] 2025-10-10 17:39:49,441 | INFO     | . stage-out = 1 s
[2025-10-10 19:53:13] 2025-10-10 17:39:49,441 | INFO     | . log creation = 0 s
[2025-10-10 19:53:13] 2025-10-10 17:39:49,441 | INFO     | ..............................
[2025-10-10 19:53:13] 2025-10-10 17:39:49,968 | INFO     | 
[2025-10-10 19:53:13] 2025-10-10 17:39:49,969 | INFO     | job summary report
[2025-10-10 19:53:13] 2025-10-10 17:39:49,969 | INFO     | --------------------------------------------------
[2025-10-10 19:53:13] 2025-10-10 17:39:49,969 | INFO     | PanDA job id: 6832975216
[2025-10-10 19:53:13] 2025-10-10 17:39:49,969 | INFO     | task id: 46376905
[2025-10-10 19:53:13] 2025-10-10 17:39:49,969 | INFO     | errors: (none)
[2025-10-10 19:53:13] 2025-10-10 17:39:49,969 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 19:53:13] 2025-10-10 17:39:49,969 | INFO     | pilot state: finished 
[2025-10-10 19:53:13] 2025-10-10 17:39:49,969 | INFO     | transexitcode: 0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,969 | INFO     | exeerrorcode: 0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | exeerrordiag: 
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | exitcode: 0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | exitmsg: OK
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | cpuconsumptiontime: 35187 s
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | nevents: 400
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | neventsw: 0
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | pid: 976871
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | pgrp: 976871
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | corecount: 4
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | event service: False
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | sizes: {0: 2347990, 1: 2348858, 8: 2349120, 12: 2349148, 9220: 2377871, 9221: 2386893, 9224: 2387077, 9233: 2387335}
[2025-10-10 19:53:13] 2025-10-10 17:39:49,970 | INFO     | --------------------------------------------------
[2025-10-10 19:53:13] 2025-10-10 17:39:49,971 | INFO     | 
[2025-10-10 19:53:13] 2025-10-10 17:39:49,971 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-10-10 19:53:13] 2025-10-10 17:39:50,004 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,006 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 19:53:13] 2025-10-10 17:39:50,006 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,006 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 19:53:13] 2025-10-10 17:39:50,006 | INFO     | job 6832975216 has completed (purged errors)
[2025-10-10 19:53:13] 2025-10-10 17:39:50,007 | INFO     | overall cleanup function is called
[2025-10-10 19:53:13] 2025-10-10 17:39:51,015 | INFO     | --- collectZombieJob: --- 10, [976871]
[2025-10-10 19:53:13] 2025-10-10 17:39:51,016 | INFO     | zombie collector waiting for pid 976871
[2025-10-10 19:53:13] 2025-10-10 17:39:51,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 19:53:13] 2025-10-10 17:39:51,016 | INFO     | collected zombie processes
[2025-10-10 19:53:13] 2025-10-10 17:39:51,016 | INFO     | will attempt to kill all subprocesses of pid=976871
[2025-10-10 19:53:13] 2025-10-10 17:39:51,754 | INFO     | process IDs to be killed: [976871] (in reverse order)
[2025-10-10 19:53:13] 2025-10-10 17:39:52,040 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 19:53:13] 2025-10-10 17:39:52,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 19:53:13] 2025-10-10 17:39:52,074 | INFO     | did not find any defunct processes belonging to 976871
[2025-10-10 19:53:13] 2025-10-10 17:39:52,105 | INFO     | did not find any defunct processes belonging to 976871
[2025-10-10 19:53:13] 2025-10-10 17:39:52,105 | INFO     | ready for new job
[2025-10-10 19:53:13] 2025-10-10 17:39:52,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 19:53:13] 2025-10-10 17:39:52,108 | INFO     | ***************************************
[2025-10-10 19:53:13] 2025-10-10 17:39:52,109 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 19:53:13] 2025-10-10 17:39:52,109 | INFO     | ***************************************
[2025-10-10 19:53:13] 2025-10-10 17:39:52,109 | INFO     | 
[2025-10-10 19:53:13] 2025-10-10 17:39:52,118 | INFO     | architecture information:
[2025-10-10 19:53:13] 2025-10-10 17:39:52,118 | INFO     | executing command: cat /etc/os-release
[2025-10-10 19:53:13] 2025-10-10 17:39:52,143 | INFO     | cat /etc/os-release:
[2025-10-10 19:53:13] NAME="CentOS Linux"
[2025-10-10 19:53:13] VERSION="7 (Core)"
[2025-10-10 19:53:13] ID="centos"
[2025-10-10 19:53:13] ID_LIKE="rhel fedora"
[2025-10-10 19:53:13] VERSION_ID="7"
[2025-10-10 19:53:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 19:53:13] ANSI_COLOR="0;31"
[2025-10-10 19:53:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 19:53:13] HOME_URL="https://www.centos.org/"
[2025-10-10 19:53:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 19:53:13] 
[2025-10-10 19:53:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 19:53:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 19:53:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 19:53:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 19:53:13] 
[2025-10-10 19:53:13] 2025-10-10 17:39:52,144 | INFO     | ***************************************
[2025-10-10 19:53:13] 2025-10-10 17:39:52,647 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-10-10 19:53:13] 2025-10-10 17:39:52,674 | INFO     | sufficient remaining disk space (3342493286400 B)
[2025-10-10 19:53:13] 2025-10-10 17:39:52,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 19:53:13] 2025-10-10 17:39:52,675 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 19:53:13] 2025-10-10 17:39:52,675 | INFO     | update_server=False
[2025-10-10 19:53:13] 2025-10-10 17:39:52,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 19:53:13] 2025-10-10 17:39:52,676 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 19:53:13] 2025-10-10 17:39:52,779 | INFO     | all job control threads have been joined
[2025-10-10 19:53:13] 2025-10-10 17:39:53,006 | INFO     | all payload control threads have been joined
[2025-10-10 19:53:13] 2025-10-10 17:39:53,016 | INFO     | all data control threads have been joined
[2025-10-10 19:53:13] 2025-10-10 17:39:53,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 19:53:13] 2025-10-10 17:39:53,480 | INFO     | [monitor] cgroup control has ended
[2025-10-10 19:53:13] 2025-10-10 17:39:53,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:53:13] 2025-10-10 17:39:53,485 | INFO     | aborting loop
[2025-10-10 19:53:13] 2025-10-10 17:39:53,682 | INFO     | [job] retrieve thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:53,770 | INFO     | [job] validate thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:53,784 | INFO     | [job] control thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:53,883 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:54,011 | INFO     | [payload] control thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:54,021 | INFO     | [data] control thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:54,021 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:54,084 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:54,256 | INFO     | [payload] failed_post thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:54,490 | INFO     | [job] job monitor thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:54,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:53:13] 2025-10-10 17:39:54,690 | INFO     | [data] copytool_in thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:55,179 | INFO     | [payload] validate_post thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:55,184 | INFO     | [data] copytool_out thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:55,569 | INFO     | [job] queue monitor thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:39:56,682 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:40:03,614 | INFO     | job.realtimelogging is not enabled
[2025-10-10 19:53:13] 2025-10-10 17:40:04,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 19:53:13] 2025-10-10 17:40:05,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22820726482752)>', '<ExcThread(monitor, started 22820417398528)>']
[2025-10-10 19:53:13] 2025-10-10 17:40:10,658 | INFO     | all workflow threads have been joined
[2025-10-10 19:53:13] 2025-10-10 17:40:10,658 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 19:53:13] 2025-10-10 17:40:10,658 | INFO     | traces error code: 0
[2025-10-10 19:53:13] 2025-10-10 17:40:10,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 19:53:13] 2025-10-10 17:40:22,337 | INFO     | PID=969406 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 19:53:13] 2025-10-10 17:40:22,338 | INFO     | .. there are 12 such processes running
[2025-10-10 19:53:13] 2025-10-10 17:40:22,339 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 19:53:13] 2025-10-10 17:40:22,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 19:53:13] 2025-10-10 17:40:22,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 19:53:13] 2025-10-10 17:40:22,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 19:53:13] 2025-10-10 17:40:22,339 | INFO     | [monitor] control thread has ended
[2025-10-10 19:53:13] 2025-10-10 17:40:22,568 [wrapper] ==== pilot stdout END ====
[2025-10-10 19:53:13] 2025-10-10 17:40:22,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 19:53:13] 2025-10-10 17:40:22,575 [wrapper] pilotpid: 969406
[2025-10-10 19:53:13] 2025-10-10 17:40:22,579 [wrapper] Pilot exit status: 0
[2025-10-10 19:53:13] 2025-10-10 17:40:22,595 [wrapper] pandaids: 6832975216 6832975216
[2025-10-10 19:53:13] 2025-10-10 17:40:22,781 [wrapper] cleanup supervisor_pilot 1438808 969407
[2025-10-10 19:53:13] 2025-10-10 17:40:22,785 [wrapper] Test setup, not cleaning
[2025-10-10 19:53:13] 2025-10-10 17:40:22,789 [wrapper] apfmon messages muted
[2025-10-10 19:53:13] 2025-10-10 17:40:22,792 [wrapper] ==== wrapper stdout END ====
[2025-10-10 19:53:13] 2025-10-10 17:40:22,796 [wrapper] ==== wrapper stderr END ====
[2025-10-10 19:53:13]  *** Error codes and diagnostics ***
[2025-10-10 19:53:13]     "exeErrorCode": 0,
[2025-10-10 19:53:13]     "exeErrorDiag": "",
[2025-10-10 19:53:13]     "pilotErrorCode": 0,
[2025-10-10 19:53:13]     "pilotErrorDiag": "",
[2025-10-10 19:53:13]  *** Listing of results directory ***
[2025-10-10 19:53:13] total 608032
[2025-10-10 19:53:13] drwx------ 4 boinc boinc      4096 Jul 31 15:00 pilot3
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc    552446 Oct  7 00:09 pilot3.tar.gz
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc      5112 Oct  7 00:09 queuedata.json
[2025-10-10 19:53:13] -rwx------ 1 boinc boinc     36292 Oct  7 00:11 runpilot2-wrapper.sh
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc       100 Oct 10 15:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 19:53:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 15:05 run_atlas
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc       105 Oct 10 15:05 job.xml
[2025-10-10 19:53:13] -rw-r--r-- 3 boinc boinc 214632635 Oct 10 15:05 EVNT.46376901._004484.pool.root.1
[2025-10-10 19:53:13] -rw-r--r-- 3 boinc boinc 214632635 Oct 10 15:05 ATLAS.root_0
[2025-10-10 19:53:13] -rw-r--r-- 2 boinc boinc     15120 Oct 10 15:05 start_atlas.sh
[2025-10-10 19:53:13] drwxrwx--x 2 boinc boinc      4096 Oct 10 15:05 shared
[2025-10-10 19:53:13] -rw-r--r-- 2 boinc boinc    565599 Oct 10 15:05 input.tar.gz
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc         0 Oct 10 15:05 boinc_lockfile
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc      6693 Oct 10 17:05 init_data.xml
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc      2520 Oct 10 17:05 pandaJob.out
[2025-10-10 19:53:13] -rw------- 1 boinc boinc    975533 Oct 10 17:05 agis_schedconf.cvmfs.json
[2025-10-10 19:53:13] -rw------- 1 boinc boinc 186263113 Oct 10 19:39 HITS.46376905._120735.pool.root.1
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc       529 Oct 10 19:39 boinc_task_state.xml
[2025-10-10 19:53:13] -rw------- 1 boinc boinc      1022 Oct 10 19:39 memory_monitor_summary.json
[2025-10-10 19:53:13] -rw------- 1 boinc boinc   1560580 Oct 10 19:39 agis_ddmendpoints.agis.ALL.json
[2025-10-10 19:53:13] -rw------- 1 boinc boinc    315459 Oct 10 19:39 log.46376905._120735.job.log.tgz.1
[2025-10-10 19:53:13] -rw------- 1 boinc boinc      7779 Oct 10 19:39 heartbeat.json
[2025-10-10 19:53:13] -rw------- 1 boinc boinc        97 Oct 10 19:40 pilot_heartbeat.json
[2025-10-10 19:53:13] -rw------- 1 boinc boinc       822 Oct 10 19:40 pilotlog.txt
[2025-10-10 19:53:13] -rw------- 1 boinc boinc   1284298 Oct 10 19:40 log.46376905._120735.job.log.1
[2025-10-10 19:53:13] -rw------- 1 boinc boinc       357 Oct 10 19:40 output.list
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc       620 Oct 10 19:40 runtime_log
[2025-10-10 19:53:13] -rw------- 1 boinc boinc   1617920 Oct 10 19:40 result.tar.gz
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc      9161 Oct 10 19:40 runtime_log.err
[2025-10-10 19:53:13] -rw------- 1 boinc boinc       788 Oct 10 19:40 CWJKDmvb8P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmiEKMDmYup1Xo.diag
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc        26 Oct 10 19:53 wrapper_checkpoint.txt
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc      8192 Oct 10 19:53 boinc_mmap_file
[2025-10-10 19:53:13] -rw-r--r-- 1 boinc boinc     22611 Oct 10 19:53 stderr.txt
[2025-10-10 19:53:13] HITS file was successfully produced:
[2025-10-10 19:53:13] -rw------- 1 boinc boinc 186263113 Oct 10 19:39 shared/HITS.pool.root.1
[2025-10-10 19:53:13]  *** Contents of shared directory: ***
[2025-10-10 19:53:13] total 393664
[2025-10-10 19:53:13] -rw-r--r-- 3 boinc boinc 214632635 Oct 10 15:05 ATLAS.root_0
[2025-10-10 19:53:13] -rw-r--r-- 2 boinc boinc     15120 Oct 10 15:05 start_atlas.sh
[2025-10-10 19:53:13] -rw-r--r-- 2 boinc boinc    565599 Oct 10 15:05 input.tar.gz
[2025-10-10 19:53:13] -rw------- 1 boinc boinc 186263113 Oct 10 19:39 HITS.pool.root.1
[2025-10-10 19:53:13] -rw------- 1 boinc boinc   1617920 Oct 10 19:40 result.tar.gz
19:53:14 (965409): run_atlas exited; CPU time 35805.382812
19:53:14 (965409): called boinc_finish(0)

</stderr_txt>
]]>

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