Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:47:35 (3807792): wrapper (7.7.26015): starting
23:47:35 (3807792): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 23:47:35] Arguments: --nthreads 12
[2025-10-06 23:47:35] Threads: 12
[2025-10-06 23:47:35] Checking for CVMFS
[2025-10-06 23:47:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 23:47:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 23:47:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 23:47:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 23:47:35] 2.11.5.0 2538 23954 237148 151425 0 610 34366783 45568000 17343 130560 0 230351484 99.867 105017833 29580 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 23:47:35] CVMFS is ok
[2025-10-06 23:47:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 23:47:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 23:47:36] Further information can be found at the LHC@home message board.
[2025-10-06 23:47:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 23:47:36] Checking for apptainer binary...
[2025-10-06 23:47:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 23:47:36] Running /usr/bin/apptainer --version
[2025-10-06 23:47:36] apptainer version 1.4.1-1.el9
[2025-10-06 23:47:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 23:47:36] wns0038.triumf.lcg
[2025-10-06 23:47:36] apptainer works
[2025-10-06 23:47:36] Set ATHENA_PROC_NUMBER=12
[2025-10-06 23:47:36] Set ATHENA_CORE_NUMBER=12
[2025-10-06 23:47:36] Starting ATLAS job with PandaID=6833167357
[2025-10-06 23:47:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 23:50:54]  *** The last 200 lines of the pilot log: ***
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | WARNING  | found no stored workdir sizes
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | WARNING  | wrong length of table data, x=[1759819688.0], y=[2145.0] (must be same and length>=4)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | could have reported an average CPU frequency of 2797 MHz (4 samples)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | ..............................
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . Timing measurements:
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . get job = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . initial setup = 2 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . payload setup = 4 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . stage-in = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . payload execution = 16 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | . stage-out = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | . log creation = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | ..............................
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833167357/pilotlog.txt
[2025-10-06 23:50:54] 2025-10-07 06:50:22,586 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 23:50:54] - Log from pilotlog.txt -
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | WARNING  | found no stored workdir sizes
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | WARNING  | wrong length of table data, x=[1759819688.0], y=[2145.0] (must be same and length>=4)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | could have reported an average CPU frequency of 2797 MHz (4 samples)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | ..............................
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . Timing measurements:
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . get job = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . initial setup = 2 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . payload setup = 4 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . stage-in = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . payload execution = 16 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | . stage-out = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | . log creation = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | ..............................
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833167357/pilotlog.txt
[2025-10-06 23:50:54] 2025-10-07 06:50:22,586 | WARNING  | 
[2025-10-06 23:50:54] [begin log extracts]
[2025-10-06 23:50:54] - Log from pilotlog.txt -
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | WARNING  | found no stored workdir sizes
[2025-10-06 23:50:54] 2025-10-07 06:50:22,575 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | WARNING  | wrong length of table data, x=[1759819688.0], y=[2145.0] (must be same and length>=4)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | could have reported an average CPU frequency of 2797 MHz (4 samples)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | ..............................
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . Timing measurements:
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . get job = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . initial setup = 2 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . payload setup = 4 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . stage-in = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,576 | INFO     | . payload execution = 16 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | . stage-out = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | . log creation = 0 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | ..............................
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 23:50:54] 2025-10-07 06:50:22,577 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833167357/pilotlog.txt
[2025-10-06 23:50:54] [end log extracts]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,587 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,587 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 23:50:54] 2025-10-07 06:50:22,648 | INFO     | 
[2025-10-06 23:50:54] 2025-10-07 06:50:22,648 | INFO     | job summary report
[2025-10-06 23:50:54] 2025-10-07 06:50:22,649 | INFO     | --------------------------------------------------
[2025-10-06 23:50:54] 2025-10-07 06:50:22,649 | INFO     | PanDA job id: 6833167357
[2025-10-06 23:50:54] 2025-10-07 06:50:22,649 | INFO     | task id: 46376905
[2025-10-06 23:50:54] 2025-10-07 06:50:22,649 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 23:48:15,621 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 23:50:54] 2025-10-07 06:50:22,649 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 23:50:54] 2025-10-07 06:50:22,649 | INFO     | pilot state: failed 
[2025-10-06 23:50:54] 2025-10-07 06:50:22,649 | INFO     | transexitcode: 65
[2025-10-06 23:50:54] 2025-10-07 06:50:22,649 | INFO     | exeerrorcode: 65
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | exitcode: 65
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | cpuconsumptiontime: 17 s
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | nevents: 0
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | neventsw: 0
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | pid: 3818041
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | pgrp: 3818041
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | corecount: 12
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | event service: False
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | sizes: {0: 2348817, 3: 2349079, 11: 2349107, 23: 2372306, 24: 2376626, 144: 2376764}
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | --------------------------------------------------
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | 
[2025-10-06 23:50:54] 2025-10-07 06:50:22,650 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 23:50:54] 2025-10-07 06:50:22,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 23:50:54] 2025-10-07 06:50:22,666 | INFO     | job 6833167357 has completed (purged errors)
[2025-10-06 23:50:54] 2025-10-07 06:50:22,666 | INFO     | overall cleanup function is called
[2025-10-06 23:50:54] 2025-10-07 06:50:23,672 | INFO     | --- collectZombieJob: --- 10, [3818041]
[2025-10-06 23:50:54] 2025-10-07 06:50:23,672 | INFO     | zombie collector waiting for pid 3818041
[2025-10-06 23:50:54] 2025-10-07 06:50:23,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 23:50:54] 2025-10-07 06:50:23,672 | INFO     | collected zombie processes
[2025-10-06 23:50:54] 2025-10-07 06:50:23,672 | INFO     | will attempt to kill all subprocesses of pid=3818041
[2025-10-06 23:50:54] 2025-10-07 06:50:23,871 | INFO     | process IDs to be killed: [3818041] (in reverse order)
[2025-10-06 23:50:54] 2025-10-07 06:50:23,943 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 23:50:54] 2025-10-07 06:50:23,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 23:50:54] 2025-10-07 06:50:23,951 | INFO     | did not find any defunct processes belonging to 3818041
[2025-10-06 23:50:54] 2025-10-07 06:50:23,960 | INFO     | did not find any defunct processes belonging to 3818041
[2025-10-06 23:50:54] 2025-10-07 06:50:23,960 | INFO     | ready for new job
[2025-10-06 23:50:54] 2025-10-07 06:50:23,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 23:50:54] 2025-10-07 06:50:23,962 | INFO     | ***************************************
[2025-10-06 23:50:54] 2025-10-07 06:50:23,962 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 23:50:54] 2025-10-07 06:50:23,962 | INFO     | ***************************************
[2025-10-06 23:50:54] 2025-10-07 06:50:23,962 | INFO     | 
[2025-10-06 23:50:54] 2025-10-07 06:50:23,964 | INFO     | architecture information:
[2025-10-06 23:50:54] 2025-10-07 06:50:23,964 | INFO     | executing command: cat /etc/os-release
[2025-10-06 23:50:54] 2025-10-07 06:50:23,974 | INFO     | cat /etc/os-release:
[2025-10-06 23:50:54] NAME="CentOS Linux"
[2025-10-06 23:50:54] VERSION="7 (Core)"
[2025-10-06 23:50:54] ID="centos"
[2025-10-06 23:50:54] ID_LIKE="rhel fedora"
[2025-10-06 23:50:54] VERSION_ID="7"
[2025-10-06 23:50:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 23:50:54] ANSI_COLOR="0;31"
[2025-10-06 23:50:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 23:50:54] HOME_URL="https://www.centos.org/"
[2025-10-06 23:50:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 23:50:54] 
[2025-10-06 23:50:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 23:50:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 23:50:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 23:50:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 23:50:54] 
[2025-10-06 23:50:54] 2025-10-07 06:50:23,974 | INFO     | ***************************************
[2025-10-06 23:50:54] 2025-10-07 06:50:24,476 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 23:50:54] 2025-10-07 06:50:24,488 | INFO     | sufficient remaining disk space (2203491237888 B)
[2025-10-06 23:50:54] 2025-10-07 06:50:24,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 23:50:54] 2025-10-07 06:50:24,489 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 23:50:54] 2025-10-07 06:50:24,489 | INFO     | update_server=False
[2025-10-06 23:50:54] 2025-10-07 06:50:24,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 23:50:54] 2025-10-07 06:50:24,489 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 23:50:54] 2025-10-07 06:50:24,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 23:50:54] 2025-10-07 06:50:25,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 23:50:54] 2025-10-07 06:50:25,197 | INFO     | aborting loop
[2025-10-06 23:50:54] 2025-10-07 06:50:25,213 | INFO     | all payload control threads have been joined
[2025-10-06 23:50:54] 2025-10-07 06:50:25,291 | INFO     | all data control threads have been joined
[2025-10-06 23:50:54] 2025-10-07 06:50:25,494 | INFO     | [job] retrieve thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:25,495 | INFO     | [job] queue monitor thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:25,678 | INFO     | [data] copytool_in thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,191 | INFO     | all job control threads have been joined
[2025-10-06 23:50:54] 2025-10-07 06:50:26,202 | INFO     | [job] job monitor thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,219 | INFO     | [payload] control thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,296 | INFO     | [data] control thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 23:50:54] 2025-10-07 06:50:26,477 | INFO     | [job] validate thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,495 | INFO     | [data] copytool_out thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,593 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,613 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,726 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,761 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,888 | INFO     | [payload] failed_post thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:26,949 | INFO     | [payload] validate_post thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:27,196 | INFO     | [job] control thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:30,448 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 23:50:54] 2025-10-07 06:50:44,326 | INFO     | [monitor] cgroup control has ended
[2025-10-06 23:50:54] 2025-10-07 06:50:46,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540187215680)>', '<ExcThread(monitor, started 140539357808384)>']
[2025-10-06 23:50:54] 2025-10-07 06:50:51,041 | INFO     | all workflow threads have been joined
[2025-10-06 23:50:54] 2025-10-07 06:50:51,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 23:50:54] 2025-10-07 06:50:51,041 | INFO     | traces error code: 0
[2025-10-06 23:50:54] 2025-10-07 06:50:51,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 23:50:54] 2025-10-07 06:50:54,568 | INFO     | PID=3811446 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 23:50:54] 2025-10-07 06:50:54,568 | INFO     | .. there are 35 such processes running
[2025-10-06 23:50:54] 2025-10-07 06:50:54,569 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 23:50:54] 2025-10-07 06:50:54,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 23:50:54] 2025-10-07 06:50:54,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 23:50:54] 2025-10-07 06:50:54,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 23:50:54] 2025-10-07 06:50:54,569 | CRITICAL | thread 'MainThread' is not alive
[2025-10-06 23:50:54] 2025-10-07 06:50:54,569 | INFO     | [monitor] control thread has ended
[2025-10-06 23:50:54] 2025-10-07 06:50:54,691 [wrapper] ==== pilot stdout END ====
[2025-10-06 23:50:54] 2025-10-07 06:50:54,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 23:50:54] 2025-10-07 06:50:54,695 [wrapper] pilotpid: 3811446
[2025-10-06 23:50:54] 2025-10-07 06:50:54,697 [wrapper] Pilot exit status: 0
[2025-10-06 23:50:54] 2025-10-07 06:50:54,703 [wrapper] pandaids: 6833167357
[2025-10-06 23:50:54] 2025-10-07 06:50:54,750 [wrapper] cleanup supervisor_pilot 3811452 3811447
[2025-10-06 23:50:54] 2025-10-07 06:50:54,752 [wrapper] Test setup, not cleaning
[2025-10-06 23:50:54] 2025-10-07 06:50:54,754 [wrapper] apfmon messages muted
[2025-10-06 23:50:54] 2025-10-07 06:50:54,756 [wrapper] ==== wrapper stdout END ====
[2025-10-06 23:50:54] 2025-10-07 06:50:54,758 [wrapper] ==== wrapper stderr END ====
[2025-10-06 23:50:54]  *** Error codes and diagnostics ***
[2025-10-06 23:50:54]     "exeErrorCode": 65,
[2025-10-06 23:50:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 23:50:54]     "pilotErrorCode": 1305,
[2025-10-06 23:50:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 23:50:54]  *** Listing of results directory ***
[2025-10-06 23:50:54] total 212108
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc    552446 Oct  6 20:46 pilot3.tar.gz
[2025-10-06 23:50:54] -rwx------. 1 boinc boinc     36292 Oct  6 21:14 runpilot2-wrapper.sh
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc      5112 Oct  6 21:14 queuedata.json
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc       100 Oct  6 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 23:50:54] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 23:47 run_atlas
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc       105 Oct  6 23:47 job.xml
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc      6594 Oct  6 23:47 init_data.xml
[2025-10-06 23:50:54] -rw-r--r--. 2 boinc boinc 213114141 Oct  6 23:47 EVNT.46376901._004759.pool.root.1
[2025-10-06 23:50:54] -rw-r--r--. 2 boinc boinc     15120 Oct  6 23:47 start_atlas.sh
[2025-10-06 23:50:54] drwxrwx--x. 2 boinc boinc      4096 Oct  6 23:47 shared
[2025-10-06 23:50:54] -rw-r--r--. 2 boinc boinc    565597 Oct  6 23:47 input.tar.gz
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc         0 Oct  6 23:47 boinc_lockfile
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc      2521 Oct  6 23:47 pandaJob.out
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc    974984 Oct  6 23:47 agis_schedconf.cvmfs.json
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc   1560401 Oct  6 23:47 agis_ddmendpoints.agis.ALL.json
[2025-10-06 23:50:54] drwx------. 4 boinc boinc      4096 Oct  6 23:47 pilot3
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc       969 Oct  6 23:48 memory_monitor_summary.json
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc     20995 Oct  6 23:48 log.46376905._127635.job.log.tgz.1
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc      8408 Oct  6 23:50 heartbeat.json
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc       523 Oct  6 23:50 boinc_task_state.xml
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc      8192 Oct  6 23:50 boinc_mmap_file
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc        22 Oct  6 23:50 wrapper_checkpoint.txt
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc        95 Oct  6 23:50 pilot_heartbeat.json
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc       893 Oct  6 23:50 pilotlog.txt
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc     81489 Oct  6 23:50 log.46376905._127635.job.log.1
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc       188 Oct  6 23:50 output.list
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc       620 Oct  6 23:50 runtime_log
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc    122880 Oct  6 23:50 result.tar.gz
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc      8528 Oct  6 23:50 runtime_log.err
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc       646 Oct  6 23:50 RQFODmeGEQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT1VNDmi6bCRn.diag
[2025-10-06 23:50:54] -rw-r--r--. 1 boinc boinc     21612 Oct  6 23:50 stderr.txt
[2025-10-06 23:50:54] No HITS result produced
[2025-10-06 23:50:54]  *** Contents of shared directory: ***
[2025-10-06 23:50:54] total 208812
[2025-10-06 23:50:54] -rw-r--r--. 2 boinc boinc 213114141 Oct  6 23:47 ATLAS.root_0
[2025-10-06 23:50:54] -rw-r--r--. 2 boinc boinc     15120 Oct  6 23:47 start_atlas.sh
[2025-10-06 23:50:54] -rw-r--r--. 2 boinc boinc    565597 Oct  6 23:47 input.tar.gz
[2025-10-06 23:50:54] -rw-------. 1 boinc boinc    122880 Oct  6 23:50 result.tar.gz
23:50:55 (3807792): run_atlas exited; CPU time 20.943576
23:50:55 (3807792): called boinc_finish(0)

</stderr_txt>
]]>

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