Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:28:53 (3675435): wrapper (7.7.26015): starting
02:28:53 (3675435): wrapper: running run_atlas (--nthreads 11)
[2025-10-07 02:28:53] Arguments: --nthreads 11
[2025-10-07 02:28:53] Threads: 11
[2025-10-07 02:28:53] Checking for CVMFS
[2025-10-07 02:28:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 02:28:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 02:28:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 02:28:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 02:28:56] 2.13.2.0 317867 130438 633468 151425 3 1019 20910969 40960000 62283 16776704 0 356899016 99.820 156053635 31075 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-07 02:28:56] CVMFS is ok
[2025-10-07 02:28:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 02:28:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 02:28:56] Further information can be found at the LHC@home message board.
[2025-10-07 02:28:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 02:28:56] Checking for apptainer binary...
[2025-10-07 02:28:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 02:28:56] Running /usr/bin/apptainer --version
[2025-10-07 02:28:56] apptainer version 1.4.2-1.el9
[2025-10-07 02:28:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 02:28:57] c8-6-11.aglt2.org
[2025-10-07 02:28:57] apptainer works
[2025-10-07 02:28:57] Set ATHENA_PROC_NUMBER=11
[2025-10-07 02:28:57] Set ATHENA_CORE_NUMBER=11
[2025-10-07 02:28:57] Starting ATLAS job with PandaID=6832429454
[2025-10-07 02:28:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 03:46:22]  *** The last 200 lines of the pilot log: ***
[2025-10-07 03:46:22] 2025-10-07 07:45:17,584 | INFO     | time since job start (4511s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:18,199 | INFO     | monitor loop #278: job 0:6832429454 is in state 'finished'
[2025-10-07 03:46:22] 2025-10-07 07:45:18,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:46:22] 2025-10-07 07:45:20,615 | INFO     | PID=3687057 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 03:46:22] 2025-10-07 07:45:20,615 | INFO     | .. there are 86 such processes running
[2025-10-07 03:46:22] 2025-10-07 07:45:20,749 | INFO     | monitor loop #279: job 0:6832429454 is in state 'finished'
[2025-10-07 03:46:22] 2025-10-07 07:45:20,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:46:22] 2025-10-07 07:45:21,617 | INFO     | time since job start (4515s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:23,254 | INFO     | monitor loop #280: job 0:6832429454 is in state 'finished'
[2025-10-07 03:46:22] 2025-10-07 07:45:23,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:46:22] 2025-10-07 07:45:23,624 | INFO     | time since job start (4517s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:25,635 | INFO     | time since job start (4519s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:25,761 | INFO     | monitor loop #281: job 0:6832429454 is in state 'finished'
[2025-10-07 03:46:22] 2025-10-07 07:45:25,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:46:22] 2025-10-07 07:45:27,649 | INFO     | time since job start (4521s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:28,290 | INFO     | monitor loop #282: job 0:6832429454 is in state 'finished'
[2025-10-07 03:46:22] 2025-10-07 07:45:28,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:46:22] 2025-10-07 07:45:29,671 | INFO     | time since job start (4523s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:30,801 | INFO     | monitor loop #283: job 0:6832429454 is in state 'finished'
[2025-10-07 03:46:22] 2025-10-07 07:45:30,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:46:22] 2025-10-07 07:45:31,678 | INFO     | time since job start (4525s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:33,306 | INFO     | monitor loop #284: job 0:6832429454 is in state 'finished'
[2025-10-07 03:46:22] 2025-10-07 07:45:33,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:46:22] 2025-10-07 07:45:33,690 | INFO     | time since job start (4527s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:35,698 | INFO     | time since job start (4529s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:35,812 | INFO     | monitor loop #285: job 0:6832429454 is in state 'finished'
[2025-10-07 03:46:22] 2025-10-07 07:45:35,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:46:22] 2025-10-07 07:45:37,704 | INFO     | time since job start (4531s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:38,317 | INFO     | monitor loop #286: job 0:6832429454 is in state 'finished'
[2025-10-07 03:46:22] 2025-10-07 07:45:38,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:46:22] 2025-10-07 07:45:39,738 | INFO     | time since job start (4533s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:40,845 | INFO     | monitor loop #287: job 0:6832429454 is in state 'finished'
[2025-10-07 03:46:22] 2025-10-07 07:45:40,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:46:22] 2025-10-07 07:45:41,630 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 03:46:22] 2025-10-07 07:45:41,639 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1339921875033
[2025-10-07 03:46:22] 2025-10-07 07:45:41,667 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6832429454/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 03:46:22] 2025-10-07 07:45:41,667 | INFO     | extracted standard info from prmon json
[2025-10-07 03:46:22] 2025-10-07 07:45:41,667 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 03:46:22] 2025-10-07 07:45:41,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 03:46:22] 2025-10-07 07:45:41,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 03:46:22] 2025-10-07 07:45:41,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 03:46:22] 2025-10-07 07:45:41,668 | INFO     | fitting pss+swap vs Time
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | sum of square deviations: 85136480.0
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | sum of deviations: 2125880377.9999995
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | mean x: 1759821007.0
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | mean y: 2570847.2769230767
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | -- intersect: -43940624215.2098
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | intersect: -43940624215.2098
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | chi2: 0.5204368191352728
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | -- intersect: -43940624215.2098
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | current memory leak: 24.97 B/s (using 65 data points, chi2=0.52)
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | ..............................
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | . Timing measurements:
[2025-10-07 03:46:22] 2025-10-07 07:45:41,669 | INFO     | . get job = 0 s
[2025-10-07 03:46:22] 2025-10-07 07:45:41,673 | INFO     | . initial setup = 6 s
[2025-10-07 03:46:22] 2025-10-07 07:45:41,674 | INFO     | . payload setup = 40 s
[2025-10-07 03:46:22] 2025-10-07 07:45:41,674 | INFO     | . stage-in = 0 s
[2025-10-07 03:46:22] 2025-10-07 07:45:41,674 | INFO     | . payload execution = 4373 s
[2025-10-07 03:46:22] 2025-10-07 07:45:41,674 | INFO     | . stage-out = 2 s
[2025-10-07 03:46:22] 2025-10-07 07:45:41,674 | INFO     | . log creation = 0 s
[2025-10-07 03:46:22] 2025-10-07 07:45:41,674 | INFO     | ..............................
[2025-10-07 03:46:22] 2025-10-07 07:45:41,761 | INFO     | time since job start (4535s) is within the limit (172800.0s)
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | 
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | job summary report
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | --------------------------------------------------
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | PanDA job id: 6832429454
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | task id: 46376905
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | errors: (none)
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | pilot state: finished 
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | transexitcode: 0
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | exeerrorcode: 0
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | exeerrordiag: 
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | exitcode: 0
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | exitmsg: OK
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | cpuconsumptiontime: 20267 s
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | nevents: 400
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | neventsw: 0
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | pid: 3717570
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | pgrp: 3717570
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | corecount: 11
[2025-10-07 03:46:22] 2025-10-07 07:45:41,959 | INFO     | event service: False
[2025-10-07 03:46:22] 2025-10-07 07:45:41,960 | INFO     | sizes: {0: 2348820, 1: 2348820, 12: 2348848, 23: 2348876, 32: 2349166, 33: 2349194, 4418: 2375275, 4422: 2384273, 4424: 2384329, 4470: 2384523}
[2025-10-07 03:46:22] 2025-10-07 07:45:41,960 | INFO     | --------------------------------------------------
[2025-10-07 03:46:22] 2025-10-07 07:45:41,960 | INFO     | 
[2025-10-07 03:46:22] 2025-10-07 07:45:41,960 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-07 03:46:22] 2025-10-07 07:45:41,984 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,985 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 03:46:22] 2025-10-07 07:45:41,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 03:46:22] 2025-10-07 07:45:41,986 | INFO     | job 6832429454 has completed (purged errors)
[2025-10-07 03:46:22] 2025-10-07 07:45:41,986 | INFO     | overall cleanup function is called
[2025-10-07 03:46:22] 2025-10-07 07:45:43,008 | INFO     | --- collectZombieJob: --- 10, [3717570]
[2025-10-07 03:46:22] 2025-10-07 07:45:43,008 | INFO     | zombie collector waiting for pid 3717570
[2025-10-07 03:46:22] 2025-10-07 07:45:43,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 03:46:22] 2025-10-07 07:45:43,008 | INFO     | collected zombie processes
[2025-10-07 03:46:22] 2025-10-07 07:45:43,008 | INFO     | will attempt to kill all subprocesses of pid=3717570
[2025-10-07 03:46:22] 2025-10-07 07:45:47,189 | INFO     | PID=3687057 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 03:46:22] 2025-10-07 07:45:47,189 | INFO     | .. there are 86 such processes running
[2025-10-07 03:46:22] 2025-10-07 07:45:47,472 | INFO     | process IDs to be killed: [3717570] (in reverse order)
[2025-10-07 03:46:22] 2025-10-07 07:45:47,943 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 03:46:22] 2025-10-07 07:45:47,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 03:46:22] 2025-10-07 07:45:48,020 | INFO     | did not find any defunct processes belonging to 3717570
[2025-10-07 03:46:22] 2025-10-07 07:45:48,251 | INFO     | did not find any defunct processes belonging to 3717570
[2025-10-07 03:46:22] 2025-10-07 07:45:48,270 | INFO     | ready for new job
[2025-10-07 03:46:22] 2025-10-07 07:45:48,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 03:46:22] 2025-10-07 07:45:48,271 | INFO     | ***************************************
[2025-10-07 03:46:22] 2025-10-07 07:45:48,271 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 03:46:22] 2025-10-07 07:45:48,272 | INFO     | ***************************************
[2025-10-07 03:46:22] 2025-10-07 07:45:48,272 | INFO     | 
[2025-10-07 03:46:22] 2025-10-07 07:45:48,299 | INFO     | architecture information:
[2025-10-07 03:46:22] 2025-10-07 07:45:48,317 | INFO     | executing command: cat /etc/os-release
[2025-10-07 03:46:22] 2025-10-07 07:45:48,361 | INFO     | cat /etc/os-release:
[2025-10-07 03:46:22] NAME="CentOS Linux"
[2025-10-07 03:46:22] VERSION="7 (Core)"
[2025-10-07 03:46:22] ID="centos"
[2025-10-07 03:46:22] ID_LIKE="rhel fedora"
[2025-10-07 03:46:22] VERSION_ID="7"
[2025-10-07 03:46:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 03:46:22] ANSI_COLOR="0;31"
[2025-10-07 03:46:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 03:46:22] HOME_URL="https://www.centos.org/"
[2025-10-07 03:46:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 03:46:22] 
[2025-10-07 03:46:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 03:46:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 03:46:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 03:46:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 03:46:22] 
[2025-10-07 03:46:22] 2025-10-07 07:45:48,361 | INFO     | ***************************************
[2025-10-07 03:46:22] 2025-10-07 07:45:48,870 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-07 03:46:22] 2025-10-07 07:45:48,957 | INFO     | sufficient remaining disk space (169383821312 B)
[2025-10-07 03:46:22] 2025-10-07 07:45:48,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 03:46:22] 2025-10-07 07:45:48,957 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 03:46:22] 2025-10-07 07:45:48,957 | INFO     | update_server=False
[2025-10-07 03:46:22] 2025-10-07 07:45:48,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 03:46:22] 2025-10-07 07:45:49,209 | INFO     | all data control threads have been joined
[2025-10-07 03:46:22] 2025-10-07 07:45:49,209 | INFO     | all payload control threads have been joined
[2025-10-07 03:46:22] 2025-10-07 07:45:49,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 03:46:22] 2025-10-07 07:45:49,444 | INFO     | aborting loop
[2025-10-07 03:46:22] 2025-10-07 07:45:49,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 03:46:22] 2025-10-07 07:45:49,964 | INFO     | [job] retrieve thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:50,215 | INFO     | [data] control thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:50,215 | INFO     | [payload] control thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:50,274 | INFO     | all job control threads have been joined
[2025-10-07 03:46:22] 2025-10-07 07:45:50,306 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:50,451 | INFO     | [job] job monitor thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:50,453 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:50,768 | INFO     | [job] validate thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:50,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 03:46:22] 2025-10-07 07:45:50,811 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:50,976 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:51,241 | INFO     | [payload] validate_post thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:51,276 | INFO     | [payload] failed_post thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:51,280 | INFO     | [job] control thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:51,427 | INFO     | [data] copytool_in thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:51,669 | INFO     | [data] copytool_out thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:51,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 03:46:22] 2025-10-07 07:45:51,811 | INFO     | [job] queue monitor thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:45:55,823 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 03:46:22] 2025-10-07 07:46:13,540 | INFO     | [monitor] cgroup control has ended
[2025-10-07 03:46:22] 2025-10-07 07:46:14,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437606549312)>', '<ExcThread(monitor, started 140436966467328)>']
[2025-10-07 03:46:22] 2025-10-07 07:46:19,660 | INFO     | all workflow threads have been joined
[2025-10-07 03:46:22] 2025-10-07 07:46:19,660 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 03:46:22] 2025-10-07 07:46:19,660 | INFO     | traces error code: 0
[2025-10-07 03:46:22] 2025-10-07 07:46:19,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 03:46:22] 2025-10-07 07:46:20,746 | INFO     | PID=3687057 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 03:46:22] 2025-10-07 07:46:20,746 | INFO     | .. there are 86 such processes running
[2025-10-07 03:46:22] 2025-10-07 07:46:20,746 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 03:46:22] 2025-10-07 07:46:20,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 03:46:22] 2025-10-07 07:46:20,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 03:46:22] 2025-10-07 07:46:20,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 03:46:22] 2025-10-07 07:46:20,746 | INFO     | [monitor] control thread has ended
[2025-10-07 03:46:22] 2025-10-07 07:46:21,025 [wrapper] ==== pilot stdout END ====
[2025-10-07 03:46:22] 2025-10-07 07:46:21,044 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 03:46:22] 2025-10-07 07:46:21,058 [wrapper] pilotpid: 3687057
[2025-10-07 03:46:22] 2025-10-07 07:46:21,103 [wrapper] Pilot exit status: 0
[2025-10-07 03:46:22] 2025-10-07 07:46:21,167 [wrapper] pandaids: 6832429454
[2025-10-07 03:46:22] 2025-10-07 07:46:21,503 [wrapper] cleanup supervisor_pilot  257225 3687058
[2025-10-07 03:46:22] 2025-10-07 07:46:21,520 [wrapper] Test setup, not cleaning
[2025-10-07 03:46:22] 2025-10-07 07:46:21,541 [wrapper] apfmon messages muted
[2025-10-07 03:46:22] 2025-10-07 07:46:21,563 [wrapper] ==== wrapper stdout END ====
[2025-10-07 03:46:22] 2025-10-07 07:46:21,584 [wrapper] ==== wrapper stderr END ====
[2025-10-07 03:46:22]  *** Error codes and diagnostics ***
[2025-10-07 03:46:22]     "exeErrorCode": 0,
[2025-10-07 03:46:22]     "exeErrorDiag": "",
[2025-10-07 03:46:22]     "pilotErrorCode": 0,
[2025-10-07 03:46:22]     "pilotErrorDiag": "",
[2025-10-07 03:46:22]  *** Listing of results directory ***
[2025-10-07 03:46:22] total 390220
[2025-10-07 03:46:22] -rwx------. 1 boincer umatlas     36292 Oct  6 04:54 runpilot2-wrapper.sh
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 04:54 pilot3.tar.gz
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 04:54 queuedata.json
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas       100 Oct  7 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 03:46:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  7 02:28 run_atlas
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas       105 Oct  7 02:28 job.xml
[2025-10-07 03:46:22] -rw-r--r--. 2 boincer umatlas 212354282 Oct  7 02:28 EVNT.46376901._004024.pool.root.1
[2025-10-07 03:46:22] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 02:28 start_atlas.sh
[2025-10-07 03:46:22] drwxrwx--x. 2 boincer umatlas      4096 Oct  7 02:28 shared
[2025-10-07 03:46:22] -rw-r--r--. 2 boincer umatlas    565596 Oct  7 02:28 input.tar.gz
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas         0 Oct  7 02:28 boinc_lockfile
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas      2521 Oct  7 02:28 pandaJob.out
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas    974984 Oct  7 02:30 agis_schedconf.cvmfs.json
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas   1560401 Oct  7 02:30 agis_ddmendpoints.agis.ALL.json
[2025-10-07 03:46:22] drwx------. 4 boincer umatlas      4096 Oct  7 02:30 pilot3
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas      7162 Oct  7 03:38 init_data.xml
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas 181480174 Oct  7 03:43 HITS.46376905._108480.pool.root.1
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas       530 Oct  7 03:43 boinc_task_state.xml
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas      1048 Oct  7 03:44 memory_monitor_summary.json
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas    355814 Oct  7 03:44 log.46376905._108480.job.log.tgz.1
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas      7801 Oct  7 03:45 heartbeat.json
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas        95 Oct  7 03:45 pilot_heartbeat.json
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas       823 Oct  7 03:46 pilotlog.txt
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas    580299 Oct  7 03:46 log.46376905._108480.job.log.1
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas      8192 Oct  7 03:46 boinc_mmap_file
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas       357 Oct  7 03:46 output.list
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas        27 Oct  7 03:46 wrapper_checkpoint.txt
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas       620 Oct  7 03:46 runtime_log
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas    952320 Oct  7 03:46 result.tar.gz
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas      8700 Oct  7 03:46 runtime_log.err
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas       656 Oct  7 03:46 95ZLDmZAwP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXtIMDm3Mh02m.diag
[2025-10-07 03:46:22] -rw-r--r--. 1 boincer umatlas     20655 Oct  7 03:46 stderr.txt
[2025-10-07 03:46:22] HITS file was successfully produced:
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas 181480174 Oct  7 03:43 shared/HITS.pool.root.1
[2025-10-07 03:46:22]  *** Contents of shared directory: ***
[2025-10-07 03:46:22] total 386116
[2025-10-07 03:46:22] -rw-r--r--. 2 boincer umatlas 212354282 Oct  7 02:28 ATLAS.root_0
[2025-10-07 03:46:22] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 02:28 start_atlas.sh
[2025-10-07 03:46:22] -rw-r--r--. 2 boincer umatlas    565596 Oct  7 02:28 input.tar.gz
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas 181480174 Oct  7 03:43 HITS.pool.root.1
[2025-10-07 03:46:22] -rw-------. 1 boincer umatlas    952320 Oct  7 03:46 result.tar.gz
03:46:24 (3675435): run_atlas exited; CPU time 20415.489490
03:46:24 (3675435): called boinc_finish(0)

</stderr_txt>
]]>

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