Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:54:16 (21989): wrapper (7.7.26015): starting
15:54:16 (21989): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 15:54:16] Arguments: --nthreads 8
[2025-10-07 15:54:16] Threads: 8
[2025-10-07 15:54:16] Checking for CVMFS
[2025-10-07 15:54:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 15:54:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 15:54:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 15:54:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 15:54:20] 2.11.2.0 6199 213491 138416 151434 3 65 17295737 25165824 4632 130560 0 152383718 99.912 63537298 3134 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 15:54:20] CVMFS is ok
[2025-10-07 15:54:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 15:54:20] Checking for apptainer binary...
[2025-10-07 15:54:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 15:54:20] Running /usr/bin/apptainer --version
[2025-10-07 15:54:20] apptainer version 1.3.2-1.el7
[2025-10-07 15:54:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 15:54:30] cg-vwn228.simple-grid.lan
[2025-10-07 15:54:30] apptainer works
[2025-10-07 15:54:30] Set ATHENA_PROC_NUMBER=8
[2025-10-07 15:54:30] Set ATHENA_CORE_NUMBER=8
[2025-10-07 15:54:30] Starting ATLAS job with PandaID=6833161641
[2025-10-07 15:54:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 19:44:33]  *** The last 200 lines of the pilot log: ***
[2025-10-07 19:44:33] 2025-10-07 17:43:37,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 19:44:33] 2025-10-07 17:43:37,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 19:44:33] 2025-10-07 17:43:37,103 | INFO     | fitting pss+swap vs Time
[2025-10-07 19:44:33] 2025-10-07 17:43:37,104 | INFO     | sum of square deviations: 2996454322.0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,106 | INFO     | sum of deviations: 88463708652.0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,106 | INFO     | mean x: 1759852416.0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,106 | INFO     | mean y: 2415099.5821596244
[2025-10-07 19:44:33] 2025-10-07 17:43:37,106 | INFO     | -- intersect: -51953348169.197044
[2025-10-07 19:44:33] 2025-10-07 17:43:37,106 | INFO     | intersect: -51953348169.197044
[2025-10-07 19:44:33] 2025-10-07 17:43:37,106 | INFO     | chi2: 6.966463501521961
[2025-10-07 19:44:33] 2025-10-07 17:43:37,107 | INFO     | sum of square deviations: 2790348132.0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,108 | INFO     | sum of deviations: 100410471910.00002
[2025-10-07 19:44:33] 2025-10-07 17:43:37,109 | INFO     | mean x: 1759852263.5
[2025-10-07 19:44:33] 2025-10-07 17:43:37,109 | INFO     | mean y: 2423741.7115384615
[2025-10-07 19:44:33] 2025-10-07 17:43:37,109 | INFO     | -- intersect: -63325730277.2855
[2025-10-07 19:44:33] 2025-10-07 17:43:37,109 | INFO     | intersect: -63325730277.2855
[2025-10-07 19:44:33] 2025-10-07 17:43:37,109 | INFO     | chi2: 6.253324409251712
[2025-10-07 19:44:33] 2025-10-07 17:43:37,110 | INFO     | current chi2=6.253324409251712 (change=10.236744829201358 %)
[2025-10-07 19:44:33] 2025-10-07 17:43:37,110 | INFO     | right removable region: 207
[2025-10-07 19:44:33] 2025-10-07 17:43:37,110 | INFO     | sum of square deviations: 2790348132.0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,111 | INFO     | sum of deviations: 17340922681.000008
[2025-10-07 19:44:33] 2025-10-07 17:43:37,112 | INFO     | mean x: 1759852568.5
[2025-10-07 19:44:33] 2025-10-07 17:43:37,112 | INFO     | mean y: 2467675.8365384615
[2025-10-07 19:44:33] 2025-10-07 17:43:37,112 | INFO     | -- intersect: -10934327977.128878
[2025-10-07 19:44:33] 2025-10-07 17:43:37,112 | INFO     | intersect: -10934327977.128878
[2025-10-07 19:44:33] 2025-10-07 17:43:37,112 | INFO     | chi2: 2.3603322239941806
[2025-10-07 19:44:33] 2025-10-07 17:43:37,112 | INFO     | current chi2=2.3603322239941806 (change=66.1186450847188 %)
[2025-10-07 19:44:33] 2025-10-07 17:43:37,113 | INFO     | sum of square deviations: 2593916542.0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,114 | INFO     | sum of deviations: -21942339341.0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,115 | INFO     | mean x: 1759852721.0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,115 | INFO     | mean y: 2498017.5467980294
[2025-10-07 19:44:33] 2025-10-07 17:43:37,115 | INFO     | -- intersect: 14889363099.408865
[2025-10-07 19:44:33] 2025-10-07 17:43:37,115 | INFO     | intersect: 14889363099.408865
[2025-10-07 19:44:33] 2025-10-07 17:43:37,115 | INFO     | chi2: 0.8614013420240102
[2025-10-07 19:44:33] 2025-10-07 17:43:37,115 | INFO     | current chi2=0.8614013420240102 (change=63.50508062944049 %)
[2025-10-07 19:44:33] 2025-10-07 17:43:37,116 | INFO     | sum of square deviations: 2406926989.5
[2025-10-07 19:44:33] 2025-10-07 17:43:37,117 | INFO     | sum of deviations: -26912587285.500004
[2025-10-07 19:44:33] 2025-10-07 17:43:37,117 | INFO     | mean x: 1759852873.5
[2025-10-07 19:44:33] 2025-10-07 17:43:37,117 | INFO     | mean y: 2502014.1464646463
[2025-10-07 19:44:33] 2025-10-07 17:43:37,118 | INFO     | -- intersect: 19679955578.097515
[2025-10-07 19:44:33] 2025-10-07 17:43:37,118 | INFO     | intersect: 19679955578.097515
[2025-10-07 19:44:33] 2025-10-07 17:43:37,118 | INFO     | chi2: 0.8057790883522886
[2025-10-07 19:44:33] 2025-10-07 17:43:37,118 | INFO     | current chi2=0.8057790883522886 (change=6.457182147061387 %)
[2025-10-07 19:44:33] 2025-10-07 17:43:37,118 | INFO     | left removable region: 30
[2025-10-07 19:44:33] 2025-10-07 17:43:37,119 | INFO     | sum of square deviations: 1719429448.0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,120 | INFO     | sum of deviations: -11337420105.999994
[2025-10-07 19:44:33] 2025-10-07 17:43:37,120 | INFO     | mean x: 1759853148.0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,120 | INFO     | mean y: 2511951.6101694917
[2025-10-07 19:44:33] 2025-10-07 17:43:37,120 | INFO     | -- intersect: 11606474235.116777
[2025-10-07 19:44:33] 2025-10-07 17:43:37,120 | INFO     | intersect: 11606474235.116777
[2025-10-07 19:44:33] 2025-10-07 17:43:37,121 | INFO     | chi2: 0.014473702795977504
[2025-10-07 19:44:33] 2025-10-07 17:43:37,121 | INFO     | -- intersect: 11606474235.116777
[2025-10-07 19:44:33] 2025-10-07 17:43:37,121 | INFO     | current memory leak: -6.59 B/s (using 177 data points, chi2=0.01)
[2025-10-07 19:44:33] 2025-10-07 17:43:37,122 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-07 19:44:33] 2025-10-07 17:43:37,122 | INFO     | ..............................
[2025-10-07 19:44:33] 2025-10-07 17:43:37,122 | INFO     | . Timing measurements:
[2025-10-07 19:44:33] 2025-10-07 17:43:37,122 | INFO     | . get job = 0 s
[2025-10-07 19:44:33] 2025-10-07 17:43:37,122 | INFO     | . initial setup = 9 s
[2025-10-07 19:44:33] 2025-10-07 17:43:37,122 | INFO     | . payload setup = 122 s
[2025-10-07 19:44:33] 2025-10-07 17:43:37,122 | INFO     | . stage-in = 0 s
[2025-10-07 19:44:33] 2025-10-07 17:43:37,122 | INFO     | . payload execution = 13124 s
[2025-10-07 19:44:33] 2025-10-07 17:43:37,122 | INFO     | . stage-out = 4 s
[2025-10-07 19:44:33] 2025-10-07 17:43:37,122 | INFO     | . log creation = 1 s
[2025-10-07 19:44:33] 2025-10-07 17:43:37,123 | INFO     | ..............................
[2025-10-07 19:44:33] 2025-10-07 17:43:37,239 | INFO     | 
[2025-10-07 19:44:33] 2025-10-07 17:43:37,240 | INFO     | job summary report
[2025-10-07 19:44:33] 2025-10-07 17:43:37,240 | INFO     | --------------------------------------------------
[2025-10-07 19:44:33] 2025-10-07 17:43:37,240 | INFO     | PanDA job id: 6833161641
[2025-10-07 19:44:33] 2025-10-07 17:43:37,240 | INFO     | task id: 46376905
[2025-10-07 19:44:33] 2025-10-07 17:43:37,240 | INFO     | errors: (none)
[2025-10-07 19:44:33] 2025-10-07 17:43:37,240 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 19:44:33] 2025-10-07 17:43:37,240 | INFO     | pilot state: finished 
[2025-10-07 19:44:33] 2025-10-07 17:43:37,240 | INFO     | transexitcode: 0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,241 | INFO     | exeerrorcode: 0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,241 | INFO     | exeerrordiag: 
[2025-10-07 19:44:33] 2025-10-07 17:43:37,241 | INFO     | exitcode: 0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,241 | INFO     | exitmsg: OK
[2025-10-07 19:44:33] 2025-10-07 17:43:37,241 | INFO     | cpuconsumptiontime: 49248 s
[2025-10-07 19:44:33] 2025-10-07 17:43:37,241 | INFO     | nevents: 400
[2025-10-07 19:44:33] 2025-10-07 17:43:37,241 | INFO     | neventsw: 0
[2025-10-07 19:44:33] 2025-10-07 17:43:37,241 | INFO     | pid: 32316
[2025-10-07 19:44:33] 2025-10-07 17:43:37,241 | INFO     | pgrp: 32316
[2025-10-07 19:44:33] 2025-10-07 17:43:37,241 | INFO     | corecount: 8
[2025-10-07 19:44:33] 2025-10-07 17:43:37,242 | INFO     | event service: False
[2025-10-07 19:44:33] 2025-10-07 17:43:37,242 | INFO     | sizes: {0: 2347992, 1: 2348678, 2: 2348877, 13: 2348877, 23: 2348933, 34: 2348961, 45: 2349117, 56: 2349145, 66: 2349173, 77: 2349201, 88: 2349257, 89: 2349827, 99
[2025-10-07 19:44:33] 2025-10-07 17:43:37,242 | INFO     | --------------------------------------------------
[2025-10-07 19:44:33] 2025-10-07 17:43:37,242 | INFO     | 
[2025-10-07 19:44:33] 2025-10-07 17:43:37,242 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-10-07 19:44:33] 2025-10-07 17:43:37,792 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,792 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,792 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,792 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,793 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,793 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,794 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,794 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 19:44:33] 2025-10-07 17:43:37,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,794 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 19:44:33] 2025-10-07 17:43:37,794 | INFO     | job 6833161641 has completed (purged errors)
[2025-10-07 19:44:33] 2025-10-07 17:43:37,794 | INFO     | overall cleanup function is called
[2025-10-07 19:44:33] 2025-10-07 17:43:38,803 | INFO     | --- collectZombieJob: --- 10, [32316]
[2025-10-07 19:44:33] 2025-10-07 17:43:38,803 | INFO     | zombie collector waiting for pid 32316
[2025-10-07 19:44:33] 2025-10-07 17:43:38,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 19:44:33] 2025-10-07 17:43:38,804 | INFO     | collected zombie processes
[2025-10-07 19:44:33] 2025-10-07 17:43:38,804 | INFO     | will attempt to kill all subprocesses of pid=32316
[2025-10-07 19:44:33] 2025-10-07 17:43:38,924 | INFO     | process IDs to be killed: [32316] (in reverse order)
[2025-10-07 19:44:33] 2025-10-07 17:43:39,420 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 19:44:33] 2025-10-07 17:43:39,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 19:44:33] 2025-10-07 17:43:39,424 | INFO     | did not find any defunct processes belonging to 32316
[2025-10-07 19:44:33] 2025-10-07 17:43:39,427 | INFO     | did not find any defunct processes belonging to 32316
[2025-10-07 19:44:33] 2025-10-07 17:43:39,427 | INFO     | ready for new job
[2025-10-07 19:44:33] 2025-10-07 17:43:39,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 19:44:33] 2025-10-07 17:43:39,430 | INFO     | ***************************************
[2025-10-07 19:44:33] 2025-10-07 17:43:39,430 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 19:44:33] 2025-10-07 17:43:39,430 | INFO     | ***************************************
[2025-10-07 19:44:33] 2025-10-07 17:43:39,430 | INFO     | 
[2025-10-07 19:44:33] 2025-10-07 17:43:39,431 | INFO     | pilot is running in a VM
[2025-10-07 19:44:33] 2025-10-07 17:43:39,431 | INFO     | architecture information:
[2025-10-07 19:44:33] 2025-10-07 17:43:39,442 | INFO     | executing command: cat /etc/os-release
[2025-10-07 19:44:33] 2025-10-07 17:43:39,721 | INFO     | cat /etc/os-release:
[2025-10-07 19:44:33] NAME="CentOS Linux"
[2025-10-07 19:44:33] VERSION="7 (Core)"
[2025-10-07 19:44:33] ID="centos"
[2025-10-07 19:44:33] ID_LIKE="rhel fedora"
[2025-10-07 19:44:33] VERSION_ID="7"
[2025-10-07 19:44:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 19:44:33] ANSI_COLOR="0;31"
[2025-10-07 19:44:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 19:44:33] HOME_URL="https://www.centos.org/"
[2025-10-07 19:44:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 19:44:33] 
[2025-10-07 19:44:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 19:44:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 19:44:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 19:44:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 19:44:33] 
[2025-10-07 19:44:33] 2025-10-07 17:43:39,721 | INFO     | ***************************************
[2025-10-07 19:44:33] 2025-10-07 17:43:40,224 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-10-07 19:44:33] 2025-10-07 17:43:40,388 | INFO     | sufficient remaining disk space (495847473152 B)
[2025-10-07 19:44:33] 2025-10-07 17:43:40,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 19:44:33] 2025-10-07 17:43:40,388 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 19:44:33] 2025-10-07 17:43:40,389 | INFO     | update_server=False
[2025-10-07 19:44:33] 2025-10-07 17:43:40,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 19:44:33] 2025-10-07 17:43:40,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 19:44:33] 2025-10-07 17:43:40,389 | INFO     | aborting loop
[2025-10-07 19:44:33] 2025-10-07 17:43:40,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 19:44:33] 2025-10-07 17:43:40,611 | INFO     | all data control threads have been joined
[2025-10-07 19:44:33] 2025-10-07 17:43:41,160 | INFO     | all payload control threads have been joined
[2025-10-07 19:44:33] 2025-10-07 17:43:41,327 | INFO     | all job control threads have been joined
[2025-10-07 19:44:33] 2025-10-07 17:43:41,394 | INFO     | [job] retrieve thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:41,395 | INFO     | [job] job monitor thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:41,617 | INFO     | [data] control thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:41,698 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:41,842 | INFO     | [payload] validate_post thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:41,945 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:42,167 | INFO     | [payload] control thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:42,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 19:44:33] 2025-10-07 17:43:42,293 | INFO     | [payload] failed_post thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:42,333 | INFO     | [job] control thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:42,337 | INFO     | [data] copytool_in thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:42,406 | INFO     | [data] copytool_out thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:42,489 | INFO     | [job] validate thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:42,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:42,836 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:43,260 | INFO     | [job] queue monitor thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:43:43,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 19:44:33] 2025-10-07 17:43:47,499 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 19:44:33] 2025-10-07 17:44:09,878 | INFO     | PID=25772 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 19:44:33] 2025-10-07 17:44:09,878 | INFO     | .. there are 9 such processes running
[2025-10-07 19:44:33] 2025-10-07 17:44:09,878 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 19:44:33] 2025-10-07 17:44:09,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 19:44:33] 2025-10-07 17:44:09,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 19:44:33] 2025-10-07 17:44:22,585 | INFO     | [monitor] cgroup control has ended
[2025-10-07 19:44:33] 2025-10-07 17:44:23,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140331351168832)>', '<ExcThread(monitor, started 140330900891392)>']
[2025-10-07 19:44:33] 2025-10-07 17:44:23,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 19:44:33] 2025-10-07 17:44:23,962 | INFO     | [monitor] control thread has ended
[2025-10-07 19:44:33] 2025-10-07 17:44:28,257 | INFO     | all workflow threads have been joined
[2025-10-07 19:44:33] 2025-10-07 17:44:28,257 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 19:44:33] 2025-10-07 17:44:28,258 | INFO     | traces error code: 0
[2025-10-07 19:44:33] 2025-10-07 17:44:28,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 19:44:33] 2025-10-07 17:44:28,583 [wrapper] ==== pilot stdout END ====
[2025-10-07 19:44:33] 2025-10-07 17:44:28,669 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 19:44:33] 2025-10-07 17:44:28,741 [wrapper] pilotpid: 25772
[2025-10-07 19:44:33] 2025-10-07 17:44:28,851 [wrapper] Pilot exit status: 0
[2025-10-07 19:44:33] 2025-10-07 17:44:29,321 [wrapper] pandaids: 6833161641
[2025-10-07 19:44:33] 2025-10-07 17:44:30,158 [wrapper] cleanup supervisor_pilot 25588 25774
[2025-10-07 19:44:33] 2025-10-07 17:44:30,195 [wrapper] Test setup, not cleaning
[2025-10-07 19:44:33] 2025-10-07 17:44:30,239 [wrapper] apfmon messages muted
[2025-10-07 19:44:33] 2025-10-07 17:44:30,312 [wrapper] ==== wrapper stdout END ====
[2025-10-07 19:44:33] 2025-10-07 17:44:30,349 [wrapper] ==== wrapper stderr END ====
[2025-10-07 19:44:33]  *** Error codes and diagnostics ***
[2025-10-07 19:44:33]     "exeErrorCode": 0,
[2025-10-07 19:44:33]     "exeErrorDiag": "",
[2025-10-07 19:44:33]     "pilotErrorCode": 0,
[2025-10-07 19:44:33]     "pilotErrorDiag": "",
[2025-10-07 19:44:33]  *** Listing of results directory ***
[2025-10-07 19:44:33] total 397468
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc    552446 Oct  7 03:39 pilot3.tar.gz
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc      5112 Oct  7 03:42 queuedata.json
[2025-10-07 19:44:33] -rwx------. 1 boinc boinc     36292 Oct  7 03:42 runpilot2-wrapper.sh
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc       100 Oct  7 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 19:44:33] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 15:54 run_atlas
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc       105 Oct  7 15:54 job.xml
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc      6391 Oct  7 15:54 init_data.xml
[2025-10-07 19:44:33] -rw-r--r--. 2 boinc boinc 216510889 Oct  7 15:54 EVNT.46376901._004648.pool.root.1
[2025-10-07 19:44:33] -rw-r--r--. 2 boinc boinc     15120 Oct  7 15:54 start_atlas.sh
[2025-10-07 19:44:33] drwxrwx--x. 2 boinc boinc        68 Oct  7 15:54 shared
[2025-10-07 19:44:33] -rw-r--r--. 2 boinc boinc    565600 Oct  7 15:54 input.tar.gz
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc         0 Oct  7 15:54 boinc_lockfile
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc      2521 Oct  7 15:54 pandaJob.out
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc    975010 Oct  7 15:57 agis_schedconf.cvmfs.json
[2025-10-07 19:44:33] drwx------. 4 boinc boinc      4096 Oct  7 15:58 pilot3
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc 182118667 Oct  7 19:40 HITS.46376905._125144.pool.root.1
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc       531 Oct  7 19:41 boinc_task_state.xml
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc      1013 Oct  7 19:41 memory_monitor_summary.json
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc   1560401 Oct  7 19:42 agis_ddmendpoints.agis.ALL.json
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc    444879 Oct  7 19:42 log.46376905._125144.job.log.tgz.1
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc        95 Oct  7 19:43 pilot_heartbeat.json
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc      7784 Oct  7 19:43 heartbeat.json
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc      8192 Oct  7 19:44 boinc_mmap_file
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc        28 Oct  7 19:44 wrapper_checkpoint.txt
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc      4885 Oct  7 19:44 pilotlog.txt
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc   1805631 Oct  7 19:44 log.46376905._125144.job.log.1
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc       357 Oct  7 19:44 output.list
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc       620 Oct  7 19:44 runtime_log
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc   2273280 Oct  7 19:44 result.tar.gz
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc      8717 Oct  7 19:44 runtime_log.err
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc       657 Oct  7 19:44 cvLKDmetBQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVhKMDmogFBJm.diag
[2025-10-07 19:44:33] -rw-r--r--. 1 boinc boinc     20623 Oct  7 19:44 stderr.txt
[2025-10-07 19:44:33] HITS file was successfully produced:
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc 182118667 Oct  7 19:40 shared/HITS.pool.root.1
[2025-10-07 19:44:33]  *** Contents of shared directory: ***
[2025-10-07 19:44:33] total 392084
[2025-10-07 19:44:33] -rw-r--r--. 2 boinc boinc 216510889 Oct  7 15:54 ATLAS.root_0
[2025-10-07 19:44:33] -rw-r--r--. 2 boinc boinc     15120 Oct  7 15:54 start_atlas.sh
[2025-10-07 19:44:33] -rw-r--r--. 2 boinc boinc    565600 Oct  7 15:54 input.tar.gz
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc 182118667 Oct  7 19:40 HITS.pool.root.1
[2025-10-07 19:44:33] -rw-------. 1 boinc boinc   2273280 Oct  7 19:44 result.tar.gz
19:44:34 (21989): run_atlas exited; CPU time 49431.463276
19:44:34 (21989): called boinc_finish(0)

</stderr_txt>
]]>

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