Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:20:40 (3965583): wrapper (7.7.26015): starting
08:20:40 (3965583): wrapper: running run_atlas (--nthreads 2)
[2025-10-07 08:20:40] Arguments: --nthreads 2
[2025-10-07 08:20:40] Threads: 2
[2025-10-07 08:20:40] Checking for CVMFS
[2025-10-07 08:20:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 08:20:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 08:20:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 08:20:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 08:20:42] 2.11.0.0 3936297 9 37936 151425 2 186 3753403 4194304 0 130560 0 91188 100.000 1 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 08:20:42] CVMFS is ok
[2025-10-07 08:20:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 08:20:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 08:20:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 08:20:42] Further information can be found at the LHC@home message board.
[2025-10-07 08:20:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 08:20:42] Checking for apptainer binary...
[2025-10-07 08:20:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 08:20:42] Running /usr/bin/apptainer --version
[2025-10-07 08:20:43] apptainer version 1.2.2-1.el8
[2025-10-07 08:20:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 08:20:44] bottom
[2025-10-07 08:20:44] apptainer works
[2025-10-07 08:20:44] Set ATHENA_PROC_NUMBER=2
[2025-10-07 08:20:44] Set ATHENA_CORE_NUMBER=2
[2025-10-07 08:20:44] Starting ATLAS job with PandaID=6833159355
[2025-10-07 08:20:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 08:29:11]  *** The last 200 lines of the pilot log: ***
[2025-10-07 08:29:11] 2025-10-07 06:28:27,961 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6833159355/memory_monitor_output.txt
[2025-10-07 08:29:11] 2025-10-07 06:28:27,961 | INFO     | memory summary dictionary not yet available
[2025-10-07 08:29:11] 2025-10-07 06:28:27,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 08:29:11] 2025-10-07 06:28:27,962 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | could have reported an average CPU frequency of 1876 MHz (4 samples)
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | ..............................
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . Timing measurements:
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . get job = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . initial setup = 3 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . payload setup = 10 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . stage-in = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . payload execution = 218 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . stage-out = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . log creation = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | ..............................
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-07 08:29:11] 2025-10-07 06:28:27,965 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6833159355/pilotlog.txt
[2025-10-07 08:29:11] 2025-10-07 06:28:27,983 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-07 08:29:11] - Log from pilotlog.txt -
[2025-10-07 08:29:11] 2025-10-07 06:28:27,759 | INFO     | time since job start (442s) is within the limit (172800.0s)
[2025-10-07 08:29:11] 2025-10-07 06:28:27,958 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-07 08:29:11] 2025-10-07 06:28:27,960 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.2675
[2025-10-07 08:29:11] 2025-10-07 06:28:27,961 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6833159355/memory_monitor_output.txt
[2025-10-07 08:29:11] 2025-10-07 06:28:27,961 | INFO     | memory summary dictionary not yet available
[2025-10-07 08:29:11] 2025-10-07 06:28:27,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 08:29:11] 2025-10-07 06:28:27,962 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | could have reported an average CPU frequency of 1876 MHz (4 samples)
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | ..............................
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . Timing measurements:
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . get job = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . initial setup = 3 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . payload setup = 10 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . stage-in = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . payload execution = 218 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . stage-out = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . log creation = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | ..............................
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-07 08:29:11] 2025-10-07 06:28:27,965 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6833159355/pilotlog.txt
[2025-10-07 08:29:11] 2025-10-07 06:28:27,984 | WARNING  | 
[2025-10-07 08:29:11] [begin log extracts]
[2025-10-07 08:29:11] - Log from pilotlog.txt -
[2025-10-07 08:29:11] 2025-10-07 06:28:27,759 | INFO     | time since job start (442s) is within the limit (172800.0s)
[2025-10-07 08:29:11] 2025-10-07 06:28:27,958 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-07 08:29:11] 2025-10-07 06:28:27,960 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.2675
[2025-10-07 08:29:11] 2025-10-07 06:28:27,961 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6833159355/memory_monitor_output.txt
[2025-10-07 08:29:11] 2025-10-07 06:28:27,961 | INFO     | memory summary dictionary not yet available
[2025-10-07 08:29:11] 2025-10-07 06:28:27,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 08:29:11] 2025-10-07 06:28:27,962 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | could have reported an average CPU frequency of 1876 MHz (4 samples)
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | ..............................
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . Timing measurements:
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . get job = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . initial setup = 3 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,963 | INFO     | . payload setup = 10 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . stage-in = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . payload execution = 218 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . stage-out = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | . log creation = 0 s
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | ..............................
[2025-10-07 08:29:11] 2025-10-07 06:28:27,964 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-07 08:29:11] 2025-10-07 06:28:27,965 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6833159355/pilotlog.txt
[2025-10-07 08:29:11] [end log extracts]
[2025-10-07 08:29:11] 2025-10-07 06:28:27,984 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-07 08:29:11] 2025-10-07 06:28:27,985 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-07 08:29:11] 2025-10-07 06:28:28,131 | INFO     | 
[2025-10-07 08:29:11] 2025-10-07 06:28:28,131 | INFO     | job summary report
[2025-10-07 08:29:11] 2025-10-07 06:28:28,131 | INFO     | --------------------------------------------------
[2025-10-07 08:29:11] 2025-10-07 06:28:28,131 | INFO     | PanDA job id: 6833159355
[2025-10-07 08:29:11] 2025-10-07 06:28:28,132 | INFO     | task id: 46376905
[2025-10-07 08:29:11] 2025-10-07 06:28:28,132 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-07 08:25:06,379 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-07 08:29:11] 2025-10-07 06:28:28,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 08:29:11] 2025-10-07 06:28:28,132 | INFO     | pilot state: failed 
[2025-10-07 08:29:11] 2025-10-07 06:28:28,132 | INFO     | transexitcode: 65
[2025-10-07 08:29:11] 2025-10-07 06:28:28,132 | INFO     | exeerrorcode: 65
[2025-10-07 08:29:11] 2025-10-07 06:28:28,132 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-07 08:29:11] 2025-10-07 06:28:28,133 | INFO     | exitcode: 65
[2025-10-07 08:29:11] 2025-10-07 06:28:28,133 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-07 08:29:11] 2025-10-07 06:28:28,133 | INFO     | cpuconsumptiontime: 150 s
[2025-10-07 08:29:11] 2025-10-07 06:28:28,133 | INFO     | nevents: 0
[2025-10-07 08:29:11] 2025-10-07 06:28:28,133 | INFO     | neventsw: 0
[2025-10-07 08:29:11] 2025-10-07 06:28:28,133 | INFO     | pid: 3975713
[2025-10-07 08:29:11] 2025-10-07 06:28:28,133 | INFO     | pgrp: 3975713
[2025-10-07 08:29:11] 2025-10-07 06:28:28,134 | INFO     | corecount: 2
[2025-10-07 08:29:11] 2025-10-07 06:28:28,134 | INFO     | event service: False
[2025-10-07 08:29:11] 2025-10-07 06:28:28,134 | INFO     | sizes: {0: 2348649, 1: 2348848, 7: 2349110, 12: 2349138, 292: 2372512, 294: 2376991, 424: 2377129}
[2025-10-07 08:29:11] 2025-10-07 06:28:28,134 | INFO     | --------------------------------------------------
[2025-10-07 08:29:11] 2025-10-07 06:28:28,134 | INFO     | 
[2025-10-07 08:29:11] 2025-10-07 06:28:28,134 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-07 08:29:11] 2025-10-07 06:28:28,161 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,161 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,161 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,162 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,162 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,162 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,162 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,162 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 08:29:11] 2025-10-07 06:28:28,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,164 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 08:29:11] 2025-10-07 06:28:28,164 | INFO     | job 6833159355 has completed (purged errors)
[2025-10-07 08:29:11] 2025-10-07 06:28:28,164 | INFO     | overall cleanup function is called
[2025-10-07 08:29:11] 2025-10-07 06:28:28,859 | INFO     | PID=3969207 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 08:29:11] 2025-10-07 06:28:29,219 | INFO     | --- collectZombieJob: --- 10, [3975713]
[2025-10-07 08:29:11] 2025-10-07 06:28:29,219 | INFO     | zombie collector waiting for pid 3975713
[2025-10-07 08:29:11] 2025-10-07 06:28:29,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 08:29:11] 2025-10-07 06:28:29,219 | INFO     | collected zombie processes
[2025-10-07 08:29:11] 2025-10-07 06:28:29,219 | INFO     | will attempt to kill all subprocesses of pid=3975713
[2025-10-07 08:29:11] 2025-10-07 06:28:29,292 | INFO     | process IDs to be killed: [3975713] (in reverse order)
[2025-10-07 08:29:11] 2025-10-07 06:28:29,339 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 08:29:11] 2025-10-07 06:28:29,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 08:29:11] 2025-10-07 06:28:29,342 | INFO     | did not find any defunct processes belonging to 3975713
[2025-10-07 08:29:11] 2025-10-07 06:28:29,346 | INFO     | did not find any defunct processes belonging to 3975713
[2025-10-07 08:29:11] 2025-10-07 06:28:29,346 | INFO     | ready for new job
[2025-10-07 08:29:11] 2025-10-07 06:28:29,346 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 08:29:11] 2025-10-07 06:28:29,348 | INFO     | ***************************************
[2025-10-07 08:29:11] 2025-10-07 06:28:29,348 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 08:29:11] 2025-10-07 06:28:29,348 | INFO     | ***************************************
[2025-10-07 08:29:11] 2025-10-07 06:28:29,348 | INFO     | 
[2025-10-07 08:29:11] 2025-10-07 06:28:29,361 | INFO     | architecture information:
[2025-10-07 08:29:11] 2025-10-07 06:28:29,361 | INFO     | executing command: cat /etc/os-release
[2025-10-07 08:29:11] 2025-10-07 06:28:29,380 | INFO     | cat /etc/os-release:
[2025-10-07 08:29:11] NAME="CentOS Linux"
[2025-10-07 08:29:11] VERSION="7 (Core)"
[2025-10-07 08:29:11] ID="centos"
[2025-10-07 08:29:11] ID_LIKE="rhel fedora"
[2025-10-07 08:29:11] VERSION_ID="7"
[2025-10-07 08:29:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 08:29:11] ANSI_COLOR="0;31"
[2025-10-07 08:29:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 08:29:11] HOME_URL="https://www.centos.org/"
[2025-10-07 08:29:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 08:29:11] 
[2025-10-07 08:29:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 08:29:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 08:29:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 08:29:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 08:29:11] 
[2025-10-07 08:29:11] 2025-10-07 06:28:29,381 | INFO     | ***************************************
[2025-10-07 08:29:11] 2025-10-07 06:28:29,884 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-07 08:29:11] 2025-10-07 06:28:29,904 | INFO     | sufficient remaining disk space (213240512512 B)
[2025-10-07 08:29:11] 2025-10-07 06:28:29,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 08:29:11] 2025-10-07 06:28:29,905 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 08:29:11] 2025-10-07 06:28:29,905 | INFO     | update_server=False
[2025-10-07 08:29:11] 2025-10-07 06:28:29,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 08:29:11] 2025-10-07 06:28:29,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 08:29:11] 2025-10-07 06:28:29,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 08:29:11] 2025-10-07 06:28:29,906 | INFO     | aborting loop
[2025-10-07 08:29:11] 2025-10-07 06:28:29,938 | INFO     | all data control threads have been joined
[2025-10-07 08:29:11] 2025-10-07 06:28:30,050 | INFO     | all payload control threads have been joined
[2025-10-07 08:29:11] 2025-10-07 06:28:30,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 08:29:11] 2025-10-07 06:28:30,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 08:29:11] 2025-10-07 06:28:30,910 | INFO     | [job] retrieve thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:30,911 | INFO     | [job] job monitor thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:30,911 | INFO     | [job] queue monitor thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:30,944 | INFO     | [data] control thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:31,054 | INFO     | [payload] control thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:31,378 | INFO     | all job control threads have been joined
[2025-10-07 08:29:11] 2025-10-07 06:28:31,498 | INFO     | [payload] failed_post thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:31,655 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:31,690 | INFO     | [job] validate thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:31,704 | INFO     | [payload] validate_post thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:31,953 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:31,987 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:32,329 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:32,384 | INFO     | [job] control thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:32,395 | INFO     | [data] copytool_in thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:32,754 | INFO     | [data] copytool_out thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:28:34,333 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 08:29:11] 2025-10-07 06:29:01,025 | INFO     | PID=3969207 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 08:29:11] 2025-10-07 06:29:01,026 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 08:29:11] 2025-10-07 06:29:01,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 08:29:11] 2025-10-07 06:29:01,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 08:29:11] 2025-10-07 06:29:05,447 | INFO     | [monitor] cgroup control has ended
[2025-10-07 08:29:11] 2025-10-07 06:29:06,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140675863947072)>', '<ExcThread(monitor, started 140675177756416)>']
[2025-10-07 08:29:11] 2025-10-07 06:29:07,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 08:29:11] 2025-10-07 06:29:07,057 | INFO     | [monitor] control thread has ended
[2025-10-07 08:29:11] 2025-10-07 06:29:11,478 | INFO     | all workflow threads have been joined
[2025-10-07 08:29:11] 2025-10-07 06:29:11,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 08:29:11] 2025-10-07 06:29:11,479 | INFO     | traces error code: 0
[2025-10-07 08:29:11] 2025-10-07 06:29:11,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 08:29:11] 2025-10-07 06:29:11,633 [wrapper] ==== pilot stdout END ====
[2025-10-07 08:29:11] 2025-10-07 06:29:11,637 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 08:29:11] 2025-10-07 06:29:11,641 [wrapper] pilotpid: 3969207
[2025-10-07 08:29:11] 2025-10-07 06:29:11,644 [wrapper] Pilot exit status: 0
[2025-10-07 08:29:11] 2025-10-07 06:29:11,746 [wrapper] pandaids: 6833159355
[2025-10-07 08:29:11] 2025-10-07 06:29:11,771 [wrapper] cleanup supervisor_pilot 3969213 3969208
[2025-10-07 08:29:11] 2025-10-07 06:29:11,775 [wrapper] Test setup, not cleaning
[2025-10-07 08:29:11] 2025-10-07 06:29:11,779 [wrapper] apfmon messages muted
[2025-10-07 08:29:11] 2025-10-07 06:29:11,782 [wrapper] ==== wrapper stdout END ====
[2025-10-07 08:29:11] 2025-10-07 06:29:11,785 [wrapper] ==== wrapper stderr END ====
[2025-10-07 08:29:11]  *** Error codes and diagnostics ***
[2025-10-07 08:29:11]     "exeErrorCode": 65,
[2025-10-07 08:29:11]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-07 08:29:11]     "pilotErrorCode": 1305,
[2025-10-07 08:29:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-07 08:29:11]  *** Listing of results directory ***
[2025-10-07 08:29:12] total 212044
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc    552446 Oct  7 02:56 pilot3.tar.gz
[2025-10-07 08:29:12] -rwx------ 1 boinc boinc     36292 Oct  7 03:02 runpilot2-wrapper.sh
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc      5112 Oct  7 03:02 queuedata.json
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc       100 Oct  7 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 08:29:12] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 08:20 run_atlas
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc       105 Oct  7 08:20 job.xml
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc      5985 Oct  7 08:20 init_data.xml
[2025-10-07 08:29:12] -rw-r--r-- 2 boinc boinc 212836063 Oct  7 08:20 EVNT.46376901._004615.pool.root.1
[2025-10-07 08:29:12] drwxrwx--x 2 boinc boinc        68 Oct  7 08:20 shared
[2025-10-07 08:29:12] -rw-r--r-- 2 boinc boinc    565597 Oct  7 08:20 input.tar.gz
[2025-10-07 08:29:12] -rw-r--r-- 2 boinc boinc     15120 Oct  7 08:20 start_atlas.sh
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc         0 Oct  7 08:20 boinc_lockfile
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc      2521 Oct  7 08:20 pandaJob.out
[2025-10-07 08:29:12] -rw------- 1 boinc boinc    974984 Oct  7 08:21 agis_schedconf.cvmfs.json
[2025-10-07 08:29:12] -rw------- 1 boinc boinc   1560401 Oct  7 08:21 agis_ddmendpoints.agis.ALL.json
[2025-10-07 08:29:12] drwx------ 4 boinc boinc       334 Oct  7 08:21 pilot3
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc       524 Oct  7 08:24 boinc_task_state.xml
[2025-10-07 08:29:12] -rw------- 1 boinc boinc     48631 Oct  7 08:26 log.46376905._124312.job.log.tgz.1
[2025-10-07 08:29:12] -rw------- 1 boinc boinc        95 Oct  7 08:28 pilot_heartbeat.json
[2025-10-07 08:29:12] -rw------- 1 boinc boinc      8064 Oct  7 08:28 heartbeat.json
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc      8192 Oct  7 08:28 boinc_mmap_file
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc        23 Oct  7 08:28 wrapper_checkpoint.txt
[2025-10-07 08:29:12] -rw------- 1 boinc boinc      4749 Oct  7 08:29 pilotlog.txt
[2025-10-07 08:29:12] -rw------- 1 boinc boinc    169781 Oct  7 08:29 log.46376905._124312.job.log.1
[2025-10-07 08:29:12] -rw------- 1 boinc boinc       188 Oct  7 08:29 output.list
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc       620 Oct  7 08:29 runtime_log
[2025-10-07 08:29:12] -rw------- 1 boinc boinc    235520 Oct  7 08:29 result.tar.gz
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc      8505 Oct  7 08:29 runtime_log.err
[2025-10-07 08:29:12] -rw------- 1 boinc boinc       640 Oct  7 08:29 h24KDmUHBQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzVVNDmusXw3n.diag
[2025-10-07 08:29:12] -rw-r--r-- 1 boinc boinc     21979 Oct  7 08:29 stderr.txt
[2025-10-07 08:29:12] No HITS result produced
[2025-10-07 08:29:12]  *** Contents of shared directory: ***
[2025-10-07 08:29:12] total 208652
[2025-10-07 08:29:12] -rw-r--r-- 2 boinc boinc 212836063 Oct  7 08:20 ATLAS.root_0
[2025-10-07 08:29:12] -rw-r--r-- 2 boinc boinc    565597 Oct  7 08:20 input.tar.gz
[2025-10-07 08:29:12] -rw-r--r-- 2 boinc boinc     15120 Oct  7 08:20 start_atlas.sh
[2025-10-07 08:29:12] -rw------- 1 boinc boinc    235520 Oct  7 08:29 result.tar.gz
08:29:13 (3965583): run_atlas exited; CPU time 136.089664
08:29:13 (3965583): called boinc_finish(0)

</stderr_txt>
]]>

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