Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:25:43 (2435): wrapper (7.7.26015): starting
01:25:43 (2435): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 01:25:43] Arguments: --nthreads 8
[2025-10-07 01:25:43] Threads: 8
[2025-10-07 01:25:43] Checking for CVMFS
[2025-10-07 01:25:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 01:25:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 01:25:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 01:25:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 01:25:44] 2.11.2.0 3213 620196 246392 151425 2 57 13443676 20275200 917 130560 1 342460539 99.992 25806925 20058 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 01:25:44] CVMFS is ok
[2025-10-07 01:25:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 01:25:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 01:25:44] Further information can be found at the LHC@home message board.
[2025-10-07 01:25:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 01:25:44] Checking for apptainer binary...
[2025-10-07 01:25:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 01:25:44] Running /usr/bin/apptainer --version
[2025-10-07 01:25:44] apptainer version 1.3.2-1.el7
[2025-10-07 01:25:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 01:25:44] c-205-38.aglt2.org
[2025-10-07 01:25:44] apptainer works
[2025-10-07 01:25:44] Set ATHENA_PROC_NUMBER=8
[2025-10-07 01:25:44] Set ATHENA_CORE_NUMBER=8
[2025-10-07 01:25:44] Starting ATLAS job with PandaID=6832974113
[2025-10-07 01:25:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 02:15:08]  *** The last 200 lines of the pilot log: ***
[2025-10-07 02:15:08]  replicas=None
[2025-10-07 02:15:08]  scope=mc23_13p6TeV
[2025-10-07 02:15:08]  status=None
[2025-10-07 02:15:08]  status_code=0
[2025-10-07 02:15:08]  storage_token=
[2025-10-07 02:15:08]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6832974113/log.46376905._119943.job.log.tgz.1
[2025-10-07 02:15:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/ea/log.46376905._119943.job.log.tgz.1
[2025-10-07 02:15:08]  workdir=None
[2025-10-07 02:15:08] ]
[2025-10-07 02:15:08] 2025-10-07 06:14:27,401 | INFO     | transferring file log.46376905._119943.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6832974113/log.46376905._119943.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-07 02:15:08] 2025-10-07 06:14:27,401 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6832974113/log.46376905._119943.job.log.tgz.1 /tmp/boinchome/slots/1/log.46376905._119943.job
[2025-10-07 02:15:08] 2025-10-07 06:14:27,419 | INFO     | adding to output.list: log.46376905._119943.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/ea/log.46376905._119943.job.log.tg
[2025-10-07 02:15:08] 2025-10-07 06:14:27,420 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 02:15:08] 2025-10-07 06:14:27,420 | INFO     | summary of transferred files:
[2025-10-07 02:15:08] 2025-10-07 06:14:27,420 | INFO     |  -- lfn=log.46376905._119943.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 02:15:08] 2025-10-07 06:14:27,420 | INFO     | stage-out finished correctly
[2025-10-07 02:15:08] 2025-10-07 06:14:28,705 | INFO     | monitor loop #222: job 0:6832974113 is in state 'finished'
[2025-10-07 02:15:08] 2025-10-07 06:14:28,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 02:15:08] 2025-10-07 06:14:29,338 | INFO     | time since job start (2917s) is within the limit (172800.0s)
[2025-10-07 02:15:08] 2025-10-07 06:14:30,710 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 02:15:08] 2025-10-07 06:14:31,209 | INFO     | monitor loop #223: job 0:6832974113 is in state 'finished'
[2025-10-07 02:15:08] 2025-10-07 06:14:31,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 02:15:08] 2025-10-07 06:14:31,342 | INFO     | time since job start (2919s) is within the limit (172800.0s)
[2025-10-07 02:15:08] 2025-10-07 06:14:33,347 | INFO     | time since job start (2921s) is within the limit (172800.0s)
[2025-10-07 02:15:08] 2025-10-07 06:14:33,609 | INFO     | job 6832974113 has state=finished
[2025-10-07 02:15:08] 2025-10-07 06:14:33,609 | INFO     | preparing for final server update for job 6832974113 in state='finished'
[2025-10-07 02:15:08] 2025-10-07 06:14:33,610 | INFO     | this job has now completed (state=finished)
[2025-10-07 02:15:08] 2025-10-07 06:14:33,610 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 02:15:08] 2025-10-07 06:14:33,610 | INFO     | log transfer has been attempted: DONE
[2025-10-07 02:15:08] 2025-10-07 06:14:33,610 | INFO     | job 6832974113 has finished - writing final server update
[2025-10-07 02:15:08] 2025-10-07 06:14:33,610 | INFO     | total number of processed events: 400 (read)
[2025-10-07 02:15:08] 2025-10-07 06:14:33,611 | INFO     | executing command: lscpu
[2025-10-07 02:15:08] 2025-10-07 06:14:33,633 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 02:15:08] 2025-10-07 06:14:33,711 | INFO     | monitor loop #224: job 0:6832974113 is in state 'finished'
[2025-10-07 02:15:08] 2025-10-07 06:14:33,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 02:15:08] 2025-10-07 06:14:35,353 | INFO     | time since job start (2923s) is within the limit (172800.0s)
[2025-10-07 02:15:08] 2025-10-07 06:14:35,992 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 02:15:08] 2025-10-07 06:14:35,995 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2922.5338125
[2025-10-07 02:15:08] 2025-10-07 06:14:35,999 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6832974113/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 02:15:08] 2025-10-07 06:14:35,999 | INFO     | extracted standard info from prmon json
[2025-10-07 02:15:08] 2025-10-07 06:14:35,999 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 02:15:08] 2025-10-07 06:14:35,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 02:15:08] 2025-10-07 06:14:35,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 02:15:08] 2025-10-07 06:14:35,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 02:15:08] 2025-10-07 06:14:36,000 | INFO     | fitting pss+swap vs Time
[2025-10-07 02:15:08] 2025-10-07 06:14:36,000 | INFO     | sum of square deviations: 21358540.0
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | sum of deviations: -972937312.0
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | mean x: 1759816297.0
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | mean y: 2679415.8048780486
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | -- intersect: 80166910567.23065
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | intersect: 80166910567.23065
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | chi2: 0.008884319800873723
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | -- intersect: 80166910567.23065
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | current memory leak: -45.55 B/s (using 41 data points, chi2=0.01)
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | could have reported an average CPU frequency of 3019 MHz (5 samples)
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | ..............................
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | . Timing measurements:
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | . get job = 0 s
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | . initial setup = 2 s
[2025-10-07 02:15:08] 2025-10-07 06:14:36,001 | INFO     | . payload setup = 3 s
[2025-10-07 02:15:08] 2025-10-07 06:14:36,002 | INFO     | . stage-in = 0 s
[2025-10-07 02:15:08] 2025-10-07 06:14:36,002 | INFO     | . payload execution = 2893 s
[2025-10-07 02:15:08] 2025-10-07 06:14:36,002 | INFO     | . stage-out = 0 s
[2025-10-07 02:15:08] 2025-10-07 06:14:36,002 | INFO     | . log creation = 0 s
[2025-10-07 02:15:08] 2025-10-07 06:14:36,002 | INFO     | ..............................
[2025-10-07 02:15:08] 2025-10-07 06:14:36,470 | INFO     | 
[2025-10-07 02:15:08] 2025-10-07 06:14:36,470 | INFO     | job summary report
[2025-10-07 02:15:08] 2025-10-07 06:14:36,471 | INFO     | --------------------------------------------------
[2025-10-07 02:15:08] 2025-10-07 06:14:36,471 | INFO     | PanDA job id: 6832974113
[2025-10-07 02:15:08] 2025-10-07 06:14:36,471 | INFO     | task id: 46376905
[2025-10-07 02:15:08] 2025-10-07 06:14:36,471 | INFO     | errors: (none)
[2025-10-07 02:15:08] 2025-10-07 06:14:36,471 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 02:15:08] 2025-10-07 06:14:36,471 | INFO     | pilot state: finished 
[2025-10-07 02:15:08] 2025-10-07 06:14:36,471 | INFO     | transexitcode: 0
[2025-10-07 02:15:08] 2025-10-07 06:14:36,471 | INFO     | exeerrorcode: 0
[2025-10-07 02:15:08] 2025-10-07 06:14:36,472 | INFO     | exeerrordiag: 
[2025-10-07 02:15:08] 2025-10-07 06:14:36,472 | INFO     | exitcode: 0
[2025-10-07 02:15:08] 2025-10-07 06:14:36,472 | INFO     | exitmsg: OK
[2025-10-07 02:15:08] 2025-10-07 06:14:36,472 | INFO     | cpuconsumptiontime: 20931 s
[2025-10-07 02:15:08] 2025-10-07 06:14:36,472 | INFO     | nevents: 400
[2025-10-07 02:15:08] 2025-10-07 06:14:36,472 | INFO     | neventsw: 0
[2025-10-07 02:15:08] 2025-10-07 06:14:36,472 | INFO     | pid: 12614
[2025-10-07 02:15:08] 2025-10-07 06:14:36,472 | INFO     | pgrp: 12614
[2025-10-07 02:15:08] 2025-10-07 06:14:36,472 | INFO     | corecount: 8
[2025-10-07 02:15:08] 2025-10-07 06:14:36,472 | INFO     | event service: False
[2025-10-07 02:15:08] 2025-10-07 06:14:36,473 | INFO     | sizes: {0: 2348649, 1: 2348848, 3: 2349110, 11: 2349138, 2900: 2374569, 2901: 2383567, 2904: 2383751, 2910: 2383977}
[2025-10-07 02:15:08] 2025-10-07 06:14:36,473 | INFO     | --------------------------------------------------
[2025-10-07 02:15:08] 2025-10-07 06:14:36,473 | INFO     | 
[2025-10-07 02:15:08] 2025-10-07 06:14:36,473 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-07 02:15:08] 2025-10-07 06:14:36,494 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,494 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,494 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,494 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,495 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,495 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 02:15:08] 2025-10-07 06:14:36,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,496 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 02:15:08] 2025-10-07 06:14:36,496 | INFO     | job 6832974113 has completed (purged errors)
[2025-10-07 02:15:08] 2025-10-07 06:14:36,496 | INFO     | overall cleanup function is called
[2025-10-07 02:15:08] 2025-10-07 06:14:37,504 | INFO     | --- collectZombieJob: --- 10, [12614]
[2025-10-07 02:15:08] 2025-10-07 06:14:37,505 | INFO     | zombie collector waiting for pid 12614
[2025-10-07 02:15:08] 2025-10-07 06:14:37,505 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 02:15:08] 2025-10-07 06:14:37,505 | INFO     | collected zombie processes
[2025-10-07 02:15:08] 2025-10-07 06:14:37,505 | INFO     | will attempt to kill all subprocesses of pid=12614
[2025-10-07 02:15:08] 2025-10-07 06:14:37,596 | INFO     | process IDs to be killed: [12614] (in reverse order)
[2025-10-07 02:15:08] 2025-10-07 06:14:37,644 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 02:15:08] 2025-10-07 06:14:37,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 02:15:08] 2025-10-07 06:14:37,647 | INFO     | did not find any defunct processes belonging to 12614
[2025-10-07 02:15:08] 2025-10-07 06:14:37,650 | INFO     | did not find any defunct processes belonging to 12614
[2025-10-07 02:15:08] 2025-10-07 06:14:37,650 | INFO     | ready for new job
[2025-10-07 02:15:08] 2025-10-07 06:14:37,650 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 02:15:08] 2025-10-07 06:14:37,652 | INFO     | ***************************************
[2025-10-07 02:15:08] 2025-10-07 06:14:37,652 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 02:15:08] 2025-10-07 06:14:37,652 | INFO     | ***************************************
[2025-10-07 02:15:08] 2025-10-07 06:14:37,652 | INFO     | 
[2025-10-07 02:15:08] 2025-10-07 06:14:37,653 | INFO     | architecture information:
[2025-10-07 02:15:08] 2025-10-07 06:14:37,654 | INFO     | executing command: cat /etc/os-release
[2025-10-07 02:15:08] 2025-10-07 06:14:37,668 | INFO     | cat /etc/os-release:
[2025-10-07 02:15:08] NAME="CentOS Linux"
[2025-10-07 02:15:08] VERSION="7 (Core)"
[2025-10-07 02:15:08] ID="centos"
[2025-10-07 02:15:08] ID_LIKE="rhel fedora"
[2025-10-07 02:15:08] VERSION_ID="7"
[2025-10-07 02:15:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 02:15:08] ANSI_COLOR="0;31"
[2025-10-07 02:15:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 02:15:08] HOME_URL="https://www.centos.org/"
[2025-10-07 02:15:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 02:15:08] 
[2025-10-07 02:15:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 02:15:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 02:15:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 02:15:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 02:15:08] 
[2025-10-07 02:15:08] 2025-10-07 06:14:37,669 | INFO     | ***************************************
[2025-10-07 02:15:08] 2025-10-07 06:14:38,172 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-07 02:15:08] 2025-10-07 06:14:38,187 | INFO     | sufficient remaining disk space (32741785600 B)
[2025-10-07 02:15:08] 2025-10-07 06:14:38,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 02:15:08] 2025-10-07 06:14:38,188 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 02:15:08] 2025-10-07 06:14:38,188 | INFO     | update_server=False
[2025-10-07 02:15:08] 2025-10-07 06:14:38,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 02:15:08] 2025-10-07 06:14:38,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 02:15:08] 2025-10-07 06:14:38,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 02:15:08] 2025-10-07 06:14:38,189 | INFO     | aborting loop
[2025-10-07 02:15:08] 2025-10-07 06:14:38,920 | INFO     | all data control threads have been joined
[2025-10-07 02:15:08] 2025-10-07 06:14:39,021 | INFO     | all payload control threads have been joined
[2025-10-07 02:15:08] 2025-10-07 06:14:39,027 | INFO     | all job control threads have been joined
[2025-10-07 02:15:08] 2025-10-07 06:14:39,193 | INFO     | [job] retrieve thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:39,195 | INFO     | [job] job monitor thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:39,382 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:39,453 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:39,673 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:39,926 | INFO     | [data] control thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:40,026 | INFO     | [payload] control thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:40,031 | INFO     | [job] control thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:40,195 | INFO     | [data] copytool_out thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:40,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:40,501 | INFO     | [data] copytool_in thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:40,506 | INFO     | [payload] validate_post thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:40,595 | INFO     | [job] validate thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:40,746 | INFO     | [payload] failed_post thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:41,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 02:15:08] 2025-10-07 06:14:41,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 02:15:08] 2025-10-07 06:14:42,074 | INFO     | [job] queue monitor thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:45,301 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 02:15:08] 2025-10-07 06:14:56,921 | INFO     | [monitor] cgroup control has ended
[2025-10-07 02:15:08] 2025-10-07 06:14:57,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240662284096)>', '<ExcThread(monitor, started 140240371033856)>']
[2025-10-07 02:15:08] 2025-10-07 06:15:02,613 | INFO     | all workflow threads have been joined
[2025-10-07 02:15:08] 2025-10-07 06:15:02,613 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 02:15:08] 2025-10-07 06:15:02,613 | INFO     | traces error code: 0
[2025-10-07 02:15:08] 2025-10-07 06:15:02,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 02:15:08] 2025-10-07 06:15:08,564 | INFO     | PID=6192 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-07 02:15:08] 2025-10-07 06:15:08,564 | INFO     | .. there are 2 such processes running
[2025-10-07 02:15:08] 2025-10-07 06:15:08,564 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 02:15:08] 2025-10-07 06:15:08,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 02:15:08] 2025-10-07 06:15:08,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 02:15:08] 2025-10-07 06:15:08,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 02:15:08] 2025-10-07 06:15:08,565 | INFO     | [monitor] control thread has ended
[2025-10-07 02:15:08] 2025-10-07 06:15:08,647 [wrapper] ==== pilot stdout END ====
[2025-10-07 02:15:08] 2025-10-07 06:15:08,651 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 02:15:08] 2025-10-07 06:15:08,655 [wrapper] pilotpid: 6192
[2025-10-07 02:15:08] 2025-10-07 06:15:08,658 [wrapper] Pilot exit status: 0
[2025-10-07 02:15:08] 2025-10-07 06:15:08,668 [wrapper] pandaids: 6832974113
[2025-10-07 02:15:08] 2025-10-07 06:15:08,702 [wrapper] cleanup supervisor_pilot 19930 6193
[2025-10-07 02:15:08] 2025-10-07 06:15:08,705 [wrapper] Test setup, not cleaning
[2025-10-07 02:15:08] 2025-10-07 06:15:08,708 [wrapper] apfmon messages muted
[2025-10-07 02:15:08] 2025-10-07 06:15:08,711 [wrapper] ==== wrapper stdout END ====
[2025-10-07 02:15:08] 2025-10-07 06:15:08,714 [wrapper] ==== wrapper stderr END ====
[2025-10-07 02:15:08]  *** Error codes and diagnostics ***
[2025-10-07 02:15:08]     "exeErrorCode": 0,
[2025-10-07 02:15:08]     "exeErrorDiag": "",
[2025-10-07 02:15:08]     "pilotErrorCode": 0,
[2025-10-07 02:15:08]     "pilotErrorDiag": "",
[2025-10-07 02:15:08]  *** Listing of results directory ***
[2025-10-07 02:15:08] total 384004
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas      5112 Oct  6 17:29 queuedata.json
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas    552446 Oct  6 17:29 pilot3.tar.gz
[2025-10-07 02:15:08] -rwx------ 1 boincer umatlas     36292 Oct  6 17:29 runpilot2-wrapper.sh
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas       100 Oct  7 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 02:15:08] -rwxr-xr-x 1 boincer umatlas      7986 Oct  7 01:25 run_atlas
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas       105 Oct  7 01:25 job.xml
[2025-10-07 02:15:08] -rw-r--r-- 2 boincer umatlas 211538622 Oct  7 01:25 EVNT.46376901._004452.pool.root.1
[2025-10-07 02:15:08] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 01:25 start_atlas.sh
[2025-10-07 02:15:08] drwxrwx--x 2 boincer umatlas      4096 Oct  7 01:25 shared
[2025-10-07 02:15:08] -rw-r--r-- 2 boincer umatlas    565598 Oct  7 01:25 input.tar.gz
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas         0 Oct  7 01:25 boinc_lockfile
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas      2521 Oct  7 01:25 pandaJob.out
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas    974984 Oct  7 01:25 agis_schedconf.cvmfs.json
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas   1560401 Oct  7 01:25 agis_ddmendpoints.agis.ALL.json
[2025-10-07 02:15:08] drwx------ 4 boincer umatlas      4096 Oct  7 01:25 pilot3
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas      6134 Oct  7 02:12 init_data.xml
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas 176289302 Oct  7 02:14 HITS.46376905._119943.pool.root.1
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas       530 Oct  7 02:14 boinc_task_state.xml
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas        95 Oct  7 02:14 pilot_heartbeat.json
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas      1047 Oct  7 02:14 memory_monitor_summary.json
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas    300310 Oct  7 02:14 log.46376905._119943.job.log.tgz.1
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas      7840 Oct  7 02:14 heartbeat.json
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas      8192 Oct  7 02:14 boinc_mmap_file
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas        27 Oct  7 02:14 wrapper_checkpoint.txt
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas       819 Oct  7 02:15 pilotlog.txt
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas    453417 Oct  7 02:15 log.46376905._119943.job.log.1
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas       357 Oct  7 02:15 output.list
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas       620 Oct  7 02:15 runtime_log
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas    768000 Oct  7 02:15 result.tar.gz
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas      8703 Oct  7 02:15 runtime_log.err
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas       657 Oct  7 02:15 nThLDmww7P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJpUNDmAeIfom.diag
[2025-10-07 02:15:08] -rw-r--r-- 1 boincer umatlas     21816 Oct  7 02:15 stderr.txt
[2025-10-07 02:15:08] HITS file was successfully produced:
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas 176289302 Oct  7 02:14 shared/HITS.pool.root.1
[2025-10-07 02:15:08]  *** Contents of shared directory: ***
[2025-10-07 02:15:08] total 380076
[2025-10-07 02:15:08] -rw-r--r-- 2 boincer umatlas 211538622 Oct  7 01:25 ATLAS.root_0
[2025-10-07 02:15:08] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 01:25 start_atlas.sh
[2025-10-07 02:15:08] -rw-r--r-- 2 boincer umatlas    565598 Oct  7 01:25 input.tar.gz
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas 176289302 Oct  7 02:14 HITS.pool.root.1
[2025-10-07 02:15:08] -rw------- 1 boincer umatlas    768000 Oct  7 02:15 result.tar.gz
02:15:10 (2435): run_atlas exited; CPU time 20892.753017
02:15:10 (2435): called boinc_finish(0)

</stderr_txt>
]]>

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