Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:58:23 (3897617): wrapper (7.7.26015): starting
21:58:23 (3897617): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 21:58:23] Arguments: --nthreads 12
[2025-10-06 21:58:23] Threads: 12
[2025-10-06 21:58:23] Checking for CVMFS
[2025-10-06 21:58:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 21:58:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 21:58:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 21:58:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 21:58:23] 2.11.5.0 2798 23845 352596 151424 3 570 26814900 45568001 22159 130560 0 233864415 99.874 91596192 22847 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 21:58:23] CVMFS is ok
[2025-10-06 21:58:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 21:58:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 21:58:23] Further information can be found at the LHC@home message board.
[2025-10-06 21:58:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 21:58:23] Checking for apptainer binary...
[2025-10-06 21:58:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 21:58:23] Running /usr/bin/apptainer --version
[2025-10-06 21:58:24] apptainer version 1.4.1-1.el9
[2025-10-06 21:58:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 21:58:24] wns0065.triumf.lcg
[2025-10-06 21:58:24] apptainer works
[2025-10-06 21:58:24] Set ATHENA_PROC_NUMBER=12
[2025-10-06 21:58:24] Set ATHENA_CORE_NUMBER=12
[2025-10-06 21:58:24] Starting ATLAS job with PandaID=6833163837
[2025-10-06 21:58:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 22:01:42]  *** The last 200 lines of the pilot log: ***
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | WARNING  | found no stored workdir sizes
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | WARNING  | wrong length of table data, x=[1759813135.0], y=[2216.0] (must be same and length>=4)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | INFO     | could have reported an average CPU frequency of 2762 MHz (4 samples)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | ..............................
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . Timing measurements:
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . get job = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . initial setup = 2 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . payload setup = 4 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . stage-in = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . payload execution = 14 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . stage-out = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . log creation = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | ..............................
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833163837/pilotlog.txt
[2025-10-06 22:01:43] 2025-10-07 05:01:10,559 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 22:01:43] - Log from pilotlog.txt -
[2025-10-06 22:01:43] 2025-10-07 05:01:10,546 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 22:01:43] 2025-10-07 05:01:10,546 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | WARNING  | found no stored workdir sizes
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | WARNING  | wrong length of table data, x=[1759813135.0], y=[2216.0] (must be same and length>=4)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | INFO     | could have reported an average CPU frequency of 2762 MHz (4 samples)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | ..............................
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . Timing measurements:
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . get job = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . initial setup = 2 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . payload setup = 4 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . stage-in = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . payload execution = 14 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . stage-out = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . log creation = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | ..............................
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833163837/pilotlog.txt
[2025-10-06 22:01:43] 2025-10-07 05:01:10,559 | WARNING  | 
[2025-10-06 22:01:43] [begin log extracts]
[2025-10-06 22:01:43] - Log from pilotlog.txt -
[2025-10-06 22:01:43] 2025-10-07 05:01:10,546 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 22:01:43] 2025-10-07 05:01:10,546 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | WARNING  | found no stored workdir sizes
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | WARNING  | wrong length of table data, x=[1759813135.0], y=[2216.0] (must be same and length>=4)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,547 | INFO     | could have reported an average CPU frequency of 2762 MHz (4 samples)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | ..............................
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . Timing measurements:
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . get job = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . initial setup = 2 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . payload setup = 4 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . stage-in = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . payload execution = 14 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . stage-out = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | . log creation = 0 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | ..............................
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 22:01:43] 2025-10-07 05:01:10,548 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833163837/pilotlog.txt
[2025-10-06 22:01:43] [end log extracts]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,559 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,560 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 22:01:43] 2025-10-07 05:01:10,620 | INFO     | 
[2025-10-06 22:01:43] 2025-10-07 05:01:10,620 | INFO     | job summary report
[2025-10-06 22:01:43] 2025-10-07 05:01:10,620 | INFO     | --------------------------------------------------
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | PanDA job id: 6833163837
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | task id: 46376905
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 21:59:01,975 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | pilot state: failed 
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | transexitcode: 65
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | exeerrorcode: 65
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | exitcode: 65
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | cpuconsumptiontime: 16 s
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | nevents: 0
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | neventsw: 0
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | pid: 3907936
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | pgrp: 3907936
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | corecount: 12
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | event service: False
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | sizes: {0: 2348766, 3: 2349028, 10: 2349056, 22: 2372131, 23: 2376451, 144: 2376589}
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | --------------------------------------------------
[2025-10-06 22:01:43] 2025-10-07 05:01:10,621 | INFO     | 
[2025-10-06 22:01:43] 2025-10-07 05:01:10,622 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 22:01:43] 2025-10-07 05:01:10,637 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,638 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,639 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 22:01:43] 2025-10-07 05:01:10,639 | INFO     | job 6833163837 has completed (purged errors)
[2025-10-06 22:01:43] 2025-10-07 05:01:10,639 | INFO     | overall cleanup function is called
[2025-10-06 22:01:43] 2025-10-07 05:01:11,646 | INFO     | --- collectZombieJob: --- 10, [3907936]
[2025-10-06 22:01:43] 2025-10-07 05:01:11,646 | INFO     | zombie collector waiting for pid 3907936
[2025-10-06 22:01:43] 2025-10-07 05:01:11,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 22:01:43] 2025-10-07 05:01:11,646 | INFO     | collected zombie processes
[2025-10-06 22:01:43] 2025-10-07 05:01:11,646 | INFO     | will attempt to kill all subprocesses of pid=3907936
[2025-10-06 22:01:43] 2025-10-07 05:01:11,865 | INFO     | process IDs to be killed: [3907936] (in reverse order)
[2025-10-06 22:01:43] 2025-10-07 05:01:11,945 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 22:01:43] 2025-10-07 05:01:11,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 22:01:43] 2025-10-07 05:01:11,955 | INFO     | did not find any defunct processes belonging to 3907936
[2025-10-06 22:01:43] 2025-10-07 05:01:11,965 | INFO     | did not find any defunct processes belonging to 3907936
[2025-10-06 22:01:43] 2025-10-07 05:01:11,965 | INFO     | ready for new job
[2025-10-06 22:01:43] 2025-10-07 05:01:11,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 22:01:43] 2025-10-07 05:01:11,967 | INFO     | ***************************************
[2025-10-06 22:01:43] 2025-10-07 05:01:11,967 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 22:01:43] 2025-10-07 05:01:11,968 | INFO     | ***************************************
[2025-10-06 22:01:43] 2025-10-07 05:01:11,968 | INFO     | 
[2025-10-06 22:01:43] 2025-10-07 05:01:11,969 | INFO     | architecture information:
[2025-10-06 22:01:43] 2025-10-07 05:01:11,970 | INFO     | executing command: cat /etc/os-release
[2025-10-06 22:01:43] 2025-10-07 05:01:11,982 | INFO     | cat /etc/os-release:
[2025-10-06 22:01:43] NAME="CentOS Linux"
[2025-10-06 22:01:43] VERSION="7 (Core)"
[2025-10-06 22:01:43] ID="centos"
[2025-10-06 22:01:43] ID_LIKE="rhel fedora"
[2025-10-06 22:01:43] VERSION_ID="7"
[2025-10-06 22:01:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 22:01:43] ANSI_COLOR="0;31"
[2025-10-06 22:01:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 22:01:43] HOME_URL="https://www.centos.org/"
[2025-10-06 22:01:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 22:01:43] 
[2025-10-06 22:01:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 22:01:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 22:01:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 22:01:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 22:01:43] 
[2025-10-06 22:01:43] 2025-10-07 05:01:11,982 | INFO     | ***************************************
[2025-10-06 22:01:43] 2025-10-07 05:01:12,485 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 22:01:43] 2025-10-07 05:01:12,498 | INFO     | sufficient remaining disk space (2166797369344 B)
[2025-10-06 22:01:43] 2025-10-07 05:01:12,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 22:01:43] 2025-10-07 05:01:12,499 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 22:01:43] 2025-10-07 05:01:12,499 | INFO     | update_server=False
[2025-10-06 22:01:43] 2025-10-07 05:01:12,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 22:01:43] 2025-10-07 05:01:12,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 22:01:43] 2025-10-07 05:01:12,695 | INFO     | all job control threads have been joined
[2025-10-06 22:01:43] 2025-10-07 05:01:12,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 22:01:43] 2025-10-07 05:01:12,836 | INFO     | aborting loop
[2025-10-06 22:01:43] 2025-10-07 05:01:12,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 22:01:43] 2025-10-07 05:01:13,367 | INFO     | all payload control threads have been joined
[2025-10-06 22:01:43] 2025-10-07 05:01:13,469 | INFO     | all data control threads have been joined
[2025-10-06 22:01:43] 2025-10-07 05:01:13,504 | INFO     | [job] queue monitor thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:13,504 | INFO     | [job] retrieve thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:13,646 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:13,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 22:01:43] 2025-10-07 05:01:13,700 | INFO     | [job] control thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:13,754 | INFO     | [data] copytool_in thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:13,841 | INFO     | [job] job monitor thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:13,944 | INFO     | [payload] failed_post thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:14,372 | INFO     | [payload] control thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:14,450 | INFO     | [job] validate thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:14,474 | INFO     | [data] control thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:14,609 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:14,689 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:14,777 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:14,861 | INFO     | [data] copytool_out thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:14,926 | INFO     | [payload] validate_post thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:17,671 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 22:01:43] 2025-10-07 05:01:32,240 | INFO     | [monitor] cgroup control has ended
[2025-10-06 22:01:43] 2025-10-07 05:01:34,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656921069376)>', '<ExcThread(monitor, started 139656029009664)>']
[2025-10-06 22:01:43] 2025-10-07 05:01:39,053 | INFO     | all workflow threads have been joined
[2025-10-06 22:01:43] 2025-10-07 05:01:39,053 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 22:01:43] 2025-10-07 05:01:39,053 | INFO     | traces error code: 0
[2025-10-06 22:01:43] 2025-10-07 05:01:39,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 22:01:43] 2025-10-07 05:01:42,774 | INFO     | PID=3901361 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 22:01:43] 2025-10-07 05:01:42,775 | INFO     | .. there are 42 such processes running
[2025-10-06 22:01:43] 2025-10-07 05:01:42,776 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 22:01:43] 2025-10-07 05:01:42,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 22:01:43] 2025-10-07 05:01:42,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 22:01:43] 2025-10-07 05:01:42,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 22:01:43] 2025-10-07 05:01:42,776 | CRITICAL | thread 'MainThread' is not alive
[2025-10-06 22:01:43] 2025-10-07 05:01:42,776 | INFO     | [monitor] control thread has ended
[2025-10-06 22:01:43] 2025-10-07 05:01:42,884 [wrapper] ==== pilot stdout END ====
[2025-10-06 22:01:43] 2025-10-07 05:01:42,887 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 22:01:43] 2025-10-07 05:01:42,889 [wrapper] pilotpid: 3901361
[2025-10-06 22:01:43] 2025-10-07 05:01:42,891 [wrapper] Pilot exit status: 0
[2025-10-06 22:01:43] 2025-10-07 05:01:42,899 [wrapper] pandaids: 6833163837
[2025-10-06 22:01:43] 2025-10-07 05:01:42,950 [wrapper] cleanup supervisor_pilot 3901367 3901362
[2025-10-06 22:01:43] 2025-10-07 05:01:42,952 [wrapper] Test setup, not cleaning
[2025-10-06 22:01:43] 2025-10-07 05:01:42,954 [wrapper] apfmon messages muted
[2025-10-06 22:01:43] 2025-10-07 05:01:42,956 [wrapper] ==== wrapper stdout END ====
[2025-10-06 22:01:43] 2025-10-07 05:01:42,958 [wrapper] ==== wrapper stderr END ====
[2025-10-06 22:01:43]  *** Error codes and diagnostics ***
[2025-10-06 22:01:43]     "exeErrorCode": 65,
[2025-10-06 22:01:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 22:01:43]     "pilotErrorCode": 1305,
[2025-10-06 22:01:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 22:01:43]  *** Listing of results directory ***
[2025-10-06 22:01:43] total 213388
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc    552446 Oct  6 19:44 pilot3.tar.gz
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc      5112 Oct  6 19:56 queuedata.json
[2025-10-06 22:01:43] -rwx------. 1 boinc boinc     36292 Oct  6 19:57 runpilot2-wrapper.sh
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc       100 Oct  6 21:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 22:01:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 21:58 run_atlas
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc       105 Oct  6 21:58 job.xml
[2025-10-06 22:01:43] -rw-r--r--. 2 boinc boinc    565604 Oct  6 21:58 input.tar.gz
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc      6594 Oct  6 21:58 init_data.xml
[2025-10-06 22:01:43] -rw-r--r--. 2 boinc boinc 214420113 Oct  6 21:58 EVNT.46376901._004694.pool.root.1
[2025-10-06 22:01:43] -rw-r--r--. 2 boinc boinc     15120 Oct  6 21:58 start_atlas.sh
[2025-10-06 22:01:43] drwxrwx--x. 2 boinc boinc      4096 Oct  6 21:58 shared
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc         0 Oct  6 21:58 boinc_lockfile
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc      2520 Oct  6 21:58 pandaJob.out
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc    974984 Oct  6 21:58 agis_schedconf.cvmfs.json
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc   1560401 Oct  6 21:58 agis_ddmendpoints.agis.ALL.json
[2025-10-06 22:01:43] drwx------. 4 boinc boinc      4096 Oct  6 21:58 pilot3
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc       523 Oct  6 21:59 boinc_task_state.xml
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc       952 Oct  6 21:59 memory_monitor_summary.json
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc     20741 Oct  6 21:59 log.46376905._126291.job.log.tgz.1
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc      8387 Oct  6 22:01 heartbeat.json
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc      8192 Oct  6 22:01 boinc_mmap_file
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc        22 Oct  6 22:01 wrapper_checkpoint.txt
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc       893 Oct  6 22:01 pilotlog.txt
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc        95 Oct  6 22:01 pilot_heartbeat.json
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc     82146 Oct  6 22:01 log.46376905._126291.job.log.1
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc       188 Oct  6 22:01 output.list
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc       620 Oct  6 22:01 runtime_log
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc    122880 Oct  6 22:01 result.tar.gz
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc       645 Oct  6 22:01 x8KMDmj4CQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGmVNDmq6ldXo.diag
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc      8528 Oct  6 22:01 runtime_log.err
[2025-10-06 22:01:43] -rw-r--r--. 1 boinc boinc     21611 Oct  6 22:01 stderr.txt
[2025-10-06 22:01:43] No HITS result produced
[2025-10-06 22:01:43]  *** Contents of shared directory: ***
[2025-10-06 22:01:43] total 210088
[2025-10-06 22:01:43] -rw-r--r--. 2 boinc boinc    565604 Oct  6 21:58 input.tar.gz
[2025-10-06 22:01:43] -rw-r--r--. 2 boinc boinc 214420113 Oct  6 21:58 ATLAS.root_0
[2025-10-06 22:01:43] -rw-r--r--. 2 boinc boinc     15120 Oct  6 21:58 start_atlas.sh
[2025-10-06 22:01:43] -rw-------. 1 boinc boinc    122880 Oct  6 22:01 result.tar.gz
22:01:44 (3897617): run_atlas exited; CPU time 21.167711
22:01:44 (3897617): called boinc_finish(0)

</stderr_txt>
]]>

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