Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:18:21 (11975): wrapper (7.7.26015): starting
14:18:21 (11975): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 14:18:21] Arguments: --nthreads 8
[2025-10-07 14:18:21] Threads: 8
[2025-10-07 14:18:21] Checking for CVMFS
[2025-10-07 14:18:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 14:18:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 14:18:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 14:18:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 14:18:23] 2.11.2.0 20802 13528 79104 151434 1 211 19153714 25165824 4632 130560 0 4299542 99.838 1921860 1165 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 14:18:23] CVMFS is ok
[2025-10-07 14:18:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 14:18:23] Checking for apptainer binary...
[2025-10-07 14:18:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 14:18:23] Running /usr/bin/apptainer --version
[2025-10-07 14:18:23] apptainer version 1.3.2-1.el7
[2025-10-07 14:18:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 14:18:43] cg-vwn369.simple-grid.lan
[2025-10-07 14:18:43] apptainer works
[2025-10-07 14:18:43] Set ATHENA_PROC_NUMBER=8
[2025-10-07 14:18:43] Set ATHENA_CORE_NUMBER=8
[2025-10-07 14:18:43] Starting ATLAS job with PandaID=6833162543
[2025-10-07 14:18:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 18:09:04]  *** The last 200 lines of the pilot log: ***
[2025-10-07 18:09:04] 2025-10-07 16:08:27,655 | INFO     | sum of deviations: 40834855033.000015
[2025-10-07 18:09:04] 2025-10-07 16:08:27,655 | INFO     | mean x: 1759846671.5
[2025-10-07 18:09:04] 2025-10-07 16:08:27,655 | INFO     | mean y: 2486449.112149533
[2025-10-07 18:09:04] 2025-10-07 16:08:27,655 | INFO     | -- intersect: -23645577360.10676
[2025-10-07 18:09:04] 2025-10-07 16:08:27,656 | INFO     | intersect: -23645577360.10676
[2025-10-07 18:09:04] 2025-10-07 16:08:27,656 | INFO     | chi2: 8.516572617034077
[2025-10-07 18:09:04] 2025-10-07 16:08:27,657 | INFO     | sum of square deviations: 2830787960.0
[2025-10-07 18:09:04] 2025-10-07 16:08:27,658 | INFO     | sum of deviations: 55570428978.999985
[2025-10-07 18:09:04] 2025-10-07 16:08:27,659 | INFO     | mean x: 1759846519.0
[2025-10-07 18:09:04] 2025-10-07 16:08:27,659 | INFO     | mean y: 2497050.2822966506
[2025-10-07 18:09:04] 2025-10-07 16:08:27,659 | INFO     | -- intersect: -34544571603.36206
[2025-10-07 18:09:04] 2025-10-07 16:08:27,659 | INFO     | intersect: -34544571603.36206
[2025-10-07 18:09:04] 2025-10-07 16:08:27,659 | INFO     | chi2: 7.800209239313863
[2025-10-07 18:09:04] 2025-10-07 16:08:27,659 | INFO     | current chi2=7.800209239313863 (change=8.41140456299767 %)
[2025-10-07 18:09:04] 2025-10-07 16:08:27,660 | INFO     | right removable region: 208
[2025-10-07 18:09:04] 2025-10-07 16:08:27,660 | INFO     | sum of square deviations: 2830787960.0
[2025-10-07 18:09:04] 2025-10-07 16:08:27,667 | INFO     | sum of deviations: -35484068318.0
[2025-10-07 18:09:04] 2025-10-07 16:08:27,667 | INFO     | mean x: 1759846824.0
[2025-10-07 18:09:04] 2025-10-07 16:08:27,667 | INFO     | mean y: 2542348.813397129
[2025-10-07 18:09:04] 2025-10-07 16:08:27,667 | INFO     | -- intersect: 22062310093.491566
[2025-10-07 18:09:04] 2025-10-07 16:08:27,667 | INFO     | intersect: 22062310093.491566
[2025-10-07 18:09:04] 2025-10-07 16:08:27,668 | INFO     | chi2: 3.329397014392263
[2025-10-07 18:09:04] 2025-10-07 16:08:27,668 | INFO     | current chi2=3.329397014392263 (change=60.906844054460294 %)
[2025-10-07 18:09:04] 2025-10-07 16:08:27,668 | INFO     | sum of square deviations: 2632440055.0
[2025-10-07 18:09:04] 2025-10-07 16:08:27,670 | INFO     | sum of deviations: -83941935635.5
[2025-10-07 18:09:04] 2025-10-07 16:08:27,670 | INFO     | mean x: 1759846976.5
[2025-10-07 18:09:04] 2025-10-07 16:08:27,670 | INFO     | mean y: 2579442.720588235
[2025-10-07 18:09:04] 2025-10-07 16:08:27,671 | INFO     | -- intersect: 56119702166.60054
[2025-10-07 18:09:04] 2025-10-07 16:08:27,671 | INFO     | intersect: 56119702166.60054
[2025-10-07 18:09:04] 2025-10-07 16:08:27,671 | INFO     | chi2: 1.1081921125145078
[2025-10-07 18:09:04] 2025-10-07 16:08:27,671 | INFO     | current chi2=1.1081921125145078 (change=66.71493042962335 %)
[2025-10-07 18:09:04] 2025-10-07 16:08:27,672 | INFO     | sum of square deviations: 2443580700.0
[2025-10-07 18:09:04] 2025-10-07 16:08:27,673 | INFO     | sum of deviations: -89846773425.00008
[2025-10-07 18:09:04] 2025-10-07 16:08:27,673 | INFO     | mean x: 1759847129.0
[2025-10-07 18:09:04] 2025-10-07 16:08:27,674 | INFO     | mean y: 2584154.3165829144
[2025-10-07 18:09:04] 2025-10-07 16:08:27,674 | INFO     | -- intersect: 64709506361.51026
[2025-10-07 18:09:04] 2025-10-07 16:08:27,674 | INFO     | intersect: 64709506361.51026
[2025-10-07 18:09:04] 2025-10-07 16:08:27,674 | INFO     | chi2: 0.996059900967838
[2025-10-07 18:09:04] 2025-10-07 16:08:27,674 | INFO     | current chi2=0.996059900967838 (change=10.118481288613374 %)
[2025-10-07 18:09:04] 2025-10-07 16:08:27,681 | INFO     | left removable region: 30
[2025-10-07 18:09:04] 2025-10-07 16:08:27,681 | INFO     | sum of square deviations: 1748737904.5
[2025-10-07 18:09:04] 2025-10-07 16:08:27,682 | INFO     | sum of deviations: -60553796773.0
[2025-10-07 18:09:04] 2025-10-07 16:08:27,683 | INFO     | mean x: 1759847403.5
[2025-10-07 18:09:04] 2025-10-07 16:08:27,683 | INFO     | mean y: 2587144.617977528
[2025-10-07 18:09:04] 2025-10-07 16:08:27,683 | INFO     | -- intersect: 60941074123.60297
[2025-10-07 18:09:04] 2025-10-07 16:08:27,683 | INFO     | intersect: 60941074123.60297
[2025-10-07 18:09:04] 2025-10-07 16:08:27,683 | INFO     | chi2: 0.16338318787499242
[2025-10-07 18:09:04] 2025-10-07 16:08:27,683 | INFO     | -- intersect: 60941074123.60297
[2025-10-07 18:09:04] 2025-10-07 16:08:27,684 | INFO     | current memory leak: -34.63 B/s (using 178 data points, chi2=0.16)
[2025-10-07 18:09:04] 2025-10-07 16:08:27,684 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-07 18:09:04] 2025-10-07 16:08:27,684 | INFO     | ..............................
[2025-10-07 18:09:04] 2025-10-07 16:08:27,685 | INFO     | . Timing measurements:
[2025-10-07 18:09:04] 2025-10-07 16:08:27,685 | INFO     | . get job = 0 s
[2025-10-07 18:09:04] 2025-10-07 16:08:27,685 | INFO     | . initial setup = 5 s
[2025-10-07 18:09:04] 2025-10-07 16:08:27,685 | INFO     | . payload setup = 118 s
[2025-10-07 18:09:04] 2025-10-07 16:08:27,685 | INFO     | . stage-in = 0 s
[2025-10-07 18:09:04] 2025-10-07 16:08:27,685 | INFO     | . payload execution = 13192 s
[2025-10-07 18:09:04] 2025-10-07 16:08:27,685 | INFO     | . stage-out = 3 s
[2025-10-07 18:09:04] 2025-10-07 16:08:27,685 | INFO     | . log creation = 0 s
[2025-10-07 18:09:04] 2025-10-07 16:08:27,685 | INFO     | ..............................
[2025-10-07 18:09:04] 2025-10-07 16:08:28,054 | INFO     | 
[2025-10-07 18:09:04] 2025-10-07 16:08:28,054 | INFO     | job summary report
[2025-10-07 18:09:04] 2025-10-07 16:08:28,054 | INFO     | --------------------------------------------------
[2025-10-07 18:09:04] 2025-10-07 16:08:28,054 | INFO     | PanDA job id: 6833162543
[2025-10-07 18:09:04] 2025-10-07 16:08:28,054 | INFO     | task id: 46376905
[2025-10-07 18:09:04] 2025-10-07 16:08:28,054 | INFO     | errors: (none)
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | pilot state: finished 
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | transexitcode: 0
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | exeerrorcode: 0
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | exeerrordiag: 
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | exitcode: 0
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | exitmsg: OK
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | cpuconsumptiontime: 47643 s
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | nevents: 400
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | neventsw: 0
[2025-10-07 18:09:04] 2025-10-07 16:08:28,055 | INFO     | pid: 22317
[2025-10-07 18:09:04] 2025-10-07 16:08:28,056 | INFO     | pgrp: 22317
[2025-10-07 18:09:04] 2025-10-07 16:08:28,056 | INFO     | corecount: 8
[2025-10-07 18:09:04] 2025-10-07 16:08:28,056 | INFO     | event service: False
[2025-10-07 18:09:04] 2025-10-07 16:08:28,056 | INFO     | sizes: {0: 2348649, 1: 2348848, 12: 2348848, 23: 2348876, 34: 2348904, 44: 2348932, 55: 2349088, 66: 2349116, 77: 2349462, 87: 2349462, 13315: 2379020, 13316: 2379
[2025-10-07 18:09:04] 2025-10-07 16:08:28,056 | INFO     | --------------------------------------------------
[2025-10-07 18:09:04] 2025-10-07 16:08:28,056 | INFO     | 
[2025-10-07 18:09:04] 2025-10-07 16:08:28,056 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-07 18:09:04] 2025-10-07 16:08:28,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,561 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,562 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 18:09:04] 2025-10-07 16:08:28,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 18:09:04] 2025-10-07 16:08:28,562 | INFO     | job 6833162543 has completed (purged errors)
[2025-10-07 18:09:04] 2025-10-07 16:08:28,563 | INFO     | overall cleanup function is called
[2025-10-07 18:09:04] 2025-10-07 16:08:29,572 | INFO     | --- collectZombieJob: --- 10, [22317]
[2025-10-07 18:09:04] 2025-10-07 16:08:29,572 | INFO     | zombie collector waiting for pid 22317
[2025-10-07 18:09:04] 2025-10-07 16:08:29,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 18:09:04] 2025-10-07 16:08:29,572 | INFO     | collected zombie processes
[2025-10-07 18:09:04] 2025-10-07 16:08:29,572 | INFO     | will attempt to kill all subprocesses of pid=22317
[2025-10-07 18:09:04] 2025-10-07 16:08:29,716 | INFO     | process IDs to be killed: [22317] (in reverse order)
[2025-10-07 18:09:04] 2025-10-07 16:08:30,628 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 18:09:04] 2025-10-07 16:08:30,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 18:09:04] 2025-10-07 16:08:30,633 | INFO     | did not find any defunct processes belonging to 22317
[2025-10-07 18:09:04] 2025-10-07 16:08:30,636 | INFO     | did not find any defunct processes belonging to 22317
[2025-10-07 18:09:04] 2025-10-07 16:08:30,636 | INFO     | ready for new job
[2025-10-07 18:09:04] 2025-10-07 16:08:30,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 18:09:04] 2025-10-07 16:08:30,639 | INFO     | ***************************************
[2025-10-07 18:09:04] 2025-10-07 16:08:30,639 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 18:09:04] 2025-10-07 16:08:30,639 | INFO     | ***************************************
[2025-10-07 18:09:04] 2025-10-07 16:08:30,639 | INFO     | 
[2025-10-07 18:09:04] 2025-10-07 16:08:30,640 | INFO     | pilot is running in a VM
[2025-10-07 18:09:04] 2025-10-07 16:08:30,640 | INFO     | architecture information:
[2025-10-07 18:09:04] 2025-10-07 16:08:30,654 | INFO     | executing command: cat /etc/os-release
[2025-10-07 18:09:04] 2025-10-07 16:08:30,762 | INFO     | cat /etc/os-release:
[2025-10-07 18:09:04] NAME="CentOS Linux"
[2025-10-07 18:09:04] VERSION="7 (Core)"
[2025-10-07 18:09:04] ID="centos"
[2025-10-07 18:09:04] ID_LIKE="rhel fedora"
[2025-10-07 18:09:04] VERSION_ID="7"
[2025-10-07 18:09:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 18:09:04] ANSI_COLOR="0;31"
[2025-10-07 18:09:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 18:09:04] HOME_URL="https://www.centos.org/"
[2025-10-07 18:09:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 18:09:04] 
[2025-10-07 18:09:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 18:09:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 18:09:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 18:09:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 18:09:04] 
[2025-10-07 18:09:04] 2025-10-07 16:08:30,762 | INFO     | ***************************************
[2025-10-07 18:09:04] 2025-10-07 16:08:31,266 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-07 18:09:04] 2025-10-07 16:08:31,418 | INFO     | sufficient remaining disk space (496090742784 B)
[2025-10-07 18:09:04] 2025-10-07 16:08:31,419 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 18:09:04] 2025-10-07 16:08:31,419 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 18:09:04] 2025-10-07 16:08:31,419 | INFO     | update_server=False
[2025-10-07 18:09:04] 2025-10-07 16:08:31,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 18:09:04] 2025-10-07 16:08:31,582 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 18:09:04] 2025-10-07 16:08:31,582 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 18:09:04] 2025-10-07 16:08:31,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 18:09:04] 2025-10-07 16:08:31,582 | INFO     | will abort loop
[2025-10-07 18:09:04] 2025-10-07 16:08:31,875 | INFO     | all payload control threads have been joined
[2025-10-07 18:09:04] 2025-10-07 16:08:32,294 | INFO     | all job control threads have been joined
[2025-10-07 18:09:04] 2025-10-07 16:08:32,425 | INFO     | [job] retrieve thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:32,463 | INFO     | all data control threads have been joined
[2025-10-07 18:09:04] 2025-10-07 16:08:32,588 | INFO     | [job] job monitor thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:32,608 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 18:09:04] 2025-10-07 16:08:32,714 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:32,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 18:09:04] 2025-10-07 16:08:32,881 | INFO     | [payload] control thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:32,939 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 18:09:04] 2025-10-07 16:08:33,027 | INFO     | [payload] validate_post thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:33,255 | INFO     | [data] copytool_in thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:33,300 | INFO     | [job] control thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:33,344 | INFO     | [monitor] cgroup control has ended
[2025-10-07 18:09:04] 2025-10-07 16:08:33,469 | INFO     | [data] control thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:33,645 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:33,805 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:33,847 | INFO     | [job] queue monitor thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:33,913 | INFO     | [job] validate thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:33,938 | INFO     | [payload] failed_post thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:34,615 | INFO     | [data] copytool_out thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:36,948 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:41,715 | INFO     | job.realtimelogging is not enabled
[2025-10-07 18:09:04] 2025-10-07 16:08:42,720 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 18:09:04] 2025-10-07 16:08:43,017 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929753388864)>', '<ExcThread(monitor, started 139929447274240)>']
[2025-10-07 18:09:04] 2025-10-07 16:08:48,042 | INFO     | all workflow threads have been joined
[2025-10-07 18:09:04] 2025-10-07 16:08:48,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 18:09:04] 2025-10-07 16:08:48,042 | INFO     | traces error code: 0
[2025-10-07 18:09:04] 2025-10-07 16:08:48,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 18:09:04] 2025-10-07 16:09:00,016 | INFO     | PID=15758 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 18:09:04] 2025-10-07 16:09:00,016 | INFO     | .. there are 9 such processes running
[2025-10-07 18:09:04] 2025-10-07 16:09:00,018 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 18:09:04] 2025-10-07 16:09:00,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 18:09:04] 2025-10-07 16:09:00,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 18:09:04] 2025-10-07 16:09:00,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 18:09:04] 2025-10-07 16:09:00,018 | CRITICAL | thread 'MainThread' is not alive
[2025-10-07 18:09:04] 2025-10-07 16:09:00,018 | INFO     | [monitor] control thread has ended
[2025-10-07 18:09:04] 2025-10-07 16:09:00,357 [wrapper] ==== pilot stdout END ====
[2025-10-07 18:09:04] 2025-10-07 16:09:00,411 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 18:09:04] 2025-10-07 16:09:00,455 [wrapper] pilotpid: 15758
[2025-10-07 18:09:04] 2025-10-07 16:09:00,501 [wrapper] Pilot exit status: 0
[2025-10-07 18:09:04] 2025-10-07 16:09:00,812 [wrapper] pandaids: 6833162543
[2025-10-07 18:09:04] 2025-10-07 16:09:01,835 [wrapper] cleanup supervisor_pilot 13933 15759
[2025-10-07 18:09:04] 2025-10-07 16:09:01,932 [wrapper] Test setup, not cleaning
[2025-10-07 18:09:04] 2025-10-07 16:09:02,012 [wrapper] apfmon messages muted
[2025-10-07 18:09:04] 2025-10-07 16:09:02,116 [wrapper] ==== wrapper stdout END ====
[2025-10-07 18:09:04] 2025-10-07 16:09:02,223 [wrapper] ==== wrapper stderr END ====
[2025-10-07 18:09:04]  *** Error codes and diagnostics ***
[2025-10-07 18:09:04]     "exeErrorCode": 0,
[2025-10-07 18:09:04]     "exeErrorDiag": "",
[2025-10-07 18:09:04]     "pilotErrorCode": 0,
[2025-10-07 18:09:04]     "pilotErrorDiag": "",
[2025-10-07 18:09:04]  *** Listing of results directory ***
[2025-10-07 18:09:04] total 387136
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc    552446 Oct  7 04:08 pilot3.tar.gz
[2025-10-07 18:09:04] -rwx------. 1 boinc boinc     36292 Oct  7 04:17 runpilot2-wrapper.sh
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc      5112 Oct  7 04:17 queuedata.json
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc       100 Oct  7 14:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 18:09:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 14:18 run_atlas
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc       105 Oct  7 14:18 job.xml
[2025-10-07 18:09:04] -rw-r--r--. 2 boinc boinc 214341755 Oct  7 14:18 EVNT.46376901._004669.pool.root.1
[2025-10-07 18:09:04] -rw-r--r--. 2 boinc boinc     15120 Oct  7 14:18 start_atlas.sh
[2025-10-07 18:09:04] drwxrwx--x. 2 boinc boinc        68 Oct  7 14:18 shared
[2025-10-07 18:09:04] -rw-r--r--. 2 boinc boinc    565606 Oct  7 14:18 input.tar.gz
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc         0 Oct  7 14:18 boinc_lockfile
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc      6390 Oct  7 14:18 init_data.xml
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc      2521 Oct  7 14:18 pandaJob.out
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc    975010 Oct  7 14:22 agis_schedconf.cvmfs.json
[2025-10-07 18:09:04] drwx------. 4 boinc boinc      4096 Oct  7 14:22 pilot3
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc 173727645 Oct  7 18:05 HITS.46376905._125660.pool.root.1
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc       531 Oct  7 18:06 boinc_task_state.xml
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc      1013 Oct  7 18:06 memory_monitor_summary.json
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc   1560401 Oct  7 18:06 agis_ddmendpoints.agis.ALL.json
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc    433740 Oct  7 18:06 log.46376905._125660.job.log.tgz.1
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc      7786 Oct  7 18:08 heartbeat.json
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc      8192 Oct  7 18:08 boinc_mmap_file
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc        28 Oct  7 18:08 wrapper_checkpoint.txt
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc        95 Oct  7 18:09 pilot_heartbeat.json
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc       890 Oct  7 18:09 pilotlog.txt
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc   1812413 Oct  7 18:09 log.46376905._125660.job.log.1
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc       357 Oct  7 18:09 output.list
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc       620 Oct  7 18:09 runtime_log
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc   2263040 Oct  7 18:09 result.tar.gz
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc      8703 Oct  7 18:09 runtime_log.err
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc       656 Oct  7 18:09 pATNDmeRCQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFlKMDmPTWUan.diag
[2025-10-07 18:09:04] -rw-r--r--. 1 boinc boinc     20628 Oct  7 18:09 stderr.txt
[2025-10-07 18:09:04] HITS file was successfully produced:
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc 173727645 Oct  7 18:05 shared/HITS.pool.root.1
[2025-10-07 18:09:04]  *** Contents of shared directory: ***
[2025-10-07 18:09:04] total 381760
[2025-10-07 18:09:04] -rw-r--r--. 2 boinc boinc 214341755 Oct  7 14:18 ATLAS.root_0
[2025-10-07 18:09:04] -rw-r--r--. 2 boinc boinc     15120 Oct  7 14:18 start_atlas.sh
[2025-10-07 18:09:04] -rw-r--r--. 2 boinc boinc    565606 Oct  7 14:18 input.tar.gz
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc 173727645 Oct  7 18:05 HITS.pool.root.1
[2025-10-07 18:09:04] -rw-------. 1 boinc boinc   2263040 Oct  7 18:09 result.tar.gz
18:09:05 (11975): run_atlas exited; CPU time 47837.381773
18:09:05 (11975): called boinc_finish(0)

</stderr_txt>
]]>

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