Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:26:49 (773794): wrapper (7.7.26015): starting
19:26:49 (773794): wrapper: running run_atlas (--nthreads 3)
[2025-10-07 19:26:49] Arguments: --nthreads 3
[2025-10-07 19:26:49] Threads: 3
[2025-10-07 19:26:49] Checking for CVMFS
[2025-10-07 19:26:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 19:26:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 19:26:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 19:26:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 19:26:50] 2.9.2.0 193215 1773 77648 151442 3 56 3086403 36864000 12 130560 0 1531330 99.991 61522 1472 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-07 19:26:50] CVMFS is ok
[2025-10-07 19:26:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 19:26:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 19:26:50] Further information can be found at the LHC@home message board.
[2025-10-07 19:26:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 19:26:50] Checking for apptainer binary...
[2025-10-07 19:26:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 19:26:50] Running /usr/bin/apptainer --version
[2025-10-07 19:26:50] apptainer version 1.4.1-1.1
[2025-10-07 19:26:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 19:26:50] thA383
[2025-10-07 19:26:50] apptainer works
[2025-10-07 19:26:50] Set ATHENA_PROC_NUMBER=3
[2025-10-07 19:26:50] Set ATHENA_CORE_NUMBER=3
[2025-10-07 19:26:50] Starting ATLAS job with PandaID=6829875385
[2025-10-07 19:26:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 20:41:06]  *** The last 200 lines of the pilot log: ***
[2025-10-07 20:41:06] 2025-10-07 18:40:13,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 20:41:06] 2025-10-07 18:40:13,709 | INFO     | ***************************************
[2025-10-07 20:41:06] 2025-10-07 18:40:13,709 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 20:41:06] 2025-10-07 18:40:13,709 | INFO     | ***************************************
[2025-10-07 20:41:06] 2025-10-07 18:40:13,709 | INFO     | 
[2025-10-07 20:41:06] 2025-10-07 18:40:13,709 | INFO     | architecture information:
[2025-10-07 20:41:06] 2025-10-07 18:40:13,710 | INFO     | executing command: cat /etc/os-release
[2025-10-07 20:41:06] 2025-10-07 18:40:13,718 | INFO     | cat /etc/os-release:
[2025-10-07 20:41:06] NAME="CentOS Linux"
[2025-10-07 20:41:06] VERSION="7 (Core)"
[2025-10-07 20:41:06] ID="centos"
[2025-10-07 20:41:06] ID_LIKE="rhel fedora"
[2025-10-07 20:41:06] VERSION_ID="7"
[2025-10-07 20:41:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 20:41:06] ANSI_COLOR="0;31"
[2025-10-07 20:41:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 20:41:06] HOME_URL="https://www.centos.org/"
[2025-10-07 20:41:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 20:41:06] 
[2025-10-07 20:41:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 20:41:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 20:41:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 20:41:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 20:41:06] 
[2025-10-07 20:41:06] 2025-10-07 18:40:13,718 | INFO     | ***************************************
[2025-10-07 20:41:06] 2025-10-07 18:40:14,222 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-07 20:41:06] 2025-10-07 18:40:14,235 | INFO     | sufficient remaining disk space (256739639296 B)
[2025-10-07 20:41:06] 2025-10-07 18:40:14,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 20:41:06] 2025-10-07 18:40:14,235 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 20:41:06] 2025-10-07 18:40:14,235 | INFO     | update_server=False
[2025-10-07 20:41:06] 2025-10-07 18:40:14,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 20:41:06] 2025-10-07 18:40:14,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 20:41:06] 2025-10-07 18:40:14,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 20:41:06] 2025-10-07 18:40:14,511 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 20:41:06] 2025-10-07 18:40:14,511 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 20:41:06] 2025-10-07 18:40:14,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 20:41:06] 2025-10-07 18:40:14,512 | INFO     | will abort loop
[2025-10-07 20:41:06] 2025-10-07 18:40:14,858 | INFO     | all payload control threads have been joined
[2025-10-07 20:41:06] 2025-10-07 18:40:14,982 | INFO     | all data control threads have been joined
[2025-10-07 20:41:06] 2025-10-07 18:40:15,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 20:41:06] 2025-10-07 18:40:15,194 | INFO     | all job control threads have been joined
[2025-10-07 20:41:06] 2025-10-07 18:40:15,241 | INFO     | [job] retrieve thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:15,241 | INFO     | [job] queue monitor thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:15,257 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:15,515 | INFO     | [job] job monitor thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:15,787 | INFO     | [payload] validate_post thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:15,859 | INFO     | [data] copytool_in thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:15,864 | INFO     | [payload] control thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:15,988 | INFO     | [data] control thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:16,199 | INFO     | [job] control thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:16,406 | INFO     | [job] validate thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:16,466 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:16,480 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:16,757 | INFO     | [payload] failed_post thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:17,074 | INFO     | [data] copytool_out thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:18,242 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:25,233 | INFO     | job.realtimelogging is not enabled
[2025-10-07 20:41:06] 2025-10-07 18:40:26,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 20:41:06] 2025-10-07 18:40:44,077 | INFO     | PID=777514 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 20:41:06] 2025-10-07 18:40:44,078 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 20:41:06] 2025-10-07 18:40:44,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 20:41:06] 2025-10-07 18:40:44,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 20:41:06] 2025-10-07 18:41:00,228 | INFO     | [monitor] cgroup control has ended
[2025-10-07 20:41:06] 2025-10-07 18:41:01,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139867944896320)>', '<ExcThread(monitor, started 139867598079744)>']
[2025-10-07 20:41:06] 2025-10-07 18:41:02,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 20:41:06] 2025-10-07 18:41:02,166 | INFO     | [monitor] control thread has ended
[2025-10-07 20:41:06] 2025-10-07 18:41:06,276 | INFO     | all workflow threads have been joined
[2025-10-07 20:41:06] 2025-10-07 18:41:06,277 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 20:41:06] 2025-10-07 18:41:06,277 | INFO     | traces error code: 0
[2025-10-07 20:41:06] 2025-10-07 18:41:06,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 20:41:06] 2025-10-07 18:41:06,329 [wrapper] ==== pilot stdout END ====
[2025-10-07 20:41:06] 2025-10-07 18:41:06,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 20:41:06] 2025-10-07 18:41:06,334 [wrapper] pilotpid: 777514
[2025-10-07 20:41:06] 2025-10-07 18:41:06,336 [wrapper] Pilot exit status: 0
[2025-10-07 20:41:06] 2025-10-07 18:41:06,343 [wrapper] pandaids: 6829875385
[2025-10-07 20:41:06] 2025-10-07 18:41:06,359 [wrapper] cleanup supervisor_pilot  793637 777515
[2025-10-07 20:41:06] 2025-10-07 18:41:06,362 [wrapper] Test setup, not cleaning
[2025-10-07 20:41:06] 2025-10-07 18:41:06,364 [wrapper] apfmon messages muted
[2025-10-07 20:41:06] 2025-10-07 18:41:06,366 [wrapper] ==== wrapper stdout END ====
[2025-10-07 20:41:06] 2025-10-07 18:41:06,369 [wrapper] ==== wrapper stderr END ====
[2025-10-07 20:41:06]  *** Error codes and diagnostics ***
[2025-10-07 20:41:06]     "exeErrorCode": 0,
[2025-10-07 20:41:06]     "exeErrorDiag": "",
[2025-10-07 20:41:06]     "pilotErrorCode": 0,
[2025-10-07 20:41:06]     "pilotErrorDiag": "",
[2025-10-07 20:41:06]  *** Listing of results directory ***
[2025-10-07 20:41:06] total 389824
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc    552446 Oct  4 19:03 pilot3.tar.gz
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc      5112 Oct  4 19:11 queuedata.json
[2025-10-07 20:41:06] -rwx------ 1 boinc boinc     36292 Oct  4 19:12 runpilot2-wrapper.sh
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc       100 Oct  7 19:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 20:41:06] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 19:26 run_atlas
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc       105 Oct  7 19:26 job.xml
[2025-10-07 20:41:06] -rw-r--r-- 2 boinc boinc 216732911 Oct  7 19:26 EVNT.46376901._002309.pool.root.1
[2025-10-07 20:41:06] -rw-r--r-- 2 boinc boinc    565603 Oct  7 19:26 input.tar.gz
[2025-10-07 20:41:06] -rw-r--r-- 2 boinc boinc     15120 Oct  7 19:26 start_atlas.sh
[2025-10-07 20:41:06] drwxrwx--x 2 boinc boinc      4096 Oct  7 19:26 shared
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc         0 Oct  7 19:26 boinc_setup_complete
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc      6437 Oct  7 19:26 init_data.xml
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc         0 Oct  7 19:26 boinc_lockfile
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc      2519 Oct  7 19:26 pandaJob.out
[2025-10-07 20:41:06] -rw------- 1 boinc boinc    977520 Oct  7 19:26 agis_schedconf.cvmfs.json
[2025-10-07 20:41:06] -rw------- 1 boinc boinc   1560401 Oct  7 19:26 agis_ddmendpoints.agis.ALL.json
[2025-10-07 20:41:06] drwx------ 4 boinc boinc      4096 Oct  7 19:26 pilot3
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc       529 Oct  7 20:39 boinc_task_state.xml
[2025-10-07 20:41:06] -rw------- 1 boinc boinc 176744940 Oct  7 20:39 HITS.46376905._063832.pool.root.1
[2025-10-07 20:41:06] -rw------- 1 boinc boinc      1031 Oct  7 20:40 memory_monitor_summary.json
[2025-10-07 20:41:06] -rw------- 1 boinc boinc    261364 Oct  7 20:40 log.46376905._063832.job.log.tgz.1
[2025-10-07 20:41:06] -rw------- 1 boinc boinc      7763 Oct  7 20:40 heartbeat.json
[2025-10-07 20:41:06] -rw------- 1 boinc boinc        95 Oct  7 20:40 pilot_heartbeat.json
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc        27 Oct  7 20:40 wrapper_checkpoint.txt
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc      8192 Oct  7 20:40 boinc_mmap_file
[2025-10-07 20:41:06] -rw------- 1 boinc boinc      5009 Oct  7 20:41 pilotlog.txt
[2025-10-07 20:41:06] -rw------- 1 boinc boinc    647702 Oct  7 20:41 log.46376905._063832.job.log.1
[2025-10-07 20:41:06] -rw------- 1 boinc boinc       357 Oct  7 20:41 output.list
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc       620 Oct  7 20:41 runtime_log
[2025-10-07 20:41:06] -rw------- 1 boinc boinc    931840 Oct  7 20:41 result.tar.gz
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc      8777 Oct  7 20:41 runtime_log.err
[2025-10-07 20:41:06] -rw------- 1 boinc boinc       658 Oct  7 20:41 6ftNDm6yKP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmg4LNDmOK9mcm.diag
[2025-10-07 20:41:06] -rw-r--r-- 1 boinc boinc      9767 Oct  7 20:41 stderr.txt
[2025-10-07 20:41:06] HITS file was successfully produced:
[2025-10-07 20:41:06] -rw------- 1 boinc boinc 176744940 Oct  7 20:39 shared/HITS.pool.root.1
[2025-10-07 20:41:06]  *** Contents of shared directory: ***
[2025-10-07 20:41:06] total 385752
[2025-10-07 20:41:06] -rw-r--r-- 2 boinc boinc 216732911 Oct  7 19:26 ATLAS.root_0
[2025-10-07 20:41:06] -rw-r--r-- 2 boinc boinc    565603 Oct  7 19:26 input.tar.gz
[2025-10-07 20:41:06] -rw-r--r-- 2 boinc boinc     15120 Oct  7 19:26 start_atlas.sh
[2025-10-07 20:41:06] -rw------- 1 boinc boinc 176744940 Oct  7 20:39 HITS.pool.root.1
[2025-10-07 20:41:06] -rw------- 1 boinc boinc    931840 Oct  7 20:41 result.tar.gz
20:41:07 (773794): run_atlas exited; CPU time 12507.740905
20:41:07 (773794): called boinc_finish(0)

</stderr_txt>
]]>

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