Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:45:26 (2485866): wrapper (7.7.26015): starting
20:45:26 (2485866): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 20:45:26] Arguments: --nthreads 12
[2025-10-06 20:45:26] Threads: 12
[2025-10-06 20:45:26] Checking for CVMFS
[2025-10-06 20:45:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 20:45:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 20:45:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 20:45:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 20:45:27] 2.11.5.0 2762 23732 178548 151422 1 418 44041737 45568000 23302 130560 0 251369642 99.871 95989671 29462 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 20:45:27] CVMFS is ok
[2025-10-06 20:45:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 20:45:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 20:45:27] Further information can be found at the LHC@home message board.
[2025-10-06 20:45:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 20:45:27] Checking for apptainer binary...
[2025-10-06 20:45:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 20:45:27] Running /usr/bin/apptainer --version
[2025-10-06 20:45:27] apptainer version 1.4.1-1.el9
[2025-10-06 20:45:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 20:45:27] wns0091.triumf.lcg
[2025-10-06 20:45:27] apptainer works
[2025-10-06 20:45:27] Set ATHENA_PROC_NUMBER=12
[2025-10-06 20:45:27] Set ATHENA_CORE_NUMBER=12
[2025-10-06 20:45:27] Starting ATLAS job with PandaID=6833161137
[2025-10-06 20:45:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 20:49:54]  *** The last 200 lines of the pilot log: ***
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | WARNING  | wrong length of table data, x=[1759808788.0], y=[1921.0] (must be same and length>=4)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | could have reported an average CPU frequency of 2764 MHz (4 samples)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | ..............................
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . Timing measurements:
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . get job = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . initial setup = 3 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . payload setup = 10 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . stage-in = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . payload execution = 35 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . stage-out = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . log creation = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | ..............................
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833161137/pilotlog.txt
[2025-10-06 20:49:54] 2025-10-07 03:49:05,080 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 20:49:54] - Log from pilotlog.txt -
[2025-10-06 20:49:54] 2025-10-07 03:49:05,050 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6833161137/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | INFO     | extracted standard info from prmon json
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | WARNING  | wrong length of table data, x=[1759808788.0], y=[1921.0] (must be same and length>=4)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | could have reported an average CPU frequency of 2764 MHz (4 samples)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | ..............................
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . Timing measurements:
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . get job = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . initial setup = 3 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . payload setup = 10 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . stage-in = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . payload execution = 35 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . stage-out = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . log creation = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | ..............................
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833161137/pilotlog.txt
[2025-10-06 20:49:54] 2025-10-07 03:49:05,080 | WARNING  | 
[2025-10-06 20:49:54] [begin log extracts]
[2025-10-06 20:49:54] - Log from pilotlog.txt -
[2025-10-06 20:49:54] 2025-10-07 03:49:05,050 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6833161137/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | INFO     | extracted standard info from prmon json
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 20:49:54] 2025-10-07 03:49:05,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | WARNING  | wrong length of table data, x=[1759808788.0], y=[1921.0] (must be same and length>=4)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | could have reported an average CPU frequency of 2764 MHz (4 samples)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | ..............................
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . Timing measurements:
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . get job = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . initial setup = 3 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,053 | INFO     | . payload setup = 10 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . stage-in = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . payload execution = 35 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . stage-out = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | . log creation = 0 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | ..............................
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 20:49:54] 2025-10-07 03:49:05,054 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833161137/pilotlog.txt
[2025-10-06 20:49:54] [end log extracts]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,080 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,081 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 20:49:54] 2025-10-07 03:49:05,440 | INFO     | 
[2025-10-06 20:49:54] 2025-10-07 03:49:05,440 | INFO     | job summary report
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | --------------------------------------------------
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | PanDA job id: 6833161137
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | task id: 46376905
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 20:46:46,653 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | pilot state: failed 
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | transexitcode: 65
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | exeerrorcode: 65
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | exitcode: 65
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | cpuconsumptiontime: 18 s
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | nevents: 0
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | neventsw: 0
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | pid: 2506005
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | pgrp: 2506005
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | corecount: 12
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | event service: False
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | sizes: {0: 2348817, 9: 2349079, 11: 2349107, 50: 2372386, 52: 2376706, 178: 2376904}
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | --------------------------------------------------
[2025-10-06 20:49:54] 2025-10-07 03:49:05,441 | INFO     | 
[2025-10-06 20:49:54] 2025-10-07 03:49:05,442 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,565 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,565 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 20:49:54] 2025-10-07 03:49:05,565 | INFO     | job 6833161137 has completed (purged errors)
[2025-10-06 20:49:54] 2025-10-07 03:49:05,565 | INFO     | overall cleanup function is called
[2025-10-06 20:49:54] 2025-10-07 03:49:06,571 | INFO     | --- collectZombieJob: --- 10, [2506005]
[2025-10-06 20:49:54] 2025-10-07 03:49:06,571 | INFO     | zombie collector waiting for pid 2506005
[2025-10-06 20:49:54] 2025-10-07 03:49:06,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 20:49:54] 2025-10-07 03:49:06,572 | INFO     | collected zombie processes
[2025-10-06 20:49:54] 2025-10-07 03:49:06,572 | INFO     | will attempt to kill all subprocesses of pid=2506005
[2025-10-06 20:49:54] 2025-10-07 03:49:07,628 | INFO     | process IDs to be killed: [2506005] (in reverse order)
[2025-10-06 20:49:54] 2025-10-07 03:49:07,836 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 20:49:54] 2025-10-07 03:49:07,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 20:49:54] 2025-10-07 03:49:07,847 | INFO     | did not find any defunct processes belonging to 2506005
[2025-10-06 20:49:54] 2025-10-07 03:49:07,857 | INFO     | did not find any defunct processes belonging to 2506005
[2025-10-06 20:49:54] 2025-10-07 03:49:07,857 | INFO     | ready for new job
[2025-10-06 20:49:54] 2025-10-07 03:49:07,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 20:49:54] 2025-10-07 03:49:07,858 | INFO     | ***************************************
[2025-10-06 20:49:54] 2025-10-07 03:49:07,858 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 20:49:54] 2025-10-07 03:49:07,858 | INFO     | ***************************************
[2025-10-06 20:49:54] 2025-10-07 03:49:07,859 | INFO     | 
[2025-10-06 20:49:54] 2025-10-07 03:49:07,860 | INFO     | architecture information:
[2025-10-06 20:49:54] 2025-10-07 03:49:07,861 | INFO     | executing command: cat /etc/os-release
[2025-10-06 20:49:54] 2025-10-07 03:49:07,873 | INFO     | cat /etc/os-release:
[2025-10-06 20:49:54] NAME="CentOS Linux"
[2025-10-06 20:49:54] VERSION="7 (Core)"
[2025-10-06 20:49:54] ID="centos"
[2025-10-06 20:49:54] ID_LIKE="rhel fedora"
[2025-10-06 20:49:54] VERSION_ID="7"
[2025-10-06 20:49:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 20:49:54] ANSI_COLOR="0;31"
[2025-10-06 20:49:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 20:49:54] HOME_URL="https://www.centos.org/"
[2025-10-06 20:49:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 20:49:54] 
[2025-10-06 20:49:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 20:49:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 20:49:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 20:49:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 20:49:54] 
[2025-10-06 20:49:54] 2025-10-07 03:49:07,873 | INFO     | ***************************************
[2025-10-06 20:49:54] 2025-10-07 03:49:08,380 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 20:49:54] 2025-10-07 03:49:08,407 | INFO     | sufficient remaining disk space (2049796210688 B)
[2025-10-06 20:49:54] 2025-10-07 03:49:08,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 20:49:54] 2025-10-07 03:49:08,407 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 20:49:54] 2025-10-07 03:49:08,407 | INFO     | update_server=False
[2025-10-06 20:49:54] 2025-10-07 03:49:08,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 20:49:54] 2025-10-07 03:49:08,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 20:49:54] 2025-10-07 03:49:08,408 | INFO     | aborting loop
[2025-10-06 20:49:54] 2025-10-07 03:49:08,493 | INFO     | all job control threads have been joined
[2025-10-06 20:49:54] 2025-10-07 03:49:09,038 | INFO     | all payload control threads have been joined
[2025-10-06 20:49:54] 2025-10-07 03:49:09,413 | INFO     | [job] retrieve thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:09,414 | INFO     | [job] job monitor thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:09,444 | INFO     | [job] validate thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:09,471 | INFO     | [payload] validate_post thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:09,487 | INFO     | all data control threads have been joined
[2025-10-06 20:49:54] 2025-10-07 03:49:09,498 | INFO     | [job] control thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:09,522 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 20:49:54] 2025-10-07 03:49:09,577 | INFO     | [data] copytool_in thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:09,704 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:09,775 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:09,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:10,044 | INFO     | [payload] control thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:10,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 20:49:54] 2025-10-07 03:49:10,256 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:10,363 | INFO     | [payload] failed_post thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:10,495 | INFO     | [data] control thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:11,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 20:49:54] 2025-10-07 03:49:11,200 | INFO     | [job] queue monitor thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:11,529 | INFO     | [data] copytool_out thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:15,204 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 20:49:54] 2025-10-07 03:49:38,410 | INFO     | PID=2495983 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 20:49:54] 2025-10-07 03:49:38,410 | INFO     | .. there are 42 such processes running
[2025-10-06 20:49:54] 2025-10-07 03:49:38,410 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 20:49:54] 2025-10-07 03:49:38,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 20:49:54] 2025-10-07 03:49:38,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 20:49:54] 2025-10-07 03:49:47,839 | INFO     | [monitor] cgroup control has ended
[2025-10-06 20:49:54] 2025-10-07 03:49:48,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632303245120)>', '<ExcThread(monitor, started 139631911749376)>']
[2025-10-06 20:49:54] 2025-10-07 03:49:49,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 20:49:54] 2025-10-07 03:49:49,479 | INFO     | [monitor] control thread has ended
[2025-10-06 20:49:54] 2025-10-07 03:49:53,604 | INFO     | all workflow threads have been joined
[2025-10-06 20:49:54] 2025-10-07 03:49:53,605 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 20:49:54] 2025-10-07 03:49:53,605 | INFO     | traces error code: 0
[2025-10-06 20:49:54] 2025-10-07 03:49:53,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 20:49:54] 2025-10-07 03:49:53,773 [wrapper] ==== pilot stdout END ====
[2025-10-06 20:49:54] 2025-10-07 03:49:53,775 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 20:49:54] 2025-10-07 03:49:53,777 [wrapper] pilotpid: 2495983
[2025-10-06 20:49:54] 2025-10-07 03:49:53,779 [wrapper] Pilot exit status: 0
[2025-10-06 20:49:54] 2025-10-07 03:49:53,869 [wrapper] pandaids: 6833161137
[2025-10-06 20:49:54] 2025-10-07 03:49:53,944 [wrapper] cleanup supervisor_pilot 2496035 2495984
[2025-10-06 20:49:54] 2025-10-07 03:49:53,953 [wrapper] Test setup, not cleaning
[2025-10-06 20:49:54] 2025-10-07 03:49:53,970 [wrapper] apfmon messages muted
[2025-10-06 20:49:54] 2025-10-07 03:49:53,993 [wrapper] ==== wrapper stdout END ====
[2025-10-06 20:49:54] 2025-10-07 03:49:54,021 [wrapper] ==== wrapper stderr END ====
[2025-10-06 20:49:54]  *** Error codes and diagnostics ***
[2025-10-06 20:49:54]     "exeErrorCode": 65,
[2025-10-06 20:49:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 20:49:54]     "pilotErrorCode": 1305,
[2025-10-06 20:49:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 20:49:54]  *** Listing of results directory ***
[2025-10-06 20:49:54] total 211260
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc    552446 Oct  6 18:08 pilot3.tar.gz
[2025-10-06 20:49:54] -rwx------. 1 boinc boinc     36292 Oct  6 18:36 runpilot2-wrapper.sh
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc      5112 Oct  6 18:36 queuedata.json
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc       100 Oct  6 20:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 20:49:54] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 20:45 run_atlas
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc       105 Oct  6 20:45 job.xml
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc      6594 Oct  6 20:45 init_data.xml
[2025-10-06 20:49:54] -rw-r--r--. 2 boinc boinc 212217053 Oct  6 20:45 EVNT.46376901._004643.pool.root.1
[2025-10-06 20:49:54] -rw-r--r--. 2 boinc boinc     15120 Oct  6 20:45 start_atlas.sh
[2025-10-06 20:49:54] drwxrwx--x. 2 boinc boinc      4096 Oct  6 20:45 shared
[2025-10-06 20:49:54] -rw-r--r--. 2 boinc boinc    565596 Oct  6 20:45 input.tar.gz
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc         0 Oct  6 20:45 boinc_lockfile
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc      2521 Oct  6 20:45 pandaJob.out
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc    974984 Oct  6 20:45 agis_schedconf.cvmfs.json
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc   1560401 Oct  6 20:45 agis_ddmendpoints.agis.ALL.json
[2025-10-06 20:49:54] drwx------. 4 boinc boinc      4096 Oct  6 20:45 pilot3
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc       953 Oct  6 20:46 memory_monitor_summary.json
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc     21534 Oct  6 20:46 log.46376905._125009.job.log.tgz.1
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc        95 Oct  6 20:48 pilot_heartbeat.json
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc      8401 Oct  6 20:49 heartbeat.json
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc       523 Oct  6 20:49 boinc_task_state.xml
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc      8192 Oct  6 20:49 boinc_mmap_file
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc        22 Oct  6 20:49 wrapper_checkpoint.txt
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc      4823 Oct  6 20:49 pilotlog.txt
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc     87169 Oct  6 20:49 log.46376905._125009.job.log.1
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc       188 Oct  6 20:49 output.list
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc       620 Oct  6 20:49 runtime_log
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc    133120 Oct  6 20:49 result.tar.gz
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc      8528 Oct  6 20:49 runtime_log.err
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc       645 Oct  6 20:49 NitNDmJoBQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJaVNDmGxZXRm.diag
[2025-10-06 20:49:54] -rw-r--r--. 1 boinc boinc     21763 Oct  6 20:49 stderr.txt
[2025-10-06 20:49:54] No HITS result produced
[2025-10-06 20:49:54]  *** Contents of shared directory: ***
[2025-10-06 20:49:54] total 207952
[2025-10-06 20:49:54] -rw-r--r--. 2 boinc boinc 212217053 Oct  6 20:45 ATLAS.root_0
[2025-10-06 20:49:54] -rw-r--r--. 2 boinc boinc     15120 Oct  6 20:45 start_atlas.sh
[2025-10-06 20:49:54] -rw-r--r--. 2 boinc boinc    565596 Oct  6 20:45 input.tar.gz
[2025-10-06 20:49:54] -rw-------. 1 boinc boinc    133120 Oct  6 20:49 result.tar.gz
20:49:55 (2485866): run_atlas exited; CPU time 25.344576
20:49:55 (2485866): called boinc_finish(0)

</stderr_txt>
]]>

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